RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-205	ENST00000428843	PLA2G2D	Q9UNK4	145 aa		13.9	□□□□□ -0.18
PTPN18-205	ENST00000428843	C22orf24	Q9Y442	160 aa		13.89	□□□□□ -0.19
PTPN18-205	ENST00000428843	MIR7-3HG	Q8N6C7	128 aa		13.88	□□□□□ -0.19
PTPN18-205	ENST00000428843	TTTY13	Q9BZ97	58 aa		13.87	□□□□□ -0.19
PTPN18-205	ENST00000428843		A0A0J9YXY3	114 aa		13.86	□□□□□ -0.19
PTPN18-205	ENST00000428843	SCGB1D1	O95968	90 aa		13.86	□□□□□ -0.19
PTPN18-205	ENST00000428843	IGLV5-37	A0A075B6J1	123 aa		13.85	□□□□□ -0.19
PTPN18-205	ENST00000428843	ZNF815P	A8K554	130 aa		13.85	□□□□□ -0.19
PTPN18-205	ENST00000428843	PRR3	P79522	188 aa	Known RBP	13.85	□□□□□ -0.19
PTPN18-205	ENST00000428843	KRTAP11-1	Q8IUC1	163 aa		13.85	□□□□□ -0.19
PTPN18-205	ENST00000428843	TP73-AS1	Q9UF72	201 aa		13.85	□□□□□ -0.19
PTPN18-205	ENST00000428843	INAFM2	P0DMQ5	153 aa		13.84	□□□□□ -0.19
PTPN18-205	ENST00000428843	VPREB1	P12018	145 aa		13.83	□□□□□ -0.2
PTPN18-205	ENST00000428843	UBE2B	P63146	152 aa		13.83	□□□□□ -0.2
PTPN18-205	ENST00000428843	MRPL55	Q7Z7F7	128 aa	Known RBP	13.83	□□□□□ -0.2
PTPN18-205	ENST00000428843	DAND5	Q8N907	189 aa		13.83	□□□□□ -0.2
PTPN18-205	ENST00000428843	LBH	Q53QV2	105 aa	Predicted RBP	13.82	□□□□□ -0.2
PTPN18-205	ENST00000428843	NKAPP1	Q8N9T2	125 aa		13.82	□□□□□ -0.2
PTPN18-205	ENST00000428843		Q8NDZ9	215 aa		13.82	□□□□□ -0.2
PTPN18-205	ENST00000428843	PSORS1C2	Q9UIG4	136 aa		13.82	□□□□□ -0.2
PTPN18-205	ENST00000428843	ABCA13	Q86UQ4	5058 aa		13.81	□□□□□ -0.2
PTPN18-205	ENST00000428843	RPL24	P83731	157 aa	Known RBP	13.81	□□□□□ -0.2
PTPN18-205	ENST00000428843	HSBP1L1	C9JCN9	74 aa		13.8	□□□□□ -0.2
PTPN18-205	ENST00000428843	HNRNPA3	P51991	378 aa	Known RBP	13.8	□□□□□ -0.2
PTPN18-205	ENST00000428843	ADAMTSL4-AS1	Q5T5F5	129 aa		13.79	□□□□□ -0.2
PTPN18-205	ENST00000428843	LINC00167	Q96N53	147 aa		13.79	□□□□□ -0.2
PTPN18-205	ENST00000428843	GAGE10	A6NGK3	116 aa		13.78	□□□□□ -0.2
PTPN18-205	ENST00000428843	PCP2	Q8IVA1	136 aa		13.78	□□□□□ -0.2
PTPN18-205	ENST00000428843	BOD1L2	Q8IYS8	172 aa		13.78	□□□□□ -0.2
PTPN18-205	ENST00000428843	SRRM2	Q9UQ35	2752 aa	Known RBP	13.78	□□□□□ -0.2
PTPN18-205	ENST00000428843	TIMM17B	O60830	172 aa		13.77	□□□□□ -0.21
PTPN18-205	ENST00000428843	LITAF	Q99732	161 aa		13.77	□□□□□ -0.21
PTPN18-205	ENST00000428843	LOC107984156	A0A0G2JMH3	177 aa		13.76	□□□□□ -0.21
PTPN18-205	ENST00000428843	C1orf137	Q5JT78	98 aa		13.76	□□□□□ -0.21
PTPN18-205	ENST00000428843	ARL17A	Q8IVW1	177 aa		13.76	□□□□□ -0.21
PTPN18-205	ENST00000428843	RPL37AP8	A6NKH3	93 aa		13.75	□□□□□ -0.21
PTPN18-205	ENST00000428843	JOSD1	Q15040	202 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN18-205	ENST00000428843	NPC2	P61916	151 aa		13.73	□□□□□ -0.21
PTPN18-205	ENST00000428843	SCGB1D4	Q6XE38	83 aa		13.73	□□□□□ -0.21
PTPN18-205	ENST00000428843	MIEN1	Q9BRT3	115 aa		13.73	□□□□□ -0.21
PTPN18-205	ENST00000428843	SOSTDC1	Q6X4U4	206 aa		13.72	□□□□□ -0.21
PTPN18-205	ENST00000428843	EIF4EBP3	O60516	100 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN18-205	ENST00000428843	PKHD1L1	Q86WI1	4243 aa		13.71	□□□□□ -0.21
PTPN18-205	ENST00000428843	PCLO	Q9Y6V0	5065 aa		13.7	□□□□□ -0.22
PTPN18-205	ENST00000428843	IGKV2-28	A0A075B6P5	120 aa		13.7	□□□□□ -0.22
PTPN18-205	ENST00000428843		M0R378	163 aa		13.7	□□□□□ -0.22
PTPN18-205	ENST00000428843	NCR3	O14931	201 aa		13.7	□□□□□ -0.22
PTPN18-205	ENST00000428843	IGKV2D-28	P01615	120 aa		13.7	□□□□□ -0.22
PTPN18-205	ENST00000428843	IGLV1-50	A0A075B6I6	118 aa		13.69	□□□□□ -0.22
PTPN18-205	ENST00000428843	IGLV7-43	P04211	117 aa		13.69	□□□□□ -0.22
PTPN18-205	ENST00000428843	LINC00308	Q8TCZ7	52 aa		13.69	□□□□□ -0.22
PTPN18-205	ENST00000428843	TMEM238	C9JI98	176 aa		13.68	□□□□□ -0.22
PTPN18-205	ENST00000428843	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
PTPN18-205	ENST00000428843	SPANXD	Q9BXN6	97 aa		13.67	□□□□□ -0.22
PTPN18-205	ENST00000428843	SPANXC	Q9NY87	97 aa		13.67	□□□□□ -0.22
PTPN18-205	ENST00000428843	FLG2	Q5D862	2391 aa	Predicted RBP	13.66	□□□□□ -0.22
PTPN18-205	ENST00000428843	NDUFC2	O95298	119 aa		13.65	□□□□□ -0.22
PTPN18-205	ENST00000428843	PYY3	Q5JQD4	70 aa		13.65	□□□□□ -0.22
PTPN18-205	ENST00000428843	SPINK6	Q6UWN8	80 aa		13.65	□□□□□ -0.22
PTPN18-205	ENST00000428843	PAM16	Q9Y3D7	125 aa		13.65	□□□□□ -0.22
PTPN18-205	ENST00000428843	VAMP8	Q9BV40	100 aa		13.64	□□□□□ -0.23
PTPN18-205	ENST00000428843	SPANXB1	Q9NS25	103 aa	Predicted RBP	13.64	□□□□□ -0.23
PTPN18-205	ENST00000428843	BCE1	O60756	84 aa		13.63	□□□□□ -0.23
PTPN18-205	ENST00000428843	SPATA45	Q537H7	98 aa		13.63	□□□□□ -0.23
PTPN18-205	ENST00000428843	TRBV10-2	A0A0K0K1G8	114 aa		13.62	□□□□□ -0.23
PTPN18-205	ENST00000428843	COX8A	P10176	69 aa		13.62	□□□□□ -0.23
PTPN18-205	ENST00000428843	REG3G	Q6UW15	175 aa		13.6	□□□□□ -0.23
PTPN18-205	ENST00000428843		Q6ZVH6	145 aa		13.6	□□□□□ -0.23
PTPN18-205	ENST00000428843	TMEM126A	Q9H061	195 aa		13.6	□□□□□ -0.23
PTPN18-205	ENST00000428843	TRBV10-3	A0A0K0K1G6	114 aa		13.59	□□□□□ -0.23
PTPN18-205	ENST00000428843	IFITM1	P13164	125 aa		13.59	□□□□□ -0.23
PTPN18-205	ENST00000428843	C14orf144	Q96I85	54 aa		13.58	□□□□□ -0.24
PTPN18-205	ENST00000428843	ZNF861P	O60384	105 aa		13.57	□□□□□ -0.24
PTPN18-205	ENST00000428843	DDT	P30046	118 aa		13.57	□□□□□ -0.24
PTPN18-205	ENST00000428843	MUSTN1	Q8IVN3	82 aa		13.57	□□□□□ -0.24
PTPN18-205	ENST00000428843	COPS9	Q8WXC6	57 aa		13.57	□□□□□ -0.24
PTPN18-205	ENST00000428843	PRY	O14603	147 aa		13.56	□□□□□ -0.24
PTPN18-205	ENST00000428843	DLEU1	O43261	78 aa		13.56	□□□□□ -0.24
PTPN18-205	ENST00000428843	DIRC1	Q969H9	104 aa		13.56	□□□□□ -0.24
PTPN18-205	ENST00000428843	PPDPF	Q9H3Y8	114 aa		13.56	□□□□□ -0.24
PTPN18-205	ENST00000428843	KCNQ1DN	Q9H478	68 aa		13.56	□□□□□ -0.24
PTPN18-205	ENST00000428843	S100A7L2	Q5SY68	101 aa		13.55	□□□□□ -0.24
PTPN18-205	ENST00000428843	MYCBP2	O75592	4640 aa		13.54	□□□□□ -0.24
PTPN18-205	ENST00000428843	IGLV6-57	P01721	117 aa		13.54	□□□□□ -0.24
PTPN18-205	ENST00000428843	RPL28	P46779	137 aa	Known RBP	13.54	□□□□□ -0.24
PTPN18-205	ENST00000428843	UBE2A	P49459	152 aa		13.54	□□□□□ -0.24
PTPN18-205	ENST00000428843	FAM19A1	Q7Z5A9	133 aa		13.54	□□□□□ -0.24
PTPN18-205	ENST00000428843	KRTAP29-1	A8MX34	341 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN18-205	ENST00000428843		H0Y9J4	135 aa		13.53	□□□□□ -0.24
PTPN18-205	ENST00000428843	KRTAP13-1	Q8IUC0	172 aa		13.53	□□□□□ -0.24
PTPN18-205	ENST00000428843	OXT	P01178	125 aa		13.52	□□□□□ -0.25
PTPN18-205	ENST00000428843	SPRR1A	P35321	89 aa		13.51	□□□□□ -0.25
PTPN18-205	ENST00000428843	S100A12	P80511	92 aa		13.51	□□□□□ -0.25
PTPN18-205	ENST00000428843	SLC25A34	Q6PIV7	304 aa		13.51	□□□□□ -0.25
PTPN18-205	ENST00000428843	PRLH	P81277	87 aa		13.5	□□□□□ -0.25
PTPN18-205	ENST00000428843	LINC00518	Q8N0U6	118 aa		13.5	□□□□□ -0.25
PTPN18-205	ENST00000428843	OR13C6P	Q8NH95	151 aa		13.49	□□□□□ -0.25
PTPN18-205	ENST00000428843	LRP1	Q07954	4544 aa	Known RBP	13.49	□□□□□ -0.25
PTPN18-205	ENST00000428843	FAT3	Q8TDW7	4589 aa		13.48	□□□□□ -0.25
PTPN18-205	ENST00000428843	LINC00337	Q8N6G1	96 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms