RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 LOC101927531A0A1B0GV80 90 aa0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 LOC285095A0A1B0GVY8 99 aa0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 J3QR89 54 aa0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 RBP4P02753 201 aa0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 POLR2JP52435 117 aaKnown RBP0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 NCS1P62166 190 aa0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 SELENOWP63302 87 aa0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 XAF1Q6GPH4 301 aa0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 CTAGE3PQ8IX95 158 aa0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 C1orf54Q8WWF1 131 aa0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 DMAC1Q96GE9 116 aa0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 SNRNP25Q9BV90 132 aaKnown RBP0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 ATG5Q9H1Y0 275 aa0.75□□□□□ -2.29
TRAPPC13-204ENST00000438419 HIGD1CA8MV81 97 aa0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 M0R2P5 195 aa0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 NPFFO15130 113 aa0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 YPEL1O60688 119 aa0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 CAV3P56539 151 aa0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 NCBP2-AS2Q69YL0 99 aa0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 ATP11AUNQ6ZP68 121 aa0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 SLC25A26Q70HW3 274 aa0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 SNX29P2Q8IUI4 249 aa0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 SDF2Q99470 211 aa0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 VPS25Q9BRG1 176 aa0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 LSM2Q9Y333 95 aaKnown RBP0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 DNAH8Q96JB1 4490 aa0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 MUC17Q685J3 4493 aa0.74□□□□□ -2.29
TRAPPC13-204ENST00000438419 NBDYA0A0U1RRE5 68 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 ZNF670-ZNF695F2Z2N8 137 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 SPINT3P49223 89 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 COPZ1P61923 177 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 FXYD3Q14802 87 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 SPCS2Q15005 226 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 RPL13AP3Q6NVV1 102 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 ATP6V0E2Q8NHE4 81 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 LINC00208Q96KT6 92 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 PPP3R2Q96LZ3 170 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 LINC00470Q9BZP3 86 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 SAR1AQ9NR31 198 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 TAS2R8Q9NYW2 309 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 APLNQ9ULZ1 77 aa0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 NOP16Q9Y3C1 178 aaKnown RBP0.73□□□□□ -2.29
TRAPPC13-204ENST00000438419 TRAV2A0A0B4J234 112 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 H3BSH0 61 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 K7ERU9 68 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 PITX3O75364 302 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 IFI6P09912 130 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 GNGT1P63211 74 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 EMX2Q04743 252 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 SCIMPQ6UWF3 145 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 ATOH7Q8N100 152 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 C4orf33Q8N1A6 199 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 C5orf56Q8N8D9 126 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 PLAC4Q8WY50 150 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 COX14Q96I36 57 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 TMEM191AQ9H0A3 160 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 DYNLRB1Q9NP97 96 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 A0A0G2JND7 137 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 ATP6V1G2-DDX39BF2Z307 99 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 TFF1P04155 84 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 CCKP06307 115 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 PIRTP0C851 137 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 S100A3P33764 101 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 RRAS2P62070 204 aaPredicted RBP0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 SPINK9Q5DT21 86 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 PPDPFLQ8WWR9 84 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 LCN9Q8WX39 176 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 TSLPQ969D9 159 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 ARL11Q969Q4 196 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 DPY30Q9C005 99 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 LINC00846Q9NV44 126 aa0.72□□□□□ -2.29
TRAPPC13-204ENST00000438419 MUC5ACP98088 5654 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 TRBV10-1A0A0K0K1A3 114 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 CCL22O00626 93 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 LINC00032P0C843 101 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 PYYP10082 97 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 SMIM11AP58511 58 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 RPL38P63173 70 aaKnown RBP0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 ZNF56Q15929 161 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 SLC48A1Q6P1K1 146 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 UBE2DNLQ8IWF7 75 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 DYNLRB2Q8TF09 96 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 C10orf82Q8WW14 230 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 DPH3Q96FX2 82 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 CGREF1Q99674 301 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 C2orf88Q9BSF0 95 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 Q9H521 79 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 CCDC167Q9P0B6 97 aa0.71□□□□□ -2.3
TRAPPC13-204ENST00000438419 A0A1B0GV90 55 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 H0YGG7 62 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 H3BUX3 64 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 J3QLW9 94 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 M0R129 80 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 FXYD1O00168 92 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 GNGT2O14610 69 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 DLEU1O43261 78 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 GNG7O60262 68 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 GUCA1AP43080 201 aaPredicted RBP0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 LINC01545Q5VT33 79 aa0.7□□□□□ -2.3
TRAPPC13-204ENST00000438419 C10orf99Q6UWK7 81 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms