RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TIMM8BQ9Y5J9 83 aaPredicted RBP1.59□□□□□ -2.15
LSM1P1-201ENST00000438629 CUL9Q8IWT3 2517 aa1.59□□□□□ -2.16
LSM1P1-201ENST00000438629 IGKV2-40A0A087WW87 121 aaPredicted RBP1.58□□□□□ -2.16
LSM1P1-201ENST00000438629 LINC01546A6NGU7 62 aa1.58□□□□□ -2.16
LSM1P1-201ENST00000438629 IGIPA6NJ69 53 aa1.58□□□□□ -2.16
LSM1P1-201ENST00000438629 IGKV2D-40P01614 121 aaPredicted RBP1.58□□□□□ -2.16
LSM1P1-201ENST00000438629 RNASE3P12724 160 aaKnown RBP1.58□□□□□ -2.16
LSM1P1-201ENST00000438629 FXYD6P3P58550 94 aa1.58□□□□□ -2.16
LSM1P1-201ENST00000438629 FXYD3Q14802 87 aa1.58□□□□□ -2.16
LSM1P1-201ENST00000438629 DEFB132Q7Z7B7 95 aa1.58□□□□□ -2.16
LSM1P1-201ENST00000438629 COA5Q86WW8 74 aa1.58□□□□□ -2.16
LSM1P1-201ENST00000438629 SPACA4Q8TDM5 124 aa1.58□□□□□ -2.16
LSM1P1-201ENST00000438629 INTS1Q8N201 2190 aaKnown RBP1.58□□□□□ -2.16
LSM1P1-201ENST00000438629 DNAJC13O75165 2243 aa1.58□□□□□ -2.16
LSM1P1-201ENST00000438629 ARFGEF3Q5TH69 2177 aa1.57□□□□□ -2.16
LSM1P1-201ENST00000438629 I3L3M4 83 aa1.57□□□□□ -2.16
LSM1P1-201ENST00000438629 ARL14EPLP0DKL9 152 aa1.57□□□□□ -2.16
LSM1P1-201ENST00000438629 IL9P15248 144 aa1.57□□□□□ -2.16
LSM1P1-201ENST00000438629 DEFB112Q30KQ8 113 aa1.57□□□□□ -2.16
LSM1P1-201ENST00000438629 ZNF625Q96I27 306 aaPredicted RBP1.57□□□□□ -2.16
LSM1P1-201ENST00000438629 GAFA1Q96PS6 74 aa1.57□□□□□ -2.16
LSM1P1-201ENST00000438629 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.56□□□□□ -2.16
LSM1P1-201ENST00000438629 IGKV2-29A2NJV5 120 aaPredicted RBP1.56□□□□□ -2.16
LSM1P1-201ENST00000438629 J3QKU1 62 aa1.56□□□□□ -2.16
LSM1P1-201ENST00000438629 NDUFA4O00483 81 aa1.56□□□□□ -2.16
LSM1P1-201ENST00000438629 COX17Q14061 63 aa1.56□□□□□ -2.16
LSM1P1-201ENST00000438629 C5orf56Q8N8D9 126 aa1.56□□□□□ -2.16
LSM1P1-201ENST00000438629 LINC00472Q9H8W2 130 aa1.56□□□□□ -2.16
LSM1P1-201ENST00000438629 COL4A2P08572 1712 aa1.55□□□□□ -2.16
LSM1P1-201ENST00000438629 TRGV2A0A075B6R0 118 aa1.55□□□□□ -2.16
LSM1P1-201ENST00000438629 DEFB114Q30KQ6 69 aa1.55□□□□□ -2.16
LSM1P1-201ENST00000438629 Q96NJ1 140 aa1.55□□□□□ -2.16
LSM1P1-201ENST00000438629 TRGV1A0A0A0MS02 117 aa1.54□□□□□ -2.16
LSM1P1-201ENST00000438629 LINC00959A0A1B0GUT2 108 aa1.54□□□□□ -2.16
LSM1P1-201ENST00000438629 TNRC6CQ9HCJ0 1690 aaKnown RBP1.54□□□□□ -2.16
LSM1P1-201ENST00000438629 NDUFA3O95167 84 aa1.53□□□□□ -2.16
LSM1P1-201ENST00000438629 PRRC2BQ5JSZ5 2229 aaKnown RBP1.53□□□□□ -2.16
LSM1P1-201ENST00000438629 BAHCC1Q9P281 2608 aa1.53□□□□□ -2.16
LSM1P1-201ENST00000438629 ABCA4P78363 2273 aa1.52□□□□□ -2.17
LSM1P1-201ENST00000438629 UNC13CQ8NB66 2214 aa1.52□□□□□ -2.17
LSM1P1-201ENST00000438629 DOCK10Q96BY6 2186 aa1.52□□□□□ -2.17
LSM1P1-201ENST00000438629 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
LSM1P1-201ENST00000438629 A0A1B0GU69 56 aa1.52□□□□□ -2.17
LSM1P1-201ENST00000438629 INE1O15225 51 aa1.52□□□□□ -2.17
LSM1P1-201ENST00000438629 PIN1P1O15428 100 aa1.52□□□□□ -2.17
LSM1P1-201ENST00000438629 ACYP2P14621 99 aa1.52□□□□□ -2.17
LSM1P1-201ENST00000438629 COX7BP24311 80 aa1.52□□□□□ -2.17
LSM1P1-201ENST00000438629 KCNQ1DNQ9H478 68 aa1.52□□□□□ -2.17
LSM1P1-201ENST00000438629 TMEM167BQ9NRX6 74 aa1.52□□□□□ -2.17
LSM1P1-201ENST00000438629 RP1P56715 2156 aa1.52□□□□□ -2.17
LSM1P1-201ENST00000438629 KMT2BQ9UMN6 2715 aaPredicted RBP1.52□□□□□ -2.17
LSM1P1-201ENST00000438629 LOC110117498A0A087WWA1 95 aa1.51□□□□□ -2.17
LSM1P1-201ENST00000438629 ETDCA0A1B0GVM5 59 aa1.51□□□□□ -2.17
LSM1P1-201ENST00000438629 M0R2N4 97 aa1.51□□□□□ -2.17
LSM1P1-201ENST00000438629 HAMPP81172 84 aa1.51□□□□□ -2.17
LSM1P1-201ENST00000438629 SPAG17Q6Q759 2223 aa1.51□□□□□ -2.17
LSM1P1-201ENST00000438629 SDK1Q7Z5N4 2213 aa1.51□□□□□ -2.17
LSM1P1-201ENST00000438629 ZFHX2Q9C0A1 2572 aaPredicted RBP1.51□□□□□ -2.17
LSM1P1-201ENST00000438629 TRIOBPQ9H2D6 2365 aa1.5□□□□□ -2.17
LSM1P1-201ENST00000438629 NCR3O14931 201 aa1.5□□□□□ -2.17
LSM1P1-201ENST00000438629 FXYD4P59646 89 aa1.5□□□□□ -2.17
LSM1P1-201ENST00000438629 H0YGX0 51 aa1.49□□□□□ -2.17
LSM1P1-201ENST00000438629 CACNA1GO43497 2377 aa1.48□□□□□ -2.17
LSM1P1-201ENST00000438629 BRWD1Q9NSI6 2320 aa1.48□□□□□ -2.17
LSM1P1-201ENST00000438629 PRB1P04280 392 aa1.47□□□□□ -2.17
LSM1P1-201ENST00000438629 DEFB103AP81534 67 aa1.47□□□□□ -2.17
LSM1P1-201ENST00000438629 Q6ZRN7 208 aaPredicted RBP1.47□□□□□ -2.17
LSM1P1-201ENST00000438629 CCL19Q99731 98 aa1.47□□□□□ -2.17
LSM1P1-201ENST00000438629 CPSF4LA6NMK7 179 aaKnown RBP1.46□□□□□ -2.18
LSM1P1-201ENST00000438629 G3V318 75 aa1.46□□□□□ -2.18
LSM1P1-201ENST00000438629 TFF3Q07654 80 aa1.46□□□□□ -2.18
LSM1P1-201ENST00000438629 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.46□□□□□ -2.18
LSM1P1-201ENST00000438629 Q6ZQY7 126 aa1.46□□□□□ -2.18
LSM1P1-201ENST00000438629 ALPK2Q86TB3 2170 aa1.45□□□□□ -2.18
LSM1P1-201ENST00000438629 RPL38P63173 70 aaKnown RBP1.45□□□□□ -2.18
LSM1P1-201ENST00000438629 UNQ6190/PRO20217Q6UXQ8 127 aa1.45□□□□□ -2.18
LSM1P1-201ENST00000438629 SSBP3-AS1Q7Z2R9 100 aa1.45□□□□□ -2.18
LSM1P1-201ENST00000438629 SSC5DA1L4H1 1573 aa1.45□□□□□ -2.18
LSM1P1-201ENST00000438629 FREM1Q5H8C1 2179 aa1.44□□□□□ -2.18
LSM1P1-201ENST00000438629 DEFB131BA0A096LNP1 70 aa1.44□□□□□ -2.18
LSM1P1-201ENST00000438629 MRPL33O75394 65 aaKnown RBP1.44□□□□□ -2.18
LSM1P1-201ENST00000438629 LY6G6CO95867 125 aa1.44□□□□□ -2.18
LSM1P1-201ENST00000438629 IAPPP10997 89 aa1.44□□□□□ -2.18
LSM1P1-201ENST00000438629 TNCP24821 2201 aa1.44□□□□□ -2.18
LSM1P1-201ENST00000438629 CACNA1CQ13936 2221 aa1.43□□□□□ -2.18
LSM1P1-201ENST00000438629 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
LSM1P1-201ENST00000438629 GVQW2A0A096LPI5 108 aaPredicted RBP1.43□□□□□ -2.18
LSM1P1-201ENST00000438629 KRTAP12-1P59990 96 aa1.43□□□□□ -2.18
LSM1P1-201ENST00000438629 Q6ZRX8 168 aa1.43□□□□□ -2.18
LSM1P1-201ENST00000438629 SMIM11BQ8TCY0 68 aa1.43□□□□□ -2.18
LSM1P1-201ENST00000438629 SMIM2Q9BVW6 85 aa1.43□□□□□ -2.18
LSM1P1-201ENST00000438629 F5P12259 2224 aa1.42□□□□□ -2.18
LSM1P1-201ENST00000438629 A0A096LNT2 108 aa1.42□□□□□ -2.18
LSM1P1-201ENST00000438629 SPTY2D1-AS1A0A0U1RR47 76 aa1.42□□□□□ -2.18
LSM1P1-201ENST00000438629 CRIP1P50238 77 aa1.42□□□□□ -2.18
LSM1P1-201ENST00000438629 LINC00158P58513 81 aa1.42□□□□□ -2.18
LSM1P1-201ENST00000438629 KRTAP13-4Q3LI77 160 aa1.42□□□□□ -2.18
LSM1P1-201ENST00000438629 PCOTHQ58A44 107 aa1.42□□□□□ -2.18
LSM1P1-201ENST00000438629 RPS27LQ71UM5 84 aaKnown RBP1.42□□□□□ -2.18
LSM1P1-201ENST00000438629 LINC00308Q8TCZ7 52 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms