RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 RPL32P62910 135 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-207ENST00000430841 RPL18AQ02543 176 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-207ENST00000430841 SYCNQ0VAF6 134 aa4.84□□□□□ -1.63
ECHDC1-207ENST00000430841 LINC00173Q6ZV60 143 aa4.84□□□□□ -1.63
ECHDC1-207ENST00000430841 LOC389332A0A1B0GUA5 103 aa4.83□□□□□ -1.64
ECHDC1-207ENST00000430841 K7ERU9 68 aa4.83□□□□□ -1.64
ECHDC1-207ENST00000430841 M0QY20 66 aa4.83□□□□□ -1.64
ECHDC1-207ENST00000430841 DPM2O94777 84 aa4.83□□□□□ -1.64
ECHDC1-207ENST00000430841 NPYP01303 97 aa4.83□□□□□ -1.64
ECHDC1-207ENST00000430841 IGKCP01834 107 aa4.83□□□□□ -1.64
ECHDC1-207ENST00000430841 FGF6P10767 208 aa4.83□□□□□ -1.64
ECHDC1-207ENST00000430841 RPL13AP40429 203 aaKnown RBP4.83□□□□□ -1.64
ECHDC1-207ENST00000430841 SS18Q15532 418 aa4.83□□□□□ -1.64
ECHDC1-207ENST00000430841 ERASQ7Z444 233 aa4.83□□□□□ -1.64
ECHDC1-207ENST00000430841 OR5A1Q8NGJ0 315 aa4.83□□□□□ -1.64
ECHDC1-207ENST00000430841 IGLV1-50A0A075B6I6 118 aa4.82□□□□□ -1.64
ECHDC1-207ENST00000430841 SRSF9Q13242 221 aaKnown RBP eCLIP4.82□□□□□ -1.64
ECHDC1-207ENST00000430841 C2orf91Q6ZV80 131 aa4.82□□□□□ -1.64
ECHDC1-207ENST00000430841 PRR26Q8N8Z3 221 aa4.82□□□□□ -1.64
ECHDC1-207ENST00000430841 A0A087WZ39 114 aa4.81□□□□□ -1.64
ECHDC1-207ENST00000430841 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-207ENST00000430841 H7C423 109 aa4.81□□□□□ -1.64
ECHDC1-207ENST00000430841 NCR2O95944 276 aa4.81□□□□□ -1.64
ECHDC1-207ENST00000430841 SMIM13P0DJ93 91 aa4.81□□□□□ -1.64
ECHDC1-207ENST00000430841 LINC00526Q96FQ7 95 aa4.81□□□□□ -1.64
ECHDC1-207ENST00000430841 CAMK2N2Q96S95 79 aa4.81□□□□□ -1.64
ECHDC1-207ENST00000430841 IGLV4-69A0A075B6H9 119 aa4.8□□□□□ -1.64
ECHDC1-207ENST00000430841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-207ENST00000430841 IGKV2-29A2NJV5 120 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-207ENST00000430841 H0Y8G0 127 aa4.8□□□□□ -1.64
ECHDC1-207ENST00000430841 SMAGPQ0VAQ4 97 aa4.8□□□□□ -1.64
ECHDC1-207ENST00000430841 NRACQ8N912 160 aa4.8□□□□□ -1.64
ECHDC1-207ENST00000430841 SMIM2Q9BVW6 85 aa4.8□□□□□ -1.64
ECHDC1-207ENST00000430841 IGLV5-37A0A075B6J1 123 aa4.79□□□□□ -1.64
ECHDC1-207ENST00000430841 F8VRH5 84 aa4.79□□□□□ -1.64
ECHDC1-207ENST00000430841 F8WDY8 70 aa4.79□□□□□ -1.64
ECHDC1-207ENST00000430841 K7EP34 96 aa4.79□□□□□ -1.64
ECHDC1-207ENST00000430841 APOMO95445 188 aa4.79□□□□□ -1.64
ECHDC1-207ENST00000430841 PRSS2P07478 247 aa4.79□□□□□ -1.64
ECHDC1-207ENST00000430841 FABP2P12104 132 aa4.79□□□□□ -1.64
ECHDC1-207ENST00000430841 UBE2BP63146 152 aa4.79□□□□□ -1.64
ECHDC1-207ENST00000430841 C9orf116Q5BN46 136 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-207ENST00000430841 TOMM6Q96B49 74 aa4.79□□□□□ -1.64
ECHDC1-207ENST00000430841 CST9LQ9H4G1 147 aa4.79□□□□□ -1.64
ECHDC1-207ENST00000430841 H0Y9J4 135 aa4.78□□□□□ -1.64
ECHDC1-207ENST00000430841 COX7A2LO14548 114 aa4.78□□□□□ -1.64
ECHDC1-207ENST00000430841 IGLV7-43P04211 117 aa4.78□□□□□ -1.64
ECHDC1-207ENST00000430841 OCIAD2Q56VL3 154 aa4.78□□□□□ -1.64
ECHDC1-207ENST00000430841 CEND1Q8N111 149 aa4.78□□□□□ -1.64
ECHDC1-207ENST00000430841 TMEM141Q96I45 108 aa4.78□□□□□ -1.64
ECHDC1-207ENST00000430841 TRBV6-5A0A0K0K1A5 114 aa4.77□□□□□ -1.65
ECHDC1-207ENST00000430841 LINC00959A0A1B0GUT2 108 aa4.77□□□□□ -1.65
ECHDC1-207ENST00000430841 A0A1W2PPM0 123 aa4.77□□□□□ -1.65
ECHDC1-207ENST00000430841 SMKR1H3BMG3 65 aa4.77□□□□□ -1.65
ECHDC1-207ENST00000430841 J3QR89 54 aa4.77□□□□□ -1.65
ECHDC1-207ENST00000430841 NMUP48645 174 aa4.77□□□□□ -1.65
ECHDC1-207ENST00000430841 HERVK_113P61574 105 aa4.77□□□□□ -1.65
ECHDC1-207ENST00000430841 ZC2HC1BQ5TFG8 222 aa4.77□□□□□ -1.65
ECHDC1-207ENST00000430841 PHF5AQ7RTV0 110 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-207ENST00000430841 E9PLD3 99 aa4.76□□□□□ -1.65
ECHDC1-207ENST00000430841 F8W1H4 67 aa4.76□□□□□ -1.65
ECHDC1-207ENST00000430841 LYRM7Q5U5X0 104 aa4.76□□□□□ -1.65
ECHDC1-207ENST00000430841 SCGB3A1Q96QR1 104 aa4.76□□□□□ -1.65
ECHDC1-207ENST00000430841 TIMM17AQ99595 171 aa4.76□□□□□ -1.65
ECHDC1-207ENST00000430841 KIR2DL4Q99706 377 aa4.76□□□□□ -1.65
ECHDC1-207ENST00000430841 CYSLTR1Q9Y271 337 aa4.76□□□□□ -1.65
ECHDC1-207ENST00000430841 CHTOPQ9Y3Y2 248 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-207ENST00000430841 LPAP08519 4548 aa4.76□□□□□ -1.65
ECHDC1-207ENST00000430841 MYMXA0A1B0GTQ4 84 aa4.75□□□□□ -1.65
ECHDC1-207ENST00000430841 A0A1B0GWB2 263 aa4.75□□□□□ -1.65
ECHDC1-207ENST00000430841 A0A1W2PNN7 141 aa4.75□□□□□ -1.65
ECHDC1-207ENST00000430841 SDHAF1A6NFY7 115 aa4.75□□□□□ -1.65
ECHDC1-207ENST00000430841 H3BUT2 72 aa4.75□□□□□ -1.65
ECHDC1-207ENST00000430841 I3L3M4 83 aa4.75□□□□□ -1.65
ECHDC1-207ENST00000430841 TSPAN13O95857 204 aa4.75□□□□□ -1.65
ECHDC1-207ENST00000430841 SPAG11BQ08648 103 aa4.75□□□□□ -1.65
ECHDC1-207ENST00000430841 FAM19A5Q7Z5A7 132 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-207ENST00000430841 PCP2Q8IVA1 136 aa4.75□□□□□ -1.65
ECHDC1-207ENST00000430841 MRPL35Q9NZE8 188 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-207ENST00000430841 SPCS1Q9Y6A9 102 aa4.75□□□□□ -1.65
ECHDC1-207ENST00000430841 TRBV27A0A0K0K1C4 114 aa4.74□□□□□ -1.65
ECHDC1-207ENST00000430841 POLR2KP53803 58 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-207ENST00000430841 PMVKQ15126 192 aa4.74□□□□□ -1.65
ECHDC1-207ENST00000430841 C2orf66Q6UXQ4 117 aa4.74□□□□□ -1.65
ECHDC1-207ENST00000430841 C2orf48Q96LS8 159 aa4.74□□□□□ -1.65
ECHDC1-207ENST00000430841 FAT4Q6V0I7 4981 aa4.74□□□□□ -1.65
ECHDC1-207ENST00000430841 MUC2Q02817 5179 aa4.73□□□□□ -1.65
ECHDC1-207ENST00000430841 M0QXV9 152 aa4.73□□□□□ -1.65
ECHDC1-207ENST00000430841 NDUFA1O15239 70 aa4.73□□□□□ -1.65
ECHDC1-207ENST00000430841 KRTAP10-7P60409 375 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-207ENST00000430841 RPL39LQ96EH5 51 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-207ENST00000430841 OPRPNQ99935 248 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-207ENST00000430841 VPS25Q9BRG1 176 aa4.73□□□□□ -1.65
ECHDC1-207ENST00000430841 VCX2Q9H322 139 aa4.73□□□□□ -1.65
ECHDC1-207ENST00000430841 SPANXB1Q9NS25 103 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-207ENST00000430841 TP73-AS1Q9UF72 201 aa4.73□□□□□ -1.65
ECHDC1-207ENST00000430841 IGKV2D-26A0A0A0MRZ7 120 aa4.72□□□□□ -1.65
ECHDC1-207ENST00000430841 TRAV13-1A0A0B4J241 112 aa4.72□□□□□ -1.65
ECHDC1-207ENST00000430841 C11orf86A6NJI1 115 aa4.72□□□□□ -1.65
ECHDC1-207ENST00000430841 SCGB1A1P11684 91 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms