RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 SND1-IT1Q9HBX3 110 aa10.54□□□□□ -0.72
TARDBP-203ENST00000439080 SMIM13P0DJ93 91 aa10.53□□□□□ -0.72
TARDBP-203ENST00000439080 AKR1D1P51857 326 aa10.52□□□□□ -0.72
TARDBP-203ENST00000439080 PRR3P79522 188 aaKnown RBP10.52□□□□□ -0.72
TARDBP-203ENST00000439080 PLA2G2DQ9UNK4 145 aa10.52□□□□□ -0.73
TARDBP-203ENST00000439080 IGKV2D-26A0A0A0MRZ7 120 aa10.51□□□□□ -0.73
TARDBP-203ENST00000439080 INAFM2P0DMQ5 153 aa10.51□□□□□ -0.73
TARDBP-203ENST00000439080 LINC00587B1AMM8 73 aa10.5□□□□□ -0.73
TARDBP-203ENST00000439080 C22orf24Q9Y442 160 aa10.5□□□□□ -0.73
TARDBP-203ENST00000439080 MYCBP2O75592 4640 aa10.49□□□□□ -0.73
TARDBP-203ENST00000439080 UBE2BP63146 152 aa10.49□□□□□ -0.73
TARDBP-203ENST00000439080 ANKRD39Q53RE8 183 aa10.49□□□□□ -0.73
TARDBP-203ENST00000439080 MIR7-3HGQ8N6C7 128 aa10.49□□□□□ -0.73
TARDBP-203ENST00000439080 HNRNPA3P51991 378 aaKnown RBP10.48□□□□□ -0.73
TARDBP-203ENST00000439080 MRPL55Q7Z7F7 128 aaKnown RBP10.48□□□□□ -0.73
TARDBP-203ENST00000439080 KRTAP11-1Q8IUC1 163 aa10.48□□□□□ -0.73
TARDBP-203ENST00000439080 TP73-AS1Q9UF72 201 aa10.48□□□□□ -0.73
TARDBP-203ENST00000439080 PSORS1C2Q9UIG4 136 aa10.48□□□□□ -0.73
TARDBP-203ENST00000439080 TMA7Q9Y2S6 64 aaKnown RBP10.48□□□□□ -0.73
TARDBP-203ENST00000439080 IGLV5-37A0A075B6J1 123 aa10.47□□□□□ -0.73
TARDBP-203ENST00000439080 A0A0J9YXY3 114 aa10.47□□□□□ -0.73
TARDBP-203ENST00000439080 NKAPP1Q8N9T2 125 aa10.47□□□□□ -0.73
TARDBP-203ENST00000439080 TTTY13Q9BZ97 58 aa10.47□□□□□ -0.73
TARDBP-203ENST00000439080 ZNF815PA8K554 130 aa10.46□□□□□ -0.74
TARDBP-203ENST00000439080 VPREB1P12018 145 aa10.46□□□□□ -0.74
TARDBP-203ENST00000439080 LBHQ53QV2 105 aaPredicted RBP10.46□□□□□ -0.74
TARDBP-203ENST00000439080 DAND5Q8N907 189 aa10.46□□□□□ -0.74
TARDBP-203ENST00000439080 Q8NDZ9 215 aa10.46□□□□□ -0.74
TARDBP-203ENST00000439080 SCGB1D1O95968 90 aa10.44□□□□□ -0.74
TARDBP-203ENST00000439080 RPL24P83731 157 aaKnown RBP10.44□□□□□ -0.74
TARDBP-203ENST00000439080 C1orf137Q5JT78 98 aa10.44□□□□□ -0.74
TARDBP-203ENST00000439080 GAGE10A6NGK3 116 aa10.43□□□□□ -0.74
TARDBP-203ENST00000439080 FLG2Q5D862 2391 aaPredicted RBP10.43□□□□□ -0.74
TARDBP-203ENST00000439080 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
TARDBP-203ENST00000439080 LINC00167Q96N53 147 aa10.42□□□□□ -0.74
TARDBP-203ENST00000439080 HSBP1L1C9JCN9 74 aa10.41□□□□□ -0.74
TARDBP-203ENST00000439080 RPL37AP8A6NKH3 93 aa10.4□□□□□ -0.74
TARDBP-203ENST00000439080 ADAMTSL4-AS1Q5T5F5 129 aa10.4□□□□□ -0.74
TARDBP-203ENST00000439080 PCP2Q8IVA1 136 aa10.4□□□□□ -0.74
TARDBP-203ENST00000439080 FAT3Q8TDW7 4589 aa10.4□□□□□ -0.74
TARDBP-203ENST00000439080 MIEN1Q9BRT3 115 aa10.4□□□□□ -0.74
TARDBP-203ENST00000439080 TIMM17BO60830 172 aa10.39□□□□□ -0.75
TARDBP-203ENST00000439080 LITAFQ99732 161 aa10.39□□□□□ -0.75
TARDBP-203ENST00000439080 LRP1Q07954 4544 aaKnown RBP10.39□□□□□ -0.75
TARDBP-203ENST00000439080 IGKV2-28A0A075B6P5 120 aa10.39□□□□□ -0.75
TARDBP-203ENST00000439080 IGKV2D-28P01615 120 aa10.39□□□□□ -0.75
TARDBP-203ENST00000439080 NPC2P61916 151 aa10.39□□□□□ -0.75
TARDBP-203ENST00000439080 SCGB1D4Q6XE38 83 aa10.39□□□□□ -0.75
TARDBP-203ENST00000439080 LOC107984156A0A0G2JMH3 177 aa10.38□□□□□ -0.75
TARDBP-203ENST00000439080 NCR3O14931 201 aa10.38□□□□□ -0.75
TARDBP-203ENST00000439080 ARL17AQ8IVW1 177 aa10.38□□□□□ -0.75
TARDBP-203ENST00000439080 IGLV7-43P04211 117 aa10.37□□□□□ -0.75
TARDBP-203ENST00000439080 SOSTDC1Q6X4U4 206 aa10.37□□□□□ -0.75
TARDBP-203ENST00000439080 IGLV1-50A0A075B6I6 118 aa10.35□□□□□ -0.75
TARDBP-203ENST00000439080 TMEM238C9JI98 176 aa10.35□□□□□ -0.75
TARDBP-203ENST00000439080 M0R378 163 aa10.35□□□□□ -0.75
TARDBP-203ENST00000439080 EIF4EBP3O60516 100 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-203ENST00000439080 SPINK6Q6UWN8 80 aa10.35□□□□□ -0.75
TARDBP-203ENST00000439080 SRSF9Q13242 221 aaKnown RBP eCLIP10.34□□□□□ -0.75
TARDBP-203ENST00000439080 JOSD1Q15040 202 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-203ENST00000439080 BCE1O60756 84 aa10.33□□□□□ -0.76
TARDBP-203ENST00000439080 LINC00308Q8TCZ7 52 aa10.33□□□□□ -0.76
TARDBP-203ENST00000439080 NDUFC2O95298 119 aa10.32□□□□□ -0.76
TARDBP-203ENST00000439080 SPANXDQ9BXN6 97 aa10.32□□□□□ -0.76
TARDBP-203ENST00000439080 SPANXB1Q9NS25 103 aaPredicted RBP10.32□□□□□ -0.76
TARDBP-203ENST00000439080 SPANXCQ9NY87 97 aa10.32□□□□□ -0.76
TARDBP-203ENST00000439080 TRBV10-2A0A0K0K1G8 114 aa10.3□□□□□ -0.76
TARDBP-203ENST00000439080 REG3GQ6UW15 175 aa10.3□□□□□ -0.76
TARDBP-203ENST00000439080 TMEM126AQ9H061 195 aa10.3□□□□□ -0.76
TARDBP-203ENST00000439080 VAMP8Q9BV40 100 aa10.29□□□□□ -0.76
TARDBP-203ENST00000439080 PAM16Q9Y3D7 125 aa10.29□□□□□ -0.76
TARDBP-203ENST00000439080 TRBV10-3A0A0K0K1G6 114 aa10.28□□□□□ -0.76
TARDBP-203ENST00000439080 KRTAP29-1A8MX34 341 aaPredicted RBP10.27□□□□□ -0.76
TARDBP-203ENST00000439080 PRYO14603 147 aa10.27□□□□□ -0.76
TARDBP-203ENST00000439080 ZNF861PO60384 105 aa10.27□□□□□ -0.76
TARDBP-203ENST00000439080 COX8AP10176 69 aa10.27□□□□□ -0.76
TARDBP-203ENST00000439080 SPATA45Q537H7 98 aa10.27□□□□□ -0.76
TARDBP-203ENST00000439080 PYY3Q5JQD4 70 aa10.27□□□□□ -0.76
TARDBP-203ENST00000439080 DIRC1Q969H9 104 aa10.27□□□□□ -0.76
TARDBP-203ENST00000439080 H0Y9J4 135 aa10.26□□□□□ -0.77
TARDBP-203ENST00000439080 DDTP30046 118 aa10.26□□□□□ -0.77
TARDBP-203ENST00000439080 Q6ZVH6 145 aa10.26□□□□□ -0.77
TARDBP-203ENST00000439080 OXTP01178 125 aa10.26□□□□□ -0.77
TARDBP-203ENST00000439080 RPL28P46779 137 aaKnown RBP10.26□□□□□ -0.77
TARDBP-203ENST00000439080 UBE2AP49459 152 aa10.26□□□□□ -0.77
TARDBP-203ENST00000439080 COPS9Q8WXC6 57 aa10.26□□□□□ -0.77
TARDBP-203ENST00000439080 DMBT1Q9UGM3 2413 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-203ENST00000439080 IFITM1P13164 125 aa10.25□□□□□ -0.77
TARDBP-203ENST00000439080 PRLHP81277 87 aa10.25□□□□□ -0.77
TARDBP-203ENST00000439080 S100A7L2Q5SY68 101 aa10.25□□□□□ -0.77
TARDBP-203ENST00000439080 FAM19A1Q7Z5A9 133 aa10.25□□□□□ -0.77
TARDBP-203ENST00000439080 KRTAP13-1Q8IUC0 172 aa10.25□□□□□ -0.77
TARDBP-203ENST00000439080 KCNQ1DNQ9H478 68 aa10.25□□□□□ -0.77
TARDBP-203ENST00000439080 IGLV6-57P01721 117 aa10.24□□□□□ -0.77
TARDBP-203ENST00000439080 S100A12P80511 92 aa10.24□□□□□ -0.77
TARDBP-203ENST00000439080 PPDPFQ9H3Y8 114 aa10.24□□□□□ -0.77
TARDBP-203ENST00000439080 J3QL48 77 aa10.23□□□□□ -0.77
TARDBP-203ENST00000439080 C14orf144Q96I85 54 aa10.23□□□□□ -0.77
TARDBP-203ENST00000439080 TNXBP22105 4242 aa10.22□□□□□ -0.77
TARDBP-203ENST00000439080 DLEU1O43261 78 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms