RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 H0Y8G0 127 aa6.78□□□□□ -1.32
CSTF3-203ENST00000438862 MALP21145 153 aa6.78□□□□□ -1.32
CSTF3-203ENST00000438862 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
CSTF3-203ENST00000438862 JOSD1Q15040 202 aaPredicted RBP6.77□□□□□ -1.33
CSTF3-203ENST00000438862 TMEM170BQ5T4T1 132 aa6.77□□□□□ -1.33
CSTF3-203ENST00000438862 C5orf38Q86SI9 138 aa6.77□□□□□ -1.33
CSTF3-203ENST00000438862 IGLV1-50A0A075B6I6 118 aa6.76□□□□□ -1.33
CSTF3-203ENST00000438862 GVQW2A0A096LPI5 108 aaPredicted RBP6.76□□□□□ -1.33
CSTF3-203ENST00000438862 IGLV5-39A0A0G2JS06 123 aa6.76□□□□□ -1.33
CSTF3-203ENST00000438862 TMEM223A0PJW6 202 aa6.76□□□□□ -1.33
CSTF3-203ENST00000438862 HERVK_113P61574 105 aa6.76□□□□□ -1.33
CSTF3-203ENST00000438862 C15orf56Q8N910 161 aa6.76□□□□□ -1.33
CSTF3-203ENST00000438862 SMIM1B2RUZ4 78 aa6.75□□□□□ -1.33
CSTF3-203ENST00000438862 SFTA2Q6UW10 78 aa6.75□□□□□ -1.33
CSTF3-203ENST00000438862 Q8IZM0 81 aa6.75□□□□□ -1.33
CSTF3-203ENST00000438862 C2orf48Q96LS8 159 aa6.75□□□□□ -1.33
CSTF3-203ENST00000438862 SCGB1D1O95968 90 aa6.74□□□□□ -1.33
CSTF3-203ENST00000438862 CXCL5P42830 114 aa6.74□□□□□ -1.33
CSTF3-203ENST00000438862 DIRC1Q969H9 104 aa6.74□□□□□ -1.33
CSTF3-203ENST00000438862 PMCHL2Q9BQD1 86 aa6.74□□□□□ -1.33
CSTF3-203ENST00000438862 E9PLD3 99 aa6.73□□□□□ -1.33
CSTF3-203ENST00000438862 ZNF561-AS1K7EIQ3 104 aa6.73□□□□□ -1.33
CSTF3-203ENST00000438862 PRSS2P07478 247 aa6.73□□□□□ -1.33
CSTF3-203ENST00000438862 KIAA0087Q14695 138 aa6.73□□□□□ -1.33
CSTF3-203ENST00000438862 HIGD2BQ4VC39 106 aa6.73□□□□□ -1.33
CSTF3-203ENST00000438862 ORAOV1Q8WV07 137 aa6.73□□□□□ -1.33
CSTF3-203ENST00000438862 PLEKHB2Q96CS7 222 aa6.73□□□□□ -1.33
CSTF3-203ENST00000438862 HSBP1L1C9JCN9 74 aa6.72□□□□□ -1.33
CSTF3-203ENST00000438862 SPINK8P0C7L1 97 aa6.72□□□□□ -1.33
CSTF3-203ENST00000438862 C6orf226Q5I0X4 101 aa6.72□□□□□ -1.33
CSTF3-203ENST00000438862 LEPROTO15243 131 aa6.71□□□□□ -1.34
CSTF3-203ENST00000438862 SPAG11BQ08648 103 aa6.71□□□□□ -1.34
CSTF3-203ENST00000438862 RNF151Q2KHN1 245 aa6.71□□□□□ -1.34
CSTF3-203ENST00000438862 PYY3Q5JQD4 70 aa6.71□□□□□ -1.34
CSTF3-203ENST00000438862 C1orf137Q5JT78 98 aa6.71□□□□□ -1.34
CSTF3-203ENST00000438862 COX7B2Q8TF08 81 aa6.71□□□□□ -1.34
CSTF3-203ENST00000438862 LOC105371267A0A1B0GV96 52 aa6.7□□□□□ -1.34
CSTF3-203ENST00000438862 RPL13AP40429 203 aaKnown RBP6.7□□□□□ -1.34
CSTF3-203ENST00000438862 NMUP48645 174 aa6.7□□□□□ -1.34
CSTF3-203ENST00000438862 CKS1BP61024 79 aa6.7□□□□□ -1.34
CSTF3-203ENST00000438862 TRBV30A0A0K0K1B3 111 aa6.69□□□□□ -1.34
CSTF3-203ENST00000438862 LINC00587B1AMM8 73 aa6.69□□□□□ -1.34
CSTF3-203ENST00000438862 J3QQQ9 107 aa6.69□□□□□ -1.34
CSTF3-203ENST00000438862 NDUFA1O15239 70 aa6.69□□□□□ -1.34
CSTF3-203ENST00000438862 HERV-K104P63124 156 aa6.69□□□□□ -1.34
CSTF3-203ENST00000438862 SYCNQ0VAF6 134 aa6.69□□□□□ -1.34
CSTF3-203ENST00000438862 TOMM7Q9P0U1 55 aa6.69□□□□□ -1.34
CSTF3-203ENST00000438862 H0Y9J4 135 aa6.68□□□□□ -1.34
CSTF3-203ENST00000438862 IGLV7-43P04211 117 aa6.68□□□□□ -1.34
CSTF3-203ENST00000438862 ATOH7Q8N100 152 aa6.68□□□□□ -1.34
CSTF3-203ENST00000438862 CAMK2N2Q96S95 79 aa6.68□□□□□ -1.34
CSTF3-203ENST00000438862 CDIP1Q9H305 208 aa6.68□□□□□ -1.34
CSTF3-203ENST00000438862 MYMXA0A1B0GTQ4 84 aa6.67□□□□□ -1.34
CSTF3-203ENST00000438862 SMIM6P0DI80 62 aa6.67□□□□□ -1.34
CSTF3-203ENST00000438862 LGALS3P17931 250 aaKnown RBP6.67□□□□□ -1.34
CSTF3-203ENST00000438862 PTTG1IPP53801 180 aa6.67□□□□□ -1.34
CSTF3-203ENST00000438862 ZNF625Q96I27 306 aaPredicted RBP6.67□□□□□ -1.34
CSTF3-203ENST00000438862 CARD19Q96LW7 228 aa6.67□□□□□ -1.34
CSTF3-203ENST00000438862 S100A12P80511 92 aa6.66□□□□□ -1.34
CSTF3-203ENST00000438862 COX17Q14061 63 aa6.66□□□□□ -1.34
CSTF3-203ENST00000438862 VAMP8Q9BV40 100 aa6.66□□□□□ -1.34
CSTF3-203ENST00000438862 NDUFA12Q9UI09 145 aa6.66□□□□□ -1.34
CSTF3-203ENST00000438862 IGKV2D-26A0A0A0MRZ7 120 aa6.65□□□□□ -1.34
CSTF3-203ENST00000438862 A0A1W2PNN7 141 aa6.65□□□□□ -1.34
CSTF3-203ENST00000438862 KRTAP1-4P0C5Y4 121 aa6.65□□□□□ -1.34
CSTF3-203ENST00000438862 TLX1NBP0CAT3 122 aa6.65□□□□□ -1.34
CSTF3-203ENST00000438862 UNQ6190/PRO20217Q6UXQ8 127 aa6.65□□□□□ -1.34
CSTF3-203ENST00000438862 LOC107984640A0A0U1RRK4 108 aa6.64□□□□□ -1.35
CSTF3-203ENST00000438862 DLEU1O43261 78 aa6.64□□□□□ -1.35
CSTF3-203ENST00000438862 LINC01547P58512 204 aaPredicted RBP6.64□□□□□ -1.35
CSTF3-203ENST00000438862 TSPEAR-AS2P59090 65 aa6.64□□□□□ -1.35
CSTF3-203ENST00000438862 GAGE2BQ13066 116 aa6.64□□□□□ -1.35
CSTF3-203ENST00000438862 C2orf82Q6UX34 121 aa6.64□□□□□ -1.35
CSTF3-203ENST00000438862 LINC00526Q96FQ7 95 aa6.64□□□□□ -1.35
CSTF3-203ENST00000438862 C6orf48Q9UBA6 75 aa6.64□□□□□ -1.35
CSTF3-203ENST00000438862 MUC17Q685J3 4493 aa6.64□□□□□ -1.35
CSTF3-203ENST00000438862 TSPAN13O95857 204 aa6.63□□□□□ -1.35
CSTF3-203ENST00000438862 C10orf25Q5T742 122 aa6.63□□□□□ -1.35
CSTF3-203ENST00000438862 ZNF815PA8K554 130 aa6.62□□□□□ -1.35
CSTF3-203ENST00000438862 NDUFC2-KCTD14E9PQ53 114 aa6.62□□□□□ -1.35
CSTF3-203ENST00000438862 TIMM17BO60830 172 aa6.62□□□□□ -1.35
CSTF3-203ENST00000438862 COX8AP10176 69 aa6.62□□□□□ -1.35
CSTF3-203ENST00000438862 SPATA45Q537H7 98 aa6.62□□□□□ -1.35
CSTF3-203ENST00000438862 C9orf116Q5BN46 136 aaPredicted RBP6.62□□□□□ -1.35
CSTF3-203ENST00000438862 PHF5AQ7RTV0 110 aaKnown RBP6.62□□□□□ -1.35
CSTF3-203ENST00000438862 BOD1L2Q8IYS8 172 aa6.62□□□□□ -1.35
CSTF3-203ENST00000438862 ERG28Q9UKR5 140 aa6.62□□□□□ -1.35
CSTF3-203ENST00000438862 PAM16Q9Y3D7 125 aa6.62□□□□□ -1.35
CSTF3-203ENST00000438862 A0A0J9YXY3 114 aa6.6□□□□□ -1.35
CSTF3-203ENST00000438862 Q6ZVH6 145 aa6.6□□□□□ -1.35
CSTF3-203ENST00000438862 PCP2Q8IVA1 136 aa6.6□□□□□ -1.35
CSTF3-203ENST00000438862 MEIG1Q5JSS6 88 aa6.59□□□□□ -1.35
CSTF3-203ENST00000438862 SLC25A34Q6PIV7 304 aa6.59□□□□□ -1.35
CSTF3-203ENST00000438862 PPDPFQ9H3Y8 114 aa6.59□□□□□ -1.35
CSTF3-203ENST00000438862 LOC107984156A0A0G2JMH3 177 aa6.58□□□□□ -1.36
CSTF3-203ENST00000438862 TPRXLQ17RH7 258 aa6.58□□□□□ -1.36
CSTF3-203ENST00000438862 SCGB1D4Q6XE38 83 aa6.58□□□□□ -1.36
CSTF3-203ENST00000438862 ARL17AQ8IVW1 177 aa6.58□□□□□ -1.36
CSTF3-203ENST00000438862 TMEM238C9JI98 176 aa6.57□□□□□ -1.36
CSTF3-203ENST00000438862 LINC00158P58513 81 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms