RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 Q6ZSN1 163 aa6.26□□□□□ -1.41
CTNND1-208ENST00000428599 KIF25-AS1Q9Y6Z4 181 aa6.25□□□□□ -1.41
CTNND1-208ENST00000428599 TSPEAR-AS2P59090 65 aa6.25□□□□□ -1.41
CTNND1-208ENST00000428599 Q6ZRP5 223 aa6.25□□□□□ -1.41
CTNND1-208ENST00000428599 YPEL4Q96NS1 127 aa6.25□□□□□ -1.41
CTNND1-208ENST00000428599 ATP11AUNQ6ZP68 121 aa6.25□□□□□ -1.41
CTNND1-208ENST00000428599 RTL8CO15255 209 aa6.24□□□□□ -1.41
CTNND1-208ENST00000428599 CXCL6P80162 114 aa6.24□□□□□ -1.41
CTNND1-208ENST00000428599 KIAA0087Q14695 138 aa6.24□□□□□ -1.41
CTNND1-208ENST00000428599 A8MTW9 85 aa6.23□□□□□ -1.41
CTNND1-208ENST00000428599 Q8NBF4 154 aa6.23□□□□□ -1.41
CTNND1-208ENST00000428599 SETD2Q9BYW2 2564 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-208ENST00000428599 COX6B2Q6YFQ2 88 aa6.23□□□□□ -1.41
CTNND1-208ENST00000428599 PCSK5Q92824 1860 aa6.23□□□□□ -1.41
CTNND1-208ENST00000428599 TET2Q6N021 2002 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-208ENST00000428599 LINC00313P59037 77 aa6.23□□□□□ -1.41
CTNND1-208ENST00000428599 LINC00167Q96N53 147 aa6.23□□□□□ -1.41
CTNND1-208ENST00000428599 C6orf48Q9UBA6 75 aa6.22□□□□□ -1.41
CTNND1-208ENST00000428599 PKD1L2Q7Z442 2459 aa6.21□□□□□ -1.41
CTNND1-208ENST00000428599 SMIM29Q86T20 159 aa6.21□□□□□ -1.42
CTNND1-208ENST00000428599 WWC2-AS2Q96NR7 200 aa6.21□□□□□ -1.42
CTNND1-208ENST00000428599 H3BNG1 76 aa6.21□□□□□ -1.42
CTNND1-208ENST00000428599 SPAG11AQ6PDA7 123 aa6.21□□□□□ -1.42
CTNND1-208ENST00000428599 SPINT4Q6UDR6 99 aa6.21□□□□□ -1.42
CTNND1-208ENST00000428599 DOPEY1Q5JWR5 2465 aa6.2□□□□□ -1.42
CTNND1-208ENST00000428599 NBDYA0A0U1RRE5 68 aa6.2□□□□□ -1.42
CTNND1-208ENST00000428599 COX8CQ7Z4L0 72 aa6.2□□□□□ -1.42
CTNND1-208ENST00000428599 LINC00315P59091 139 aa6.2□□□□□ -1.42
CTNND1-208ENST00000428599 Q9UF83 564 aa6.19□□□□□ -1.42
CTNND1-208ENST00000428599 ANKRD17O75179 2603 aaKnown RBP6.19□□□□□ -1.42
CTNND1-208ENST00000428599 A0A1B0GW54 56 aa6.18□□□□□ -1.42
CTNND1-208ENST00000428599 PHF5AQ7RTV0 110 aaKnown RBP6.18□□□□□ -1.42
CTNND1-208ENST00000428599 Q96NJ1 140 aa6.18□□□□□ -1.42
CTNND1-208ENST00000428599 COL27A1Q8IZC6 1860 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-208ENST00000428599 POLQO75417 2590 aa6.18□□□□□ -1.42
CTNND1-208ENST00000428599 RPL37AP61513 92 aaKnown RBP6.18□□□□□ -1.42
CTNND1-208ENST00000428599 LINC00846Q9NV44 126 aa6.18□□□□□ -1.42
CTNND1-208ENST00000428599 MTORP42345 2549 aa6.18□□□□□ -1.42
CTNND1-208ENST00000428599 KRTAP24-1Q3LI83 254 aa6.18□□□□□ -1.42
CTNND1-208ENST00000428599 CEP350Q5VT06 3117 aa6.18□□□□□ -1.42
CTNND1-208ENST00000428599 AGRNO00468 2067 aa6.18□□□□□ -1.42
CTNND1-208ENST00000428599 SPATA3Q8NHX4 192 aa6.18□□□□□ -1.42
CTNND1-208ENST00000428599 EPG5Q9HCE0 2579 aa6.17□□□□□ -1.42
CTNND1-208ENST00000428599 C11orf72Q8NBR9 251 aa6.16□□□□□ -1.42
CTNND1-208ENST00000428599 URB1-AS1Q96HZ7 61 aa6.16□□□□□ -1.42
CTNND1-208ENST00000428599 H3BPC8 53 aa6.16□□□□□ -1.42
CTNND1-208ENST00000428599 CHTF8P0CG12 524 aa6.16□□□□□ -1.42
CTNND1-208ENST00000428599 EPM2AB3EWF7 344 aa6.16□□□□□ -1.42
CTNND1-208ENST00000428599 TRAV22A0A0B4J277 110 aa6.15□□□□□ -1.43
CTNND1-208ENST00000428599 IGLV5-39A0A0G2JS06 123 aa6.14□□□□□ -1.43
CTNND1-208ENST00000428599 ELOF1P60002 83 aaKnown RBP6.14□□□□□ -1.43
CTNND1-208ENST00000428599 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
CTNND1-208ENST00000428599 ACANP16112 2415 aa6.14□□□□□ -1.43
CTNND1-208ENST00000428599 LINC00476Q8WZB0 136 aa6.14□□□□□ -1.43
CTNND1-208ENST00000428599 BCE1O60756 84 aa6.13□□□□□ -1.43
CTNND1-208ENST00000428599 Q6ZRX8 168 aa6.13□□□□□ -1.43
CTNND1-208ENST00000428599 IGHV3OR16-9A0A0B4J2B5 98 aa6.13□□□□□ -1.43
CTNND1-208ENST00000428599 C8orf87E5RJ46 101 aa6.13□□□□□ -1.43
CTNND1-208ENST00000428599 LINC00310P59036 64 aa6.12□□□□□ -1.43
CTNND1-208ENST00000428599 LINC00588Q9Y4M8 146 aa6.11□□□□□ -1.43
CTNND1-208ENST00000428599 LOC101927531A0A1B0GV80 90 aa6.1□□□□□ -1.43
CTNND1-208ENST00000428599 IGLV8-61A0A075B6I0 122 aa6.1□□□□□ -1.43
CTNND1-208ENST00000428599 CDIP1Q9H305 208 aa6.09□□□□□ -1.43
CTNND1-208ENST00000428599 ST20-AS1Q8NBB2 130 aa6.09□□□□□ -1.43
CTNND1-208ENST00000428599 A0A096LNJ9 63 aa6.09□□□□□ -1.44
CTNND1-208ENST00000428599 GVQW2A0A096LPI5 108 aaPredicted RBP6.08□□□□□ -1.44
CTNND1-208ENST00000428599 FAM19A4Q96LR4 140 aa6.07□□□□□ -1.44
CTNND1-208ENST00000428599 F8P00451 2351 aa6.07□□□□□ -1.44
CTNND1-208ENST00000428599 LOC110117498A0A087WWA1 95 aa6.06□□□□□ -1.44
CTNND1-208ENST00000428599 LINC00304Q8N9R0 145 aa6.06□□□□□ -1.44
CTNND1-208ENST00000428599 APLNQ9ULZ1 77 aa6.06□□□□□ -1.44
CTNND1-208ENST00000428599 SSBP3-AS1Q7Z2R9 100 aa6.05□□□□□ -1.44
CTNND1-208ENST00000428599 Q6ZQT0 140 aa6.05□□□□□ -1.44
CTNND1-208ENST00000428599 Q8NAQ8 132 aa6.05□□□□□ -1.44
CTNND1-208ENST00000428599 MRPL34Q9BQ48 92 aaKnown RBP6.05□□□□□ -1.44
CTNND1-208ENST00000428599 CHD7Q9P2D1 2997 aa6.05□□□□□ -1.44
CTNND1-208ENST00000428599 IGLV5-45A0A087WSX0 123 aa6.05□□□□□ -1.44
CTNND1-208ENST00000428599 CRIPTQ9P021 101 aa6.05□□□□□ -1.44
CTNND1-208ENST00000428599 LINC01546A6NGU7 62 aa6.04□□□□□ -1.44
CTNND1-208ENST00000428599 A8MWP4 228 aa6.04□□□□□ -1.44
CTNND1-208ENST00000428599 C5orf42Q9H799 3197 aa6.04□□□□□ -1.44
CTNND1-208ENST00000428599 TRBV7-4A0A0J9YYF1 115 aa6.04□□□□□ -1.44
CTNND1-208ENST00000428599 DNAH10OSP0CZ25 163 aa6.04□□□□□ -1.44
CTNND1-208ENST00000428599 LINC01600Q96MT4 127 aa6.04□□□□□ -1.44
CTNND1-208ENST00000428599 RBM12B-AS1Q9P1G2 102 aa6.03□□□□□ -1.44
CTNND1-208ENST00000428599 PRRC2CQ9Y520 2896 aaKnown RBP6.02□□□□□ -1.45
CTNND1-208ENST00000428599 C4orf26Q17RF5 130 aa6.02□□□□□ -1.45
CTNND1-208ENST00000428599 A0A096LNT2 108 aa6.02□□□□□ -1.45
CTNND1-208ENST00000428599 PCNTO95613 3336 aa6.01□□□□□ -1.45
CTNND1-208ENST00000428599 FLNBO75369 2602 aaKnown RBP6.01□□□□□ -1.45
CTNND1-208ENST00000428599 IGLV5-37A0A075B6J1 123 aa6□□□□□ -1.45
CTNND1-208ENST00000428599 C9orf92A6NGG3 77 aa6□□□□□ -1.45
CTNND1-208ENST00000428599 HECTD1Q9ULT8 2610 aa6□□□□□ -1.45
CTNND1-208ENST00000428599 FAM218AQ96MZ4 157 aa6□□□□□ -1.45
CTNND1-208ENST00000428599 MUC4Q99102 2169 aa6□□□□□ -1.45
CTNND1-208ENST00000428599 DSCR10P59022 87 aa5.99□□□□□ -1.45
CTNND1-208ENST00000428599 KLK9Q2XQG4 91 aa5.99□□□□□ -1.45
CTNND1-208ENST00000428599 UQCR11O14957 56 aa5.99□□□□□ -1.45
CTNND1-208ENST00000428599 HTTP42858 3142 aa5.99□□□□□ -1.45
CTNND1-208ENST00000428599 LINC00336Q6ZUF6 198 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms