RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 LINC00587B1AMM8 73 aa11.51□□□□□ -0.57
DDR1-236ENST00000431373 SMIM13P0DJ93 91 aa11.51□□□□□ -0.57
DDR1-236ENST00000431373 UBE2BP63146 152 aa11.51□□□□□ -0.57
DDR1-236ENST00000431373 TP73-AS1Q9UF72 201 aa11.51□□□□□ -0.57
DDR1-236ENST00000431373 PSORS1C2Q9UIG4 136 aa11.51□□□□□ -0.57
DDR1-236ENST00000431373 LBHQ53QV2 105 aaPredicted RBP11.5□□□□□ -0.57
DDR1-236ENST00000431373 IGLV5-37A0A075B6J1 123 aa11.49□□□□□ -0.57
DDR1-236ENST00000431373 SNRPEP62304 92 aaKnown RBP11.49□□□□□ -0.57
DDR1-236ENST00000431373 MRPL55Q7Z7F7 128 aaKnown RBP11.49□□□□□ -0.57
DDR1-236ENST00000431373 AKR1D1P51857 326 aa11.48□□□□□ -0.57
DDR1-236ENST00000431373 KRTAP11-1Q8IUC1 163 aa11.48□□□□□ -0.57
DDR1-236ENST00000431373 NKAPP1Q8N9T2 125 aa11.47□□□□□ -0.57
DDR1-236ENST00000431373 C1orf137Q5JT78 98 aa11.46□□□□□ -0.57
DDR1-236ENST00000431373 MIR7-3HGQ8N6C7 128 aa11.46□□□□□ -0.57
DDR1-236ENST00000431373 C5orf52A6NGY3 159 aa11.45□□□□□ -0.58
DDR1-236ENST00000431373 VPREB1P12018 145 aa11.45□□□□□ -0.58
DDR1-236ENST00000431373 RPL24P83731 157 aaKnown RBP11.45□□□□□ -0.58
DDR1-236ENST00000431373 PKHD1L1Q86WI1 4243 aa11.44□□□□□ -0.58
DDR1-236ENST00000431373 ATOH7Q8N100 152 aa11.44□□□□□ -0.58
DDR1-236ENST00000431373 LINC00167Q96N53 147 aa11.44□□□□□ -0.58
DDR1-236ENST00000431373 IGKV2D-26A0A0A0MRZ7 120 aa11.43□□□□□ -0.58
DDR1-236ENST00000431373 A0A0J9YXY3 114 aa11.42□□□□□ -0.58
DDR1-236ENST00000431373 GAGE10A6NGK3 116 aa11.42□□□□□ -0.58
DDR1-236ENST00000431373 Q8NDZ9 215 aa11.42□□□□□ -0.58
DDR1-236ENST00000431373 SRSF9Q13242 221 aaKnown RBP eCLIP11.41□□□□□ -0.58
DDR1-236ENST00000431373 SPINK6Q6UWN8 80 aa11.41□□□□□ -0.58
DDR1-236ENST00000431373 RPL37AP8A6NKH3 93 aa11.4□□□□□ -0.58
DDR1-236ENST00000431373 IGLV7-43P04211 117 aa11.4□□□□□ -0.58
DDR1-236ENST00000431373 ANKRD39Q53RE8 183 aa11.4□□□□□ -0.58
DDR1-236ENST00000431373 DAND5Q8N907 189 aa11.4□□□□□ -0.58
DDR1-236ENST00000431373 ZNF815PA8K554 130 aa11.39□□□□□ -0.59
DDR1-236ENST00000431373 KRTAP29-1A8MX34 341 aaPredicted RBP11.39□□□□□ -0.59
DDR1-236ENST00000431373 BOD1L2Q8IYS8 172 aa11.39□□□□□ -0.59
DDR1-236ENST00000431373 MYCBP2O75592 4640 aa11.38□□□□□ -0.59
DDR1-236ENST00000431373 OXTP01178 125 aa11.38□□□□□ -0.59
DDR1-236ENST00000431373 TTTY13Q9BZ97 58 aa11.38□□□□□ -0.59
DDR1-236ENST00000431373 LOC107984156A0A0G2JMH3 177 aa11.37□□□□□ -0.59
DDR1-236ENST00000431373 ARL17AQ8IVW1 177 aa11.37□□□□□ -0.59
DDR1-236ENST00000431373 IGKV2-28A0A075B6P5 120 aa11.36□□□□□ -0.59
DDR1-236ENST00000431373 IGKV2D-28P01615 120 aa11.36□□□□□ -0.59
DDR1-236ENST00000431373 MIEN1Q9BRT3 115 aa11.36□□□□□ -0.59
DDR1-236ENST00000431373 IGLV1-50A0A075B6I6 118 aa11.35□□□□□ -0.59
DDR1-236ENST00000431373 M0R378 163 aa11.35□□□□□ -0.59
DDR1-236ENST00000431373 TIMM17BO60830 172 aa11.35□□□□□ -0.59
DDR1-236ENST00000431373 ADAMTSL4-AS1Q5T5F5 129 aa11.35□□□□□ -0.59
DDR1-236ENST00000431373 J3QL48 77 aa11.34□□□□□ -0.59
DDR1-236ENST00000431373 HSBP1L1C9JCN9 74 aa11.33□□□□□ -0.6
DDR1-236ENST00000431373 NCR3O14931 201 aa11.33□□□□□ -0.6
DDR1-236ENST00000431373 BCE1O60756 84 aa11.33□□□□□ -0.6
DDR1-236ENST00000431373 SCGB1D1O95968 90 aa11.33□□□□□ -0.6
DDR1-236ENST00000431373 REG3GQ6UW15 175 aa11.33□□□□□ -0.6
DDR1-236ENST00000431373 LITAFQ99732 161 aa11.33□□□□□ -0.6
DDR1-236ENST00000431373 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
DDR1-236ENST00000431373 DIRC1Q969H9 104 aa11.32□□□□□ -0.6
DDR1-236ENST00000431373 NPC2P61916 151 aa11.31□□□□□ -0.6
DDR1-236ENST00000431373 SCGB1D4Q6XE38 83 aa11.31□□□□□ -0.6
DDR1-236ENST00000431373 SOSTDC1Q6X4U4 206 aa11.3□□□□□ -0.6
DDR1-236ENST00000431373 PCP2Q8IVA1 136 aa11.3□□□□□ -0.6
DDR1-236ENST00000431373 H0Y9J4 135 aa11.29□□□□□ -0.6
DDR1-236ENST00000431373 ZNF861PO60384 105 aa11.29□□□□□ -0.6
DDR1-236ENST00000431373 NDUFC2O95298 119 aa11.29□□□□□ -0.6
DDR1-236ENST00000431373 LRP1Q07954 4544 aaKnown RBP11.28□□□□□ -0.6
DDR1-236ENST00000431373 HERC1Q15751 4861 aa11.28□□□□□ -0.6
DDR1-236ENST00000431373 TRBV10-2A0A0K0K1G8 114 aa11.28□□□□□ -0.6
DDR1-236ENST00000431373 TMEM238C9JI98 176 aa11.28□□□□□ -0.6
DDR1-236ENST00000431373 EIF4EBP3O60516 100 aaPredicted RBP11.28□□□□□ -0.6
DDR1-236ENST00000431373 RPL28P46779 137 aaKnown RBP11.28□□□□□ -0.6
DDR1-236ENST00000431373 LINC00308Q8TCZ7 52 aa11.28□□□□□ -0.6
DDR1-236ENST00000431373 TMEM126AQ9H061 195 aa11.28□□□□□ -0.6
DDR1-236ENST00000431373 SPANXB1Q9NS25 103 aaPredicted RBP11.28□□□□□ -0.6
DDR1-236ENST00000431373 TMA7Q9Y2S6 64 aaKnown RBP11.28□□□□□ -0.6
DDR1-236ENST00000431373 FAT3Q8TDW7 4589 aa11.26□□□□□ -0.61
DDR1-236ENST00000431373 UBE2AP49459 152 aa11.26□□□□□ -0.61
DDR1-236ENST00000431373 LINC01600Q96MT4 127 aa11.26□□□□□ -0.61
DDR1-236ENST00000431373 SPANXDQ9BXN6 97 aa11.26□□□□□ -0.61
DDR1-236ENST00000431373 SPANXCQ9NY87 97 aa11.26□□□□□ -0.61
DDR1-236ENST00000431373 TRBV10-3A0A0K0K1G6 114 aa11.25□□□□□ -0.61
DDR1-236ENST00000431373 PRYO14603 147 aa11.25□□□□□ -0.61
DDR1-236ENST00000431373 KRTAP13-1Q8IUC0 172 aa11.24□□□□□ -0.61
DDR1-236ENST00000431373 DDTP30046 118 aa11.23□□□□□ -0.61
DDR1-236ENST00000431373 FAM19A1Q7Z5A9 133 aa11.23□□□□□ -0.61
DDR1-236ENST00000431373 KCNQ1DNQ9H478 68 aa11.23□□□□□ -0.61
DDR1-236ENST00000431373 MT1HL1P0DM35 61 aa11.22□□□□□ -0.61
DDR1-236ENST00000431373 S100A12P80511 92 aa11.22□□□□□ -0.61
DDR1-236ENST00000431373 PRLHP81277 87 aa11.21□□□□□ -0.61
DDR1-236ENST00000431373 JOSD1Q15040 202 aaPredicted RBP11.21□□□□□ -0.61
DDR1-236ENST00000431373 S100A7L2Q5SY68 101 aa11.21□□□□□ -0.61
DDR1-236ENST00000431373 Q6ZVH6 145 aa11.21□□□□□ -0.61
DDR1-236ENST00000431373 COPS9Q8WXC6 57 aa11.21□□□□□ -0.61
DDR1-236ENST00000431373 IFITM1P13164 125 aa11.2□□□□□ -0.62
DDR1-236ENST00000431373 IGLV6-57P01721 117 aa11.19□□□□□ -0.62
DDR1-236ENST00000431373 SPRR1AP35321 89 aa11.19□□□□□ -0.62
DDR1-236ENST00000431373 LINC00337Q8N6G1 96 aa11.18□□□□□ -0.62
DDR1-236ENST00000431373 PPDPFQ9H3Y8 114 aa11.18□□□□□ -0.62
DDR1-236ENST00000431373 KRTAP1-4P0C5Y4 121 aa11.17□□□□□ -0.62
DDR1-236ENST00000431373 ETDCA0A1B0GVM5 59 aa11.16□□□□□ -0.62
DDR1-236ENST00000431373 COX8AP10176 69 aa11.16□□□□□ -0.62
DDR1-236ENST00000431373 MUSTN1Q8IVN3 82 aa11.16□□□□□ -0.62
DDR1-236ENST00000431373 VAMP8Q9BV40 100 aa11.16□□□□□ -0.62
DDR1-236ENST00000431373 PAM16Q9Y3D7 125 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms