RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 A0A1B0GX51 115 aa9.29□□□□□ -0.92
HOXC4-202ENST00000430889 K7EIL1 84 aa9.29□□□□□ -0.92
HOXC4-202ENST00000430889 LECT2O14960 151 aa9.29□□□□□ -0.92
HOXC4-202ENST00000430889 NCR3O14931 201 aa9.28□□□□□ -0.92
HOXC4-202ENST00000430889 DNAH1Q9P2D7 4330 aa9.27□□□□□ -0.92
HOXC4-202ENST00000430889 DNAL4O96015 105 aa9.27□□□□□ -0.93
HOXC4-202ENST00000430889 DNAH10OSP0CZ25 163 aa9.27□□□□□ -0.93
HOXC4-202ENST00000430889 IGLV6-57P01721 117 aa9.26□□□□□ -0.93
HOXC4-202ENST00000430889 C2orf48Q96LS8 159 aa9.26□□□□□ -0.93
HOXC4-202ENST00000430889 TRAV10A0A0B4J240 114 aa9.26□□□□□ -0.93
HOXC4-202ENST00000430889 PRB2P02812 416 aaPredicted RBP9.26□□□□□ -0.93
HOXC4-202ENST00000430889 C9orf129Q5T035 196 aaKnown RBP9.26□□□□□ -0.93
HOXC4-202ENST00000430889 SDIM1Q6ZPB5 146 aa9.26□□□□□ -0.93
HOXC4-202ENST00000430889 ACYP1P07311 99 aa9.25□□□□□ -0.93
HOXC4-202ENST00000430889 HIGD2BQ4VC39 106 aa9.25□□□□□ -0.93
HOXC4-202ENST00000430889 C15orf53Q8NAA6 179 aa9.25□□□□□ -0.93
HOXC4-202ENST00000430889 INAFM2P0DMQ5 153 aa9.24□□□□□ -0.93
HOXC4-202ENST00000430889 Q8N814 137 aa9.24□□□□□ -0.93
HOXC4-202ENST00000430889 COL6A5A8TX70 2615 aa9.24□□□□□ -0.93
HOXC4-202ENST00000430889 NOTCH1P46531 2555 aa9.23□□□□□ -0.93
HOXC4-202ENST00000430889 F8WDY8 70 aa9.23□□□□□ -0.93
HOXC4-202ENST00000430889 Q6Q795 121 aa9.23□□□□□ -0.93
HOXC4-202ENST00000430889 Q6ZRU5 148 aa9.23□□□□□ -0.93
HOXC4-202ENST00000430889 C1orf43Q9BWL3 253 aa9.23□□□□□ -0.93
HOXC4-202ENST00000430889 ZNF561-AS1K7EIQ3 104 aa9.23□□□□□ -0.93
HOXC4-202ENST00000430889 SLPIP03973 132 aa9.23□□□□□ -0.93
HOXC4-202ENST00000430889 C6orf99Q4VX62 202 aa9.23□□□□□ -0.93
HOXC4-202ENST00000430889 CAMK2N2Q96S95 79 aa9.23□□□□□ -0.93
HOXC4-202ENST00000430889 ORMDL1Q9P0S3 153 aa9.22□□□□□ -0.93
HOXC4-202ENST00000430889 LINC00588Q9Y4M8 146 aa9.22□□□□□ -0.93
HOXC4-202ENST00000430889 SNCGO76070 127 aa9.21□□□□□ -0.93
HOXC4-202ENST00000430889 RPL18AQ02543 176 aaKnown RBP9.21□□□□□ -0.93
HOXC4-202ENST00000430889 S100A7L2Q5SY68 101 aa9.21□□□□□ -0.93
HOXC4-202ENST00000430889 LINC00575Q6W349 94 aa9.21□□□□□ -0.93
HOXC4-202ENST00000430889 NBEAL1Q6ZS30 2694 aa9.21□□□□□ -0.94
HOXC4-202ENST00000430889 VPREB1P12018 145 aa9.2□□□□□ -0.94
HOXC4-202ENST00000430889 SMCR5Q8TEV8 140 aa9.2□□□□□ -0.94
HOXC4-202ENST00000430889 TTC32Q5I0X7 151 aa9.2□□□□□ -0.94
HOXC4-202ENST00000430889 MDFIQ99750 246 aa9.2□□□□□ -0.94
HOXC4-202ENST00000430889 XAGE1AQ9HD64 81 aa9.2□□□□□ -0.94
HOXC4-202ENST00000430889 IGKV2D-24A0A075B6R9 120 aa9.19□□□□□ -0.94
HOXC4-202ENST00000430889 NDUFC2-KCTD14E9PQ53 114 aa9.19□□□□□ -0.94
HOXC4-202ENST00000430889 DNAH9Q9NYC9 4486 aa9.18□□□□□ -0.94
HOXC4-202ENST00000430889 TRBV7-7A0A0K0K1E9 115 aa9.17□□□□□ -0.94
HOXC4-202ENST00000430889 TRBV10-3A0A0K0K1G6 114 aa9.17□□□□□ -0.94
HOXC4-202ENST00000430889 DYNC2H1Q8NCM8 4307 aaKnown RBP9.17□□□□□ -0.94
HOXC4-202ENST00000430889 GAGE2BQ13066 116 aa9.16□□□□□ -0.94
HOXC4-202ENST00000430889 GAGE2EQ4V326 116 aa9.16□□□□□ -0.94
HOXC4-202ENST00000430889 MRAPQ8TCY5 172 aa9.16□□□□□ -0.94
HOXC4-202ENST00000430889 UPK3BQ9BT76 320 aa9.16□□□□□ -0.94
HOXC4-202ENST00000430889 C14orf132Q9NPU4 83 aa9.16□□□□□ -0.94
HOXC4-202ENST00000430889 GAGE2DQ9UEU5 116 aa9.16□□□□□ -0.94
HOXC4-202ENST00000430889 TRAV23DV6A0A075B6W5 121 aa9.15□□□□□ -0.94
HOXC4-202ENST00000430889 Q6ZRP5 223 aa9.15□□□□□ -0.94
HOXC4-202ENST00000430889 TMEM256-PLSCR3K7ERE1 68 aa9.14□□□□□ -0.95
HOXC4-202ENST00000430889 SYCNQ0VAF6 134 aa9.14□□□□□ -0.95
HOXC4-202ENST00000430889 GAGE2AQ6NT46 116 aa9.14□□□□□ -0.95
HOXC4-202ENST00000430889 LINC00643Q86TS7 51 aa9.14□□□□□ -0.95
HOXC4-202ENST00000430889 TRBV7-6A0A0J9YX20 115 aa9.13□□□□□ -0.95
HOXC4-202ENST00000430889 A0A1B0GV72 72 aa9.13□□□□□ -0.95
HOXC4-202ENST00000430889 hADV29S1A0JD25 119 aa9.13□□□□□ -0.95
HOXC4-202ENST00000430889 M0R378 163 aa9.13□□□□□ -0.95
HOXC4-202ENST00000430889 TLX1NBP0CAT3 122 aa9.13□□□□□ -0.95
HOXC4-202ENST00000430889 DIRC1Q969H9 104 aa9.13□□□□□ -0.95
HOXC4-202ENST00000430889 JMJD7-PLA2G4BH0Y9G9 81 aa9.12□□□□□ -0.95
HOXC4-202ENST00000430889 CASC10Q5T4H9 136 aa9.12□□□□□ -0.95
HOXC4-202ENST00000430889 ZNF73O43830 326 aaPredicted RBP9.11□□□□□ -0.95
HOXC4-202ENST00000430889 NHLRC4P0CG21 123 aaPredicted RBP9.11□□□□□ -0.95
HOXC4-202ENST00000430889 ELOF1P60002 83 aaKnown RBP9.11□□□□□ -0.95
HOXC4-202ENST00000430889 IMUPQ9GZP8 106 aa9.11□□□□□ -0.95
HOXC4-202ENST00000430889 USP17L23D6RBM5 183 aa9.1□□□□□ -0.95
HOXC4-202ENST00000430889 CCKP06307 115 aa9.1□□□□□ -0.95
HOXC4-202ENST00000430889 NDUFV3P56181 108 aaKnown RBP9.1□□□□□ -0.95
HOXC4-202ENST00000430889 PLA2G2DQ9UNK4 145 aa9.09□□□□□ -0.95
HOXC4-202ENST00000430889 COL7A1Q02388 2944 aa9.09□□□□□ -0.95
HOXC4-202ENST00000430889 COX7BP24311 80 aa9.08□□□□□ -0.96
HOXC4-202ENST00000430889 LINC00846Q9NV44 126 aa9.08□□□□□ -0.96
HOXC4-202ENST00000430889 RMI2Q96E14 147 aa9.07□□□□□ -0.96
HOXC4-202ENST00000430889 DNHD1Q96M86 4753 aa9.07□□□□□ -0.96
HOXC4-202ENST00000430889 LOC100996750A0A140TA64 210 aa9.07□□□□□ -0.96
HOXC4-202ENST00000430889 H3BQ85 93 aa9.07□□□□□ -0.96
HOXC4-202ENST00000430889 LCE2BO14633 110 aa9.07□□□□□ -0.96
HOXC4-202ENST00000430889 Q6ZQY7 126 aa9.07□□□□□ -0.96
HOXC4-202ENST00000430889 LINC00528Q8N1L1 170 aa9.07□□□□□ -0.96
HOXC4-202ENST00000430889 KRTAP4-6Q9BYQ5 205 aa9.07□□□□□ -0.96
HOXC4-202ENST00000430889 MGAM2Q2M2H8 2515 aa9.06□□□□□ -0.96
HOXC4-202ENST00000430889 SERTAD4-AS1Q5TG53 156 aa9.06□□□□□ -0.96
HOXC4-202ENST00000430889 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.06□□□□□ -0.96
HOXC4-202ENST00000430889 IGLV5-37A0A075B6J1 123 aa9.05□□□□□ -0.96
HOXC4-202ENST00000430889 ANAPC13Q9BS18 74 aa9.05□□□□□ -0.96
HOXC4-202ENST00000430889 LOC110117498A0A087WWA1 95 aa9.04□□□□□ -0.96
HOXC4-202ENST00000430889 KCNQ1DNQ9H478 68 aa9.04□□□□□ -0.96
HOXC4-202ENST00000430889 Q6JHZ5 121 aa9.04□□□□□ -0.96
HOXC4-202ENST00000430889 Q6ZQT0 140 aa9.04□□□□□ -0.96
HOXC4-202ENST00000430889 KRTAP1-5Q9BYS1 174 aa9.04□□□□□ -0.96
HOXC4-202ENST00000430889 C7orf33Q8WU49 177 aa9.03□□□□□ -0.96
HOXC4-202ENST00000430889 B9D2Q9BPU9 175 aa9.03□□□□□ -0.96
HOXC4-202ENST00000430889 APLNQ9ULZ1 77 aa9.03□□□□□ -0.96
HOXC4-202ENST00000430889 DNAH10Q8IVF4 4471 aa9.02□□□□□ -0.96
HOXC4-202ENST00000430889 KRTAP7-1Q8IUC3 87 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms