RNA–Protein interactions for RNA: ENST00000438146.6

RBFOX2-209, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-209ENST00000438146 HIST3H2BBQ8N257 126 aa14.68□□□□□ -0.06
RBFOX2-209ENST00000438146 PLA2G2DQ9UNK4 145 aa14.68□□□□□ -0.06
RBFOX2-209ENST00000438146 PKHD1L1Q86WI1 4243 aa14.68□□□□□ -0.06
RBFOX2-209ENST00000438146 S100A6P06703 90 aa14.67□□□□□ -0.06
RBFOX2-209ENST00000438146 NKAPP1Q8N9T2 125 aa14.67□□□□□ -0.06
RBFOX2-209ENST00000438146 E9PLD3 99 aa14.66□□□□□ -0.06
RBFOX2-209ENST00000438146 S100A2P29034 98 aa14.66□□□□□ -0.06
RBFOX2-209ENST00000438146 RPL37AP8A6NKH3 93 aa14.65□□□□□ -0.06
RBFOX2-209ENST00000438146 TP73-AS1Q9UF72 201 aa14.65□□□□□ -0.06
RBFOX2-209ENST00000438146 MIR7-3HGQ8N6C7 128 aa14.64□□□□□ -0.07
RBFOX2-209ENST00000438146 Q8NDZ9 215 aa14.64□□□□□ -0.07
RBFOX2-209ENST00000438146 LINC00167Q96N53 147 aa14.64□□□□□ -0.07
RBFOX2-209ENST00000438146 HIST1H2BLQ99880 126 aa14.64□□□□□ -0.07
RBFOX2-209ENST00000438146 C20orf202A1L168 122 aa14.63□□□□□ -0.07
RBFOX2-209ENST00000438146 J3QL48 77 aa14.63□□□□□ -0.07
RBFOX2-209ENST00000438146 LRP1Q07954 4544 aaKnown RBP14.63□□□□□ -0.07
RBFOX2-209ENST00000438146 IGLV5-37A0A075B6J1 123 aa14.62□□□□□ -0.07
RBFOX2-209ENST00000438146 KRTAP29-1A8MX34 341 aaPredicted RBP14.62□□□□□ -0.07
RBFOX2-209ENST00000438146 VPREB1P12018 145 aa14.62□□□□□ -0.07
RBFOX2-209ENST00000438146 NMUP48645 174 aa14.62□□□□□ -0.07
RBFOX2-209ENST00000438146 ATOH7Q8N100 152 aa14.62□□□□□ -0.07
RBFOX2-209ENST00000438146 LINC00587B1AMM8 73 aa14.61□□□□□ -0.07
RBFOX2-209ENST00000438146 IGLV7-43P04211 117 aa14.61□□□□□ -0.07
RBFOX2-209ENST00000438146 SRSF9Q13242 221 aaKnown RBP eCLIP14.61□□□□□ -0.07
RBFOX2-209ENST00000438146 SPINK6Q6UWN8 80 aa14.61□□□□□ -0.07
RBFOX2-209ENST00000438146 DAND5Q8N907 189 aa14.61□□□□□ -0.07
RBFOX2-209ENST00000438146 SNRPEP62304 92 aaKnown RBP14.6□□□□□ -0.07
RBFOX2-209ENST00000438146 RPL24P83731 157 aaKnown RBP14.6□□□□□ -0.07
RBFOX2-209ENST00000438146 IGKV2D-26A0A0A0MRZ7 120 aa14.59□□□□□ -0.07
RBFOX2-209ENST00000438146 FAT3Q8TDW7 4589 aa14.58□□□□□ -0.08
RBFOX2-209ENST00000438146 IGKV2-28A0A075B6P5 120 aa14.57□□□□□ -0.08
RBFOX2-209ENST00000438146 OXTP01178 125 aa14.57□□□□□ -0.08
RBFOX2-209ENST00000438146 IGKV2D-28P01615 120 aa14.57□□□□□ -0.08
RBFOX2-209ENST00000438146 BOD1L2Q8IYS8 172 aa14.57□□□□□ -0.08
RBFOX2-209ENST00000438146 A0A0J9YXY3 114 aa14.56□□□□□ -0.08
RBFOX2-209ENST00000438146 TTTY13Q9BZ97 58 aa14.56□□□□□ -0.08
RBFOX2-209ENST00000438146 ANKRD39Q53RE8 183 aa14.53□□□□□ -0.08
RBFOX2-209ENST00000438146 ZNF815PA8K554 130 aa14.52□□□□□ -0.08
RBFOX2-209ENST00000438146 NCR3O14931 201 aa14.52□□□□□ -0.08
RBFOX2-209ENST00000438146 DMBT1Q9UGM3 2413 aaPredicted RBP14.51□□□□□ -0.09
RBFOX2-209ENST00000438146 C5orf52A6NGY3 159 aa14.51□□□□□ -0.09
RBFOX2-209ENST00000438146 ADAMTSL4-AS1Q5T5F5 129 aa14.51□□□□□ -0.09
RBFOX2-209ENST00000438146 NPC2P61916 151 aa14.5□□□□□ -0.09
RBFOX2-209ENST00000438146 REG3GQ6UW15 175 aa14.5□□□□□ -0.09
RBFOX2-209ENST00000438146 IGLV1-50A0A075B6I6 118 aa14.49□□□□□ -0.09
RBFOX2-209ENST00000438146 BCE1O60756 84 aa14.49□□□□□ -0.09
RBFOX2-209ENST00000438146 DIRC1Q969H9 104 aa14.49□□□□□ -0.09
RBFOX2-209ENST00000438146 TMEM238C9JI98 176 aa14.47□□□□□ -0.09
RBFOX2-209ENST00000438146 M0R378 163 aa14.47□□□□□ -0.09
RBFOX2-209ENST00000438146 MIEN1Q9BRT3 115 aa14.47□□□□□ -0.09
RBFOX2-209ENST00000438146 HERC1Q15751 4861 aa14.47□□□□□ -0.09
RBFOX2-209ENST00000438146 AKR1D1P51857 326 aa14.47□□□□□ -0.09
RBFOX2-209ENST00000438146 H0Y9J4 135 aa14.46□□□□□ -0.1
RBFOX2-209ENST00000438146 ZNF861PO60384 105 aa14.46□□□□□ -0.1
RBFOX2-209ENST00000438146 EIF4EBP3O60516 100 aaPredicted RBP14.45□□□□□ -0.1
RBFOX2-209ENST00000438146 SOSTDC1Q6X4U4 206 aa14.45□□□□□ -0.1
RBFOX2-209ENST00000438146 MT1HL1P0DM35 61 aa14.44□□□□□ -0.1
RBFOX2-209ENST00000438146 LINC01600Q96MT4 127 aa14.44□□□□□ -0.1
RBFOX2-209ENST00000438146 LITAFQ99732 161 aa14.44□□□□□ -0.1
RBFOX2-209ENST00000438146 LOC107984156A0A0G2JMH3 177 aa14.43□□□□□ -0.1
RBFOX2-209ENST00000438146 PCP2Q8IVA1 136 aa14.43□□□□□ -0.1
RBFOX2-209ENST00000438146 ARL17AQ8IVW1 177 aa14.43□□□□□ -0.1
RBFOX2-209ENST00000438146 TMEM126AQ9H061 195 aa14.43□□□□□ -0.1
RBFOX2-209ENST00000438146 SCGB1D1O95968 90 aa14.42□□□□□ -0.1
RBFOX2-209ENST00000438146 RPL28P46779 137 aaKnown RBP14.42□□□□□ -0.1
RBFOX2-209ENST00000438146 UBE2AP49459 152 aa14.42□□□□□ -0.1
RBFOX2-209ENST00000438146 SCGB1D4Q6XE38 83 aa14.41□□□□□ -0.1
RBFOX2-209ENST00000438146 TIMM17BO60830 172 aa14.4□□□□□ -0.1
RBFOX2-209ENST00000438146 PRLHP81277 87 aa14.39□□□□□ -0.11
RBFOX2-209ENST00000438146 FAM19A1Q7Z5A9 133 aa14.39□□□□□ -0.11
RBFOX2-209ENST00000438146 TRBV10-3A0A0K0K1G6 114 aa14.38□□□□□ -0.11
RBFOX2-209ENST00000438146 HSBP1L1C9JCN9 74 aa14.38□□□□□ -0.11
RBFOX2-209ENST00000438146 LINC00308Q8TCZ7 52 aa14.38□□□□□ -0.11
RBFOX2-209ENST00000438146 KRTAP13-1Q8IUC0 172 aa14.36□□□□□ -0.11
RBFOX2-209ENST00000438146 SPANXB1Q9NS25 103 aaPredicted RBP14.36□□□□□ -0.11
RBFOX2-209ENST00000438146 TMA7Q9Y2S6 64 aaKnown RBP14.35□□□□□ -0.11
RBFOX2-209ENST00000438146 NDUFC2O95298 119 aa14.34□□□□□ -0.11
RBFOX2-209ENST00000438146 TRBV10-2A0A0K0K1G8 114 aa14.34□□□□□ -0.11
RBFOX2-209ENST00000438146 DDTP30046 118 aa14.34□□□□□ -0.11
RBFOX2-209ENST00000438146 PRYO14603 147 aa14.33□□□□□ -0.12
RBFOX2-209ENST00000438146 KRTAP1-4P0C5Y4 121 aa14.33□□□□□ -0.12
RBFOX2-209ENST00000438146 S100A7L2Q5SY68 101 aa14.32□□□□□ -0.12
RBFOX2-209ENST00000438146 PRR26Q8N8Z3 221 aa14.32□□□□□ -0.12
RBFOX2-209ENST00000438146 KCNQ1DNQ9H478 68 aa14.32□□□□□ -0.12
RBFOX2-209ENST00000438146 KRTAP10-8P60410 259 aa14.31□□□□□ -0.12
RBFOX2-209ENST00000438146 SPANXDQ9BXN6 97 aa14.3□□□□□ -0.12
RBFOX2-209ENST00000438146 SPANXCQ9NY87 97 aa14.3□□□□□ -0.12
RBFOX2-209ENST00000438146 S100A12P80511 92 aa14.28□□□□□ -0.12
RBFOX2-209ENST00000438146 HIGD2AQ9BW72 106 aa14.27□□□□□ -0.12
RBFOX2-209ENST00000438146 IGLV6-57P01721 117 aa14.26□□□□□ -0.13
RBFOX2-209ENST00000438146 SPRR1AP35321 89 aa14.26□□□□□ -0.13
RBFOX2-209ENST00000438146 ETDCA0A1B0GVM5 59 aa14.25□□□□□ -0.13
RBFOX2-209ENST00000438146 TNXBP22105 4242 aa14.25□□□□□ -0.13
RBFOX2-209ENST00000438146 LINC00337Q8N6G1 96 aa14.24□□□□□ -0.13
RBFOX2-209ENST00000438146 OR13C6PQ8NH95 151 aa14.24□□□□□ -0.13
RBFOX2-209ENST00000438146 ANAPC11Q9NYG5 84 aa14.24□□□□□ -0.13
RBFOX2-209ENST00000438146 TRAV23DV6A0A075B6W5 121 aa14.22□□□□□ -0.13
RBFOX2-209ENST00000438146 KRTAP4-16G5E9R7 235 aaPredicted RBP14.22□□□□□ -0.13
RBFOX2-209ENST00000438146 MUSTN1Q8IVN3 82 aa14.22□□□□□ -0.13
RBFOX2-209ENST00000438146 IFITM1P13164 125 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms