RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 IGHV3-30-5P0DP03 117 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 DEFA4P12838 97 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 CCL3L1P16619 93 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 EIF4EBP1Q13541 118 aaPredicted RBP2.58□□□□□ -2
HMGB3-203ENST00000430118 RNASE13Q5GAN3 156 aaKnown RBP2.58□□□□□ -2
HMGB3-203ENST00000430118 Q5W150 140 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 MIC13Q5XKP0 118 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 DAZ4Q86SG3 579 aaKnown RBP2.58□□□□□ -2
HMGB3-203ENST00000430118 KTN1-AS1Q86SY8 53 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 DYNAPQ8N1N2 210 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 TMEM263Q8WUH6 116 aaKnown RBP2.58□□□□□ -2
HMGB3-203ENST00000430118 NABP2Q9BQ15 211 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 TTTY13Q9BZ97 58 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 FGF23Q9GZV9 251 aaPredicted RBP2.58□□□□□ -2
HMGB3-203ENST00000430118 C8orf17Q9NRJ1 99 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 CELA1Q9UNI1 258 aa2.58□□□□□ -2
HMGB3-203ENST00000430118 IGKV1D-17A0A075B6S4 117 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 IGKV1-6A0A0C4DH72 117 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 A0A0J9YX75 114 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 TRBV10-3A0A0K0K1G6 114 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 ZNF815PA8K554 130 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 IBA57-AS1B1ANH7 110 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 D6R8Y8 96 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 LST1O00453 97 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 LGALS3P17931 250 aaKnown RBP2.57□□□□□ -2
HMGB3-203ENST00000430118 CLEC19AQ6UXS0 136 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 MIR17HGQ75NE6 70 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 C5orf56Q8N8D9 126 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 SLC25A29Q8N8R3 303 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 SMCR5Q8TEV8 140 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 DCANP1Q8TF63 244 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 SLC50A1Q9BRV3 221 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 TIMM21Q9BVV7 248 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 HSPG2P98160 4391 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 DNAH6Q9C0G6 4158 aa2.57□□□□□ -2
HMGB3-203ENST00000430118 TRAV13-2A0A0B4J235 113 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 TRAV41A0A0B4J266 112 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 COX7A2P2O60397 106 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 TIMM17BO60830 172 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 CCKP06307 115 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 DNAH10OSP0CZ25 163 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 ZNF22P17026 224 aaPredicted RBP2.56□□□□□ -2
HMGB3-203ENST00000430118 CD24P25063 80 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 ZNF137PP52743 207 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 SNRPD3P62318 126 aaKnown RBP2.56□□□□□ -2
HMGB3-203ENST00000430118 S100A7L2Q5SY68 101 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 SCGB1D4Q6XE38 83 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 Q86TA4 180 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 TMEM75Q8N9X5 138 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 FAM167A-AS1Q96KT0 104 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 CNFNQ9BYD5 112 aa2.56□□□□□ -2
HMGB3-203ENST00000430118 MRPL35Q9NZE8 188 aaKnown RBP2.56□□□□□ -2
HMGB3-203ENST00000430118 IGLV2-18A0A075B6J9 118 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 IGKV1-12A0A0C4DH73 117 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 TRBV27A0A0K0K1C4 114 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 SDHAF1A6NFY7 115 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 NACAE9PAV3 2078 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 BUB1B-PAK6H3BSN5 160 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 IGKV1D-12P01611 117 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 IGLV1-51P01701 117 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 ARMS2P0C7Q2 107 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 XCL1P47992 114 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 PIGYQ3MUY2 71 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 MRPL51Q4U2R6 128 aaKnown RBP2.55□□□□□ -2
HMGB3-203ENST00000430118 Q8IYB0 196 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 Q8N9L7 120 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 UBALD1Q8TB05 177 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 RBM12B-AS1Q9P1G2 102 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 UBE2D4Q9Y2X8 147 aa2.55□□□□□ -2
HMGB3-203ENST00000430118 TIMM8BQ9Y5J9 83 aaPredicted RBP2.55□□□□□ -2
HMGB3-203ENST00000430118 TRAV7A0A075B6U4 112 aa2.54□□□□□ -2
HMGB3-203ENST00000430118 IGHV3-49A0A0A0MS15 119 aa2.54□□□□□ -2
HMGB3-203ENST00000430118 A0A1B0GVY2 172 aa2.54□□□□□ -2
HMGB3-203ENST00000430118 C11orf86A6NJI1 115 aa2.54□□□□□ -2
HMGB3-203ENST00000430118 TFF1P04155 84 aa2.54□□□□□ -2
HMGB3-203ENST00000430118 PLGLAQ15195 96 aa2.54□□□□□ -2
HMGB3-203ENST00000430118 FXYD5Q96DB9 178 aa2.54□□□□□ -2
HMGB3-203ENST00000430118 ICOSQ9Y6W8 199 aa2.54□□□□□ -2
HMGB3-203ENST00000430118 C16orf90A8MZG2 172 aa2.53□□□□□ -2
HMGB3-203ENST00000430118 ERC2-IT1O76042 136 aa2.53□□□□□ -2
HMGB3-203ENST00000430118 RNASE2P10153 161 aaKnown RBP2.53□□□□□ -2
HMGB3-203ENST00000430118 CKS2P33552 79 aa2.53□□□□□ -2
HMGB3-203ENST00000430118 DAD1P61803 113 aa2.53□□□□□ -2
HMGB3-203ENST00000430118 RHOHQ15669 191 aa2.53□□□□□ -2
HMGB3-203ENST00000430118 Q1T7F1 81 aa2.53□□□□□ -2
HMGB3-203ENST00000430118 ESRGQ1W209 222 aa2.53□□□□□ -2
HMGB3-203ENST00000430118 LYPD5Q6UWN5 251 aa2.53□□□□□ -2
HMGB3-203ENST00000430118 LINC00322Q6ZN03 302 aaPredicted RBP2.53□□□□□ -2
HMGB3-203ENST00000430118 PHF5AQ7RTV0 110 aaKnown RBP2.53□□□□□ -2
HMGB3-203ENST00000430118 DYNLRB2Q8TF09 96 aa2.53□□□□□ -2
HMGB3-203ENST00000430118 PKD1P98161 4303 aa2.53□□□□□ -2
HMGB3-203ENST00000430118 DNAH17Q9UFH2 4485 aa2.52□□□□□ -2.01
HMGB3-203ENST00000430118 LRP1BQ9NZR2 4599 aa2.52□□□□□ -2.01
HMGB3-203ENST00000430118 LOC389332A0A1B0GUA5 103 aa2.52□□□□□ -2.01
HMGB3-203ENST00000430118 FAM223BA6NKX1 122 aa2.52□□□□□ -2.01
HMGB3-203ENST00000430118 UBE2BP63146 152 aa2.52□□□□□ -2.01
HMGB3-203ENST00000430118 RBM3P98179 157 aaKnown RBP2.52□□□□□ -2.01
HMGB3-203ENST00000430118 SFTA2Q6UW10 78 aa2.52□□□□□ -2.01
HMGB3-203ENST00000430118 FAM223AQ8IWN6 122 aa2.52□□□□□ -2.01
HMGB3-203ENST00000430118 LYPD1Q8N2G4 141 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms