RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 KRTAP11-1Q8IUC1 163 aa13.91□□□□□ -0.18
CNOT3-203ENST00000440571 SMIM13P0DJ93 91 aa13.9□□□□□ -0.18
CNOT3-203ENST00000440571 MRPL55Q7Z7F7 128 aaKnown RBP13.9□□□□□ -0.18
CNOT3-203ENST00000440571 E9PLD3 99 aa13.89□□□□□ -0.19
CNOT3-203ENST00000440571 C20orf202A1L168 122 aa13.88□□□□□ -0.19
CNOT3-203ENST00000440571 S100A2P29034 98 aa13.88□□□□□ -0.19
CNOT3-203ENST00000440571 NMUP48645 174 aa13.88□□□□□ -0.19
CNOT3-203ENST00000440571 NKAPP1Q8N9T2 125 aa13.88□□□□□ -0.19
CNOT3-203ENST00000440571 IGLV5-37A0A075B6J1 123 aa13.87□□□□□ -0.19
CNOT3-203ENST00000440571 KRTAP29-1A8MX34 341 aaPredicted RBP13.87□□□□□ -0.19
CNOT3-203ENST00000440571 RPL24P83731 157 aaKnown RBP13.87□□□□□ -0.19
CNOT3-203ENST00000440571 SRSF9Q13242 221 aaKnown RBP eCLIP13.87□□□□□ -0.19
CNOT3-203ENST00000440571 SPINK6Q6UWN8 80 aa13.87□□□□□ -0.19
CNOT3-203ENST00000440571 HIST3H2BBQ8N257 126 aa13.87□□□□□ -0.19
CNOT3-203ENST00000440571 OXTP01178 125 aa13.86□□□□□ -0.19
CNOT3-203ENST00000440571 LINC00167Q96N53 147 aa13.86□□□□□ -0.19
CNOT3-203ENST00000440571 J3QL48 77 aa13.85□□□□□ -0.19
CNOT3-203ENST00000440571 MYCBP2O75592 4640 aa13.85□□□□□ -0.19
CNOT3-203ENST00000440571 GAGE10A6NGK3 116 aa13.84□□□□□ -0.19
CNOT3-203ENST00000440571 MIR7-3HGQ8N6C7 128 aa13.84□□□□□ -0.19
CNOT3-203ENST00000440571 RPL37AP8A6NKH3 93 aa13.83□□□□□ -0.2
CNOT3-203ENST00000440571 IGLV7-43P04211 117 aa13.83□□□□□ -0.2
CNOT3-203ENST00000440571 VPREB1P12018 145 aa13.83□□□□□ -0.2
CNOT3-203ENST00000440571 HIST1H2BLQ99880 126 aa13.82□□□□□ -0.2
CNOT3-203ENST00000440571 PKHD1L1Q86WI1 4243 aa13.81□□□□□ -0.2
CNOT3-203ENST00000440571 AKR1D1P51857 326 aa13.8□□□□□ -0.2
CNOT3-203ENST00000440571 SNRPEP62304 92 aaKnown RBP13.8□□□□□ -0.2
CNOT3-203ENST00000440571 REG3GQ6UW15 175 aa13.77□□□□□ -0.21
CNOT3-203ENST00000440571 BOD1L2Q8IYS8 172 aa13.77□□□□□ -0.21
CNOT3-203ENST00000440571 Q8NDZ9 215 aa13.77□□□□□ -0.21
CNOT3-203ENST00000440571 A0A0J9YXY3 114 aa13.76□□□□□ -0.21
CNOT3-203ENST00000440571 ATOH7Q8N100 152 aa13.76□□□□□ -0.21
CNOT3-203ENST00000440571 DAND5Q8N907 189 aa13.76□□□□□ -0.21
CNOT3-203ENST00000440571 IGKV2D-26A0A0A0MRZ7 120 aa13.75□□□□□ -0.21
CNOT3-203ENST00000440571 DIRC1Q969H9 104 aa13.75□□□□□ -0.21
CNOT3-203ENST00000440571 IGKV2-28A0A075B6P5 120 aa13.74□□□□□ -0.21
CNOT3-203ENST00000440571 IGKV2D-28P01615 120 aa13.74□□□□□ -0.21
CNOT3-203ENST00000440571 IGLV1-50A0A075B6I6 118 aa13.73□□□□□ -0.21
CNOT3-203ENST00000440571 C5orf52A6NGY3 159 aa13.73□□□□□ -0.21
CNOT3-203ENST00000440571 ZNF815PA8K554 130 aa13.73□□□□□ -0.21
CNOT3-203ENST00000440571 M0R378 163 aa13.73□□□□□ -0.21
CNOT3-203ENST00000440571 BCE1O60756 84 aa13.73□□□□□ -0.21
CNOT3-203ENST00000440571 LRP1Q07954 4544 aaKnown RBP13.73□□□□□ -0.21
CNOT3-203ENST00000440571 LOC107984156A0A0G2JMH3 177 aa13.71□□□□□ -0.21
CNOT3-203ENST00000440571 ZNF861PO60384 105 aa13.71□□□□□ -0.21
CNOT3-203ENST00000440571 ARL17AQ8IVW1 177 aa13.71□□□□□ -0.21
CNOT3-203ENST00000440571 MIEN1Q9BRT3 115 aa13.71□□□□□ -0.21
CNOT3-203ENST00000440571 FAT3Q8TDW7 4589 aa13.7□□□□□ -0.22
CNOT3-203ENST00000440571 ANKRD39Q53RE8 183 aa13.7□□□□□ -0.22
CNOT3-203ENST00000440571 ADAMTSL4-AS1Q5T5F5 129 aa13.7□□□□□ -0.22
CNOT3-203ENST00000440571 TTTY13Q9BZ97 58 aa13.7□□□□□ -0.22
CNOT3-203ENST00000440571 LINC01600Q96MT4 127 aa13.69□□□□□ -0.22
CNOT3-203ENST00000440571 DMBT1Q9UGM3 2413 aaPredicted RBP13.69□□□□□ -0.22
CNOT3-203ENST00000440571 H0Y9J4 135 aa13.68□□□□□ -0.22
CNOT3-203ENST00000440571 NCR3O14931 201 aa13.68□□□□□ -0.22
CNOT3-203ENST00000440571 TIMM17BO60830 172 aa13.67□□□□□ -0.22
CNOT3-203ENST00000440571 RPL28P46779 137 aaKnown RBP13.67□□□□□ -0.22
CNOT3-203ENST00000440571 TMEM238C9JI98 176 aa13.65□□□□□ -0.22
CNOT3-203ENST00000440571 UBE2AP49459 152 aa13.65□□□□□ -0.22
CNOT3-203ENST00000440571 NPC2P61916 151 aa13.65□□□□□ -0.22
CNOT3-203ENST00000440571 TMEM126AQ9H061 195 aa13.65□□□□□ -0.22
CNOT3-203ENST00000440571 HSBP1L1C9JCN9 74 aa13.64□□□□□ -0.23
CNOT3-203ENST00000440571 SCGB1D1O95968 90 aa13.64□□□□□ -0.23
CNOT3-203ENST00000440571 MT1HL1P0DM35 61 aa13.63□□□□□ -0.23
CNOT3-203ENST00000440571 SCGB1D4Q6XE38 83 aa13.63□□□□□ -0.23
CNOT3-203ENST00000440571 LITAFQ99732 161 aa13.63□□□□□ -0.23
CNOT3-203ENST00000440571 NDUFC2O95298 119 aa13.62□□□□□ -0.23
CNOT3-203ENST00000440571 SOSTDC1Q6X4U4 206 aa13.62□□□□□ -0.23
CNOT3-203ENST00000440571 TRBV10-2A0A0K0K1G8 114 aa13.61□□□□□ -0.23
CNOT3-203ENST00000440571 FAM19A1Q7Z5A9 133 aa13.61□□□□□ -0.23
CNOT3-203ENST00000440571 PCP2Q8IVA1 136 aa13.61□□□□□ -0.23
CNOT3-203ENST00000440571 EIF4EBP3O60516 100 aaPredicted RBP13.6□□□□□ -0.23
CNOT3-203ENST00000440571 LINC00308Q8TCZ7 52 aa13.6□□□□□ -0.23
CNOT3-203ENST00000440571 SPANXB1Q9NS25 103 aaPredicted RBP13.6□□□□□ -0.23
CNOT3-203ENST00000440571 TRBV10-3A0A0K0K1G6 114 aa13.58□□□□□ -0.24
CNOT3-203ENST00000440571 S100A12P80511 92 aa13.58□□□□□ -0.24
CNOT3-203ENST00000440571 KRTAP13-1Q8IUC0 172 aa13.58□□□□□ -0.24
CNOT3-203ENST00000440571 KCNQ1DNQ9H478 68 aa13.58□□□□□ -0.24
CNOT3-203ENST00000440571 HERC1Q15751 4861 aa13.57□□□□□ -0.24
CNOT3-203ENST00000440571 PRYO14603 147 aa13.57□□□□□ -0.24
CNOT3-203ENST00000440571 DDTP30046 118 aa13.57□□□□□ -0.24
CNOT3-203ENST00000440571 KRTAP10-8P60410 259 aa13.57□□□□□ -0.24
CNOT3-203ENST00000440571 S100A7L2Q5SY68 101 aa13.56□□□□□ -0.24
CNOT3-203ENST00000440571 PRLHP81277 87 aa13.55□□□□□ -0.24
CNOT3-203ENST00000440571 SPANXDQ9BXN6 97 aa13.55□□□□□ -0.24
CNOT3-203ENST00000440571 SPANXCQ9NY87 97 aa13.55□□□□□ -0.24
CNOT3-203ENST00000440571 KRTAP1-4P0C5Y4 121 aa13.53□□□□□ -0.24
CNOT3-203ENST00000440571 COPS9Q8WXC6 57 aa13.52□□□□□ -0.25
CNOT3-203ENST00000440571 SPRR1AP35321 89 aa13.51□□□□□ -0.25
CNOT3-203ENST00000440571 Q6ZVH6 145 aa13.51□□□□□ -0.25
CNOT3-203ENST00000440571 LINC00337Q8N6G1 96 aa13.51□□□□□ -0.25
CNOT3-203ENST00000440571 PRR26Q8N8Z3 221 aa13.51□□□□□ -0.25
CNOT3-203ENST00000440571 ETDCA0A1B0GVM5 59 aa13.5□□□□□ -0.25
CNOT3-203ENST00000440571 IGLV6-57P01721 117 aa13.5□□□□□ -0.25
CNOT3-203ENST00000440571 IFITM1P13164 125 aa13.5□□□□□ -0.25
CNOT3-203ENST00000440571 TMA7Q9Y2S6 64 aaKnown RBP13.49□□□□□ -0.25
CNOT3-203ENST00000440571 LINC00518Q8N0U6 118 aa13.48□□□□□ -0.25
CNOT3-203ENST00000440571 OR13C6PQ8NH95 151 aa13.48□□□□□ -0.25
CNOT3-203ENST00000440571 MUSTN1Q8IVN3 82 aa13.47□□□□□ -0.25
CNOT3-203ENST00000440571 HIGD2AQ9BW72 106 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms