RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 INAFM2P0DMQ5 153 aa9.93□□□□□ -0.82
USP39-205ENST00000442708 PRR3P79522 188 aaKnown RBP9.93□□□□□ -0.82
USP39-205ENST00000442708 TTTY13Q9BZ97 58 aa9.93□□□□□ -0.82
USP39-205ENST00000442708 PLA2G2DQ9UNK4 145 aa9.93□□□□□ -0.82
USP39-205ENST00000442708 C22orf24Q9Y442 160 aa9.93□□□□□ -0.82
USP39-205ENST00000442708 NMUP48645 174 aa9.92□□□□□ -0.82
USP39-205ENST00000442708 ANKRD39Q53RE8 183 aa9.92□□□□□ -0.82
USP39-205ENST00000442708 MEIG1Q5JSS6 88 aa9.92□□□□□ -0.82
USP39-205ENST00000442708 PKHD1L1Q86WI1 4243 aa9.91□□□□□ -0.82
USP39-205ENST00000442708 HERC1Q15751 4861 aa9.91□□□□□ -0.82
USP39-205ENST00000442708 VPREB1P12018 145 aa9.9□□□□□ -0.82
USP39-205ENST00000442708 MIR7-3HGQ8N6C7 128 aa9.9□□□□□ -0.82
USP39-205ENST00000442708 PSORS1C2Q9UIG4 136 aa9.9□□□□□ -0.82
USP39-205ENST00000442708 FLG2Q5D862 2391 aaPredicted RBP9.89□□□□□ -0.83
USP39-205ENST00000442708 IGLV5-37A0A075B6J1 123 aa9.89□□□□□ -0.83
USP39-205ENST00000442708 A0A0J9YXY3 114 aa9.89□□□□□ -0.83
USP39-205ENST00000442708 DAND5Q8N907 189 aa9.89□□□□□ -0.83
USP39-205ENST00000442708 TMA7Q9Y2S6 64 aaKnown RBP9.89□□□□□ -0.83
USP39-205ENST00000442708 MRPL55Q7Z7F7 128 aaKnown RBP9.88□□□□□ -0.83
USP39-205ENST00000442708 TP73-AS1Q9UF72 201 aa9.88□□□□□ -0.83
USP39-205ENST00000442708 LINC00587B1AMM8 73 aa9.87□□□□□ -0.83
USP39-205ENST00000442708 ADAMTSL4-AS1Q5T5F5 129 aa9.87□□□□□ -0.83
USP39-205ENST00000442708 LINC00167Q96N53 147 aa9.87□□□□□ -0.83
USP39-205ENST00000442708 GAGE10A6NGK3 116 aa9.86□□□□□ -0.83
USP39-205ENST00000442708 ZNF815PA8K554 130 aa9.86□□□□□ -0.83
USP39-205ENST00000442708 AKR1D1P51857 326 aa9.86□□□□□ -0.83
USP39-205ENST00000442708 UBE2BP63146 152 aa9.86□□□□□ -0.83
USP39-205ENST00000442708 LITAFQ99732 161 aa9.86□□□□□ -0.83
USP39-205ENST00000442708 RPL37AP8A6NKH3 93 aa9.85□□□□□ -0.83
USP39-205ENST00000442708 EIF4EBP3O60516 100 aaPredicted RBP9.85□□□□□ -0.83
USP39-205ENST00000442708 SCGB1D1O95968 90 aa9.84□□□□□ -0.83
USP39-205ENST00000442708 LBHQ53QV2 105 aaPredicted RBP9.84□□□□□ -0.83
USP39-205ENST00000442708 C1orf137Q5JT78 98 aa9.84□□□□□ -0.83
USP39-205ENST00000442708 PCP2Q8IVA1 136 aa9.84□□□□□ -0.83
USP39-205ENST00000442708 NKAPP1Q8N9T2 125 aa9.84□□□□□ -0.83
USP39-205ENST00000442708 MYCBP2O75592 4640 aa9.83□□□□□ -0.84
USP39-205ENST00000442708 SOSTDC1Q6X4U4 206 aa9.83□□□□□ -0.84
USP39-205ENST00000442708 BOD1L2Q8IYS8 172 aa9.83□□□□□ -0.84
USP39-205ENST00000442708 LOC107984156A0A0G2JMH3 177 aa9.82□□□□□ -0.84
USP39-205ENST00000442708 RPL24P83731 157 aaKnown RBP9.82□□□□□ -0.84
USP39-205ENST00000442708 SRSF9Q13242 221 aaKnown RBP eCLIP9.82□□□□□ -0.84
USP39-205ENST00000442708 ARL17AQ8IVW1 177 aa9.82□□□□□ -0.84
USP39-205ENST00000442708 TIMM17BO60830 172 aa9.8□□□□□ -0.84
USP39-205ENST00000442708 NPC2P61916 151 aa9.8□□□□□ -0.84
USP39-205ENST00000442708 IGLV1-50A0A075B6I6 118 aa9.79□□□□□ -0.84
USP39-205ENST00000442708 IGKV2-28A0A075B6P5 120 aa9.79□□□□□ -0.84
USP39-205ENST00000442708 NCR3O14931 201 aa9.79□□□□□ -0.84
USP39-205ENST00000442708 IGKV2D-28P01615 120 aa9.79□□□□□ -0.84
USP39-205ENST00000442708 IGLV7-43P04211 117 aa9.79□□□□□ -0.84
USP39-205ENST00000442708 M0R378 163 aa9.78□□□□□ -0.84
USP39-205ENST00000442708 HSBP1L1C9JCN9 74 aa9.77□□□□□ -0.85
USP39-205ENST00000442708 JOSD1Q15040 202 aaPredicted RBP9.77□□□□□ -0.85
USP39-205ENST00000442708 LRP1Q07954 4544 aaKnown RBP9.77□□□□□ -0.85
USP39-205ENST00000442708 SPINK6Q6UWN8 80 aa9.76□□□□□ -0.85
USP39-205ENST00000442708 LINC00308Q8TCZ7 52 aa9.76□□□□□ -0.85
USP39-205ENST00000442708 TMEM238C9JI98 176 aa9.75□□□□□ -0.85
USP39-205ENST00000442708 SCGB1D4Q6XE38 83 aa9.75□□□□□ -0.85
USP39-205ENST00000442708 FAT3Q8TDW7 4589 aa9.74□□□□□ -0.85
USP39-205ENST00000442708 MIEN1Q9BRT3 115 aa9.74□□□□□ -0.85
USP39-205ENST00000442708 BCE1O60756 84 aa9.73□□□□□ -0.85
USP39-205ENST00000442708 NDUFC2O95298 119 aa9.73□□□□□ -0.85
USP39-205ENST00000442708 SPANXDQ9BXN6 97 aa9.73□□□□□ -0.85
USP39-205ENST00000442708 SPANXCQ9NY87 97 aa9.73□□□□□ -0.85
USP39-205ENST00000442708 KRTAP29-1A8MX34 341 aaPredicted RBP9.72□□□□□ -0.85
USP39-205ENST00000442708 PYY3Q5JQD4 70 aa9.72□□□□□ -0.85
USP39-205ENST00000442708 TMEM126AQ9H061 195 aa9.72□□□□□ -0.85
USP39-205ENST00000442708 TRBV10-3A0A0K0K1G6 114 aa9.71□□□□□ -0.86
USP39-205ENST00000442708 TRBV10-2A0A0K0K1G8 114 aa9.71□□□□□ -0.86
USP39-205ENST00000442708 REG3GQ6UW15 175 aa9.71□□□□□ -0.86
USP39-205ENST00000442708 KRTAP13-1Q8IUC0 172 aa9.71□□□□□ -0.86
USP39-205ENST00000442708 SPANXB1Q9NS25 103 aaPredicted RBP9.71□□□□□ -0.86
USP39-205ENST00000442708 PAM16Q9Y3D7 125 aa9.71□□□□□ -0.86
USP39-205ENST00000442708 ZNF861PO60384 105 aa9.7□□□□□ -0.86
USP39-205ENST00000442708 H0Y9J4 135 aa9.69□□□□□ -0.86
USP39-205ENST00000442708 COX8AP10176 69 aa9.69□□□□□ -0.86
USP39-205ENST00000442708 SPATA45Q537H7 98 aa9.69□□□□□ -0.86
USP39-205ENST00000442708 OXTP01178 125 aa9.68□□□□□ -0.86
USP39-205ENST00000442708 MUSTN1Q8IVN3 82 aa9.68□□□□□ -0.86
USP39-205ENST00000442708 DIRC1Q969H9 104 aa9.68□□□□□ -0.86
USP39-205ENST00000442708 C14orf144Q96I85 54 aa9.68□□□□□ -0.86
USP39-205ENST00000442708 VAMP8Q9BV40 100 aa9.68□□□□□ -0.86
USP39-205ENST00000442708 KCNQ1DNQ9H478 68 aa9.68□□□□□ -0.86
USP39-205ENST00000442708 PRYO14603 147 aa9.67□□□□□ -0.86
USP39-205ENST00000442708 IGLV6-57P01721 117 aa9.67□□□□□ -0.86
USP39-205ENST00000442708 DDTP30046 118 aa9.67□□□□□ -0.86
USP39-205ENST00000442708 DMBT1Q9UGM3 2413 aaPredicted RBP9.66□□□□□ -0.86
USP39-205ENST00000442708 MT1HL1P0DM35 61 aa9.66□□□□□ -0.86
USP39-205ENST00000442708 IFITM1P13164 125 aa9.66□□□□□ -0.86
USP39-205ENST00000442708 SPRR1AP35321 89 aa9.66□□□□□ -0.86
USP39-205ENST00000442708 RPL28P46779 137 aaKnown RBP9.66□□□□□ -0.86
USP39-205ENST00000442708 UBE2AP49459 152 aa9.66□□□□□ -0.86
USP39-205ENST00000442708 PRLHP81277 87 aa9.66□□□□□ -0.86
USP39-205ENST00000442708 FAM19A1Q7Z5A9 133 aa9.66□□□□□ -0.86
USP39-205ENST00000442708 KRTAP4-16G5E9R7 235 aaPredicted RBP9.65□□□□□ -0.86
USP39-205ENST00000442708 DLEU1O43261 78 aa9.65□□□□□ -0.86
USP39-205ENST00000442708 Q6ZVH6 145 aa9.65□□□□□ -0.86
USP39-205ENST00000442708 LINC01600Q96MT4 127 aa9.65□□□□□ -0.86
USP39-205ENST00000442708 PPDPFQ9H3Y8 114 aa9.65□□□□□ -0.86
USP39-205ENST00000442708 KRTAP1-4P0C5Y4 121 aa9.64□□□□□ -0.87
USP39-205ENST00000442708 S100A7L2Q5SY68 101 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms