RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 C1orf43Q9BWL3 253 aa11.18□□□□□ -0.62
LIMK1-203ENST00000435201 TRAV10A0A0B4J240 114 aa11.17□□□□□ -0.62
LIMK1-203ENST00000435201 LINC00167Q96N53 147 aa11.17□□□□□ -0.62
LIMK1-203ENST00000435201 ORMDL1Q9P0S3 153 aa11.17□□□□□ -0.62
LIMK1-203ENST00000435201 TENM3Q9P273 2699 aa11.17□□□□□ -0.62
LIMK1-203ENST00000435201 BAHCC1Q9P281 2608 aa11.17□□□□□ -0.62
LIMK1-203ENST00000435201 CAMK2N2Q96S95 79 aa11.17□□□□□ -0.62
LIMK1-203ENST00000435201 TM2D3Q9BRN9 247 aa11.17□□□□□ -0.62
LIMK1-203ENST00000435201 C2orf48Q96LS8 159 aa11.16□□□□□ -0.62
LIMK1-203ENST00000435201 HIGD2BQ4VC39 106 aa11.15□□□□□ -0.62
LIMK1-203ENST00000435201 C15orf56Q8N910 161 aa11.15□□□□□ -0.62
LIMK1-203ENST00000435201 DNAH10OSP0CZ25 163 aa11.15□□□□□ -0.63
LIMK1-203ENST00000435201 Q8N814 137 aa11.15□□□□□ -0.63
LIMK1-203ENST00000435201 F8WDY8 70 aa11.14□□□□□ -0.63
LIMK1-203ENST00000435201 IGLV6-57P01721 117 aa11.14□□□□□ -0.63
LIMK1-203ENST00000435201 GAGE2BQ13066 116 aa11.14□□□□□ -0.63
LIMK1-203ENST00000435201 GAGE2EQ4V326 116 aa11.14□□□□□ -0.63
LIMK1-203ENST00000435201 C6orf99Q4VX62 202 aa11.14□□□□□ -0.63
LIMK1-203ENST00000435201 Q6Q795 121 aa11.14□□□□□ -0.63
LIMK1-203ENST00000435201 OBSCN-AS1Q96MR7 158 aa11.14□□□□□ -0.63
LIMK1-203ENST00000435201 GAGE2DQ9UEU5 116 aa11.14□□□□□ -0.63
LIMK1-203ENST00000435201 IGKV2D-24A0A075B6R9 120 aa11.12□□□□□ -0.63
LIMK1-203ENST00000435201 A0A1B0GV72 72 aa11.12□□□□□ -0.63
LIMK1-203ENST00000435201 RPL18AQ02543 176 aaKnown RBP11.12□□□□□ -0.63
LIMK1-203ENST00000435201 K7EIL1 84 aa11.12□□□□□ -0.63
LIMK1-203ENST00000435201 SLPIP03973 132 aa11.12□□□□□ -0.63
LIMK1-203ENST00000435201 TTC32Q5I0X7 151 aa11.12□□□□□ -0.63
LIMK1-203ENST00000435201 PRB2P02812 416 aaPredicted RBP11.11□□□□□ -0.63
LIMK1-203ENST00000435201 Q6ZRU5 148 aa11.1□□□□□ -0.63
LIMK1-203ENST00000435201 XAGE1AQ9HD64 81 aa11.1□□□□□ -0.63
LIMK1-203ENST00000435201 GAGE2AQ6NT46 116 aa11.09□□□□□ -0.63
LIMK1-203ENST00000435201 NDUFC2-KCTD14E9PQ53 114 aa11.08□□□□□ -0.64
LIMK1-203ENST00000435201 TMEM256-PLSCR3K7ERE1 68 aa11.08□□□□□ -0.64
LIMK1-203ENST00000435201 LINC00575Q6W349 94 aa11.08□□□□□ -0.64
LIMK1-203ENST00000435201 HUWE1Q7Z6Z7 4374 aaKnown RBP11.08□□□□□ -0.64
LIMK1-203ENST00000435201 COL6A5A8TX70 2615 aa11.08□□□□□ -0.64
LIMK1-203ENST00000435201 C9orf129Q5T035 196 aaKnown RBP11.08□□□□□ -0.64
LIMK1-203ENST00000435201 SDIM1Q6ZPB5 146 aa11.08□□□□□ -0.64
LIMK1-203ENST00000435201 MRAPQ8TCY5 172 aa11.08□□□□□ -0.64
LIMK1-203ENST00000435201 C14orf132Q9NPU4 83 aa11.08□□□□□ -0.64
LIMK1-203ENST00000435201 NOTCH1P46531 2555 aa11.07□□□□□ -0.64
LIMK1-203ENST00000435201 LINC00643Q86TS7 51 aa11.07□□□□□ -0.64
LIMK1-203ENST00000435201 LINC00588Q9Y4M8 146 aa11.07□□□□□ -0.64
LIMK1-203ENST00000435201 TRAV23DV6A0A075B6W5 121 aa11.06□□□□□ -0.64
LIMK1-203ENST00000435201 TRBV7-7A0A0K0K1E9 115 aa11.06□□□□□ -0.64
LIMK1-203ENST00000435201 TRBV10-3A0A0K0K1G6 114 aa11.06□□□□□ -0.64
LIMK1-203ENST00000435201 JMJD7-PLA2G4BH0Y9G9 81 aa11.06□□□□□ -0.64
LIMK1-203ENST00000435201 hADV29S1A0JD25 119 aa11.05□□□□□ -0.64
LIMK1-203ENST00000435201 VPREB1P12018 145 aa11.05□□□□□ -0.64
LIMK1-203ENST00000435201 SYCNQ0VAF6 134 aa11.04□□□□□ -0.64
LIMK1-203ENST00000435201 SMCR5Q8TEV8 140 aa11.04□□□□□ -0.64
LIMK1-203ENST00000435201 DIRC1Q969H9 104 aa11.04□□□□□ -0.64
LIMK1-203ENST00000435201 M0R378 163 aa11.03□□□□□ -0.64
LIMK1-203ENST00000435201 IMUPQ9GZP8 106 aa11.03□□□□□ -0.64
LIMK1-203ENST00000435201 RMI2Q96E14 147 aa11.02□□□□□ -0.65
LIMK1-203ENST00000435201 ANAPC13Q9BS18 74 aa11.02□□□□□ -0.65
LIMK1-203ENST00000435201 NBEAL1Q6ZS30 2694 aa11.01□□□□□ -0.65
LIMK1-203ENST00000435201 TRBV7-6A0A0J9YX20 115 aa11.01□□□□□ -0.65
LIMK1-203ENST00000435201 H3BQ85 93 aa11.01□□□□□ -0.65
LIMK1-203ENST00000435201 ZNF73O43830 326 aaPredicted RBP11.01□□□□□ -0.65
LIMK1-203ENST00000435201 UPK3BQ9BT76 320 aa11.01□□□□□ -0.65
LIMK1-203ENST00000435201 NDUFV3P56181 108 aaKnown RBP11□□□□□ -0.65
LIMK1-203ENST00000435201 Q6ZRP5 223 aa11□□□□□ -0.65
LIMK1-203ENST00000435201 DNAH1Q9P2D7 4330 aa11□□□□□ -0.65
LIMK1-203ENST00000435201 CCKP06307 115 aa10.98□□□□□ -0.65
LIMK1-203ENST00000435201 COX7BP24311 80 aa10.98□□□□□ -0.65
LIMK1-203ENST00000435201 TLX1NBP0CAT3 122 aa10.97□□□□□ -0.65
LIMK1-203ENST00000435201 ELOF1P60002 83 aaKnown RBP10.97□□□□□ -0.65
LIMK1-203ENST00000435201 USP17L23D6RBM5 183 aa10.95□□□□□ -0.66
LIMK1-203ENST00000435201 GHRHP01286 108 aa10.95□□□□□ -0.66
LIMK1-203ENST00000435201 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.95□□□□□ -0.66
LIMK1-203ENST00000435201 Q6ZQY7 126 aa10.95□□□□□ -0.66
LIMK1-203ENST00000435201 LINC00846Q9NV44 126 aa10.94□□□□□ -0.66
LIMK1-203ENST00000435201 NHLRC4P0CG21 123 aaPredicted RBP10.92□□□□□ -0.66
LIMK1-203ENST00000435201 RBM3P98179 157 aaKnown RBP10.92□□□□□ -0.66
LIMK1-203ENST00000435201 NKAPP1Q8N9T2 125 aa10.92□□□□□ -0.66
LIMK1-203ENST00000435201 PLA2G2DQ9UNK4 145 aa10.92□□□□□ -0.66
LIMK1-203ENST00000435201 Q6JHZ5 121 aa10.91□□□□□ -0.66
LIMK1-203ENST00000435201 LAMTOR3Q9UHA4 124 aa10.91□□□□□ -0.66
LIMK1-203ENST00000435201 CASC10Q5T4H9 136 aa10.91□□□□□ -0.66
LIMK1-203ENST00000435201 LOC110117498A0A087WWA1 95 aa10.89□□□□□ -0.67
LIMK1-203ENST00000435201 LINC00528Q8N1L1 170 aa10.89□□□□□ -0.67
LIMK1-203ENST00000435201 DNAH9Q9NYC9 4486 aa10.89□□□□□ -0.67
LIMK1-203ENST00000435201 MGAM2Q2M2H8 2515 aa10.89□□□□□ -0.67
LIMK1-203ENST00000435201 SERTAD4-AS1Q5TG53 156 aa10.88□□□□□ -0.67
LIMK1-203ENST00000435201 KCNQ1DNQ9H478 68 aa10.88□□□□□ -0.67
LIMK1-203ENST00000435201 FAM236AA0A1B0GUQ0 79 aa10.87□□□□□ -0.67
LIMK1-203ENST00000435201 FAM236BA0A1B0GV22 79 aa10.87□□□□□ -0.67
LIMK1-203ENST00000435201 IGLV5-37A0A075B6J1 123 aa10.87□□□□□ -0.67
LIMK1-203ENST00000435201 PDE6GP18545 87 aa10.87□□□□□ -0.67
LIMK1-203ENST00000435201 Q6ZQT0 140 aa10.87□□□□□ -0.67
LIMK1-203ENST00000435201 C7orf33Q8WU49 177 aa10.87□□□□□ -0.67
LIMK1-203ENST00000435201 DSCR8Q96T75 97 aa10.86□□□□□ -0.67
LIMK1-203ENST00000435201 B9D2Q9BPU9 175 aa10.85□□□□□ -0.67
LIMK1-203ENST00000435201 MDFIQ99750 246 aa10.85□□□□□ -0.67
LIMK1-203ENST00000435201 DYNC2H1Q8NCM8 4307 aaKnown RBP10.85□□□□□ -0.67
LIMK1-203ENST00000435201 LOC107984640A0A0U1RRK4 108 aa10.83□□□□□ -0.68
LIMK1-203ENST00000435201 ATP5EP2Q5VTU8 51 aa10.83□□□□□ -0.68
LIMK1-203ENST00000435201 IGKV3D-7A0A0C4DH55 119 aa10.83□□□□□ -0.68
LIMK1-203ENST00000435201 UBE2DNLQ8IWF7 75 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms