RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 TP73-AS1Q9UF72 201 aa5.4□□□□□ -1.54
SMARCAL1-206ENST00000427645 LECT2O14960 151 aa5.39□□□□□ -1.55
SMARCAL1-206ENST00000427645 SMIM13P0DJ93 91 aa5.39□□□□□ -1.55
SMARCAL1-206ENST00000427645 PFN2P35080 140 aa5.39□□□□□ -1.55
SMARCAL1-206ENST00000427645 CNBPP62633 177 aaKnown RBP5.39□□□□□ -1.55
SMARCAL1-206ENST00000427645 RPL24P83731 157 aaKnown RBP5.39□□□□□ -1.55
SMARCAL1-206ENST00000427645 C10orf25Q5T742 122 aa5.39□□□□□ -1.55
SMARCAL1-206ENST00000427645 CEND1Q8N111 149 aa5.39□□□□□ -1.55
SMARCAL1-206ENST00000427645 CARD19Q96LW7 228 aa5.39□□□□□ -1.55
SMARCAL1-206ENST00000427645 PKIGQ9Y2B9 76 aa5.39□□□□□ -1.55
SMARCAL1-206ENST00000427645 FAT1Q14517 4588 aa5.38□□□□□ -1.55
SMARCAL1-206ENST00000427645 A0A087WTM6 91 aa5.38□□□□□ -1.55
SMARCAL1-206ENST00000427645 TLX1NBP0CAT3 122 aa5.38□□□□□ -1.55
SMARCAL1-206ENST00000427645 ADAMTSL4-AS1Q5T5F5 129 aa5.38□□□□□ -1.55
SMARCAL1-206ENST00000427645 Q6ZRU5 148 aa5.38□□□□□ -1.55
SMARCAL1-206ENST00000427645 Q8N814 137 aa5.38□□□□□ -1.55
SMARCAL1-206ENST00000427645 LITAFQ99732 161 aa5.38□□□□□ -1.55
SMARCAL1-206ENST00000427645 C6orf48Q9UBA6 75 aa5.38□□□□□ -1.55
SMARCAL1-206ENST00000427645 LOC107984156A0A0G2JMH3 177 aa5.37□□□□□ -1.55
SMARCAL1-206ENST00000427645 A0A0U1RRA0 63 aa5.37□□□□□ -1.55
SMARCAL1-206ENST00000427645 NDUFC2-KCTD14E9PQ53 114 aa5.37□□□□□ -1.55
SMARCAL1-206ENST00000427645 CDK2AP2O75956 126 aa5.37□□□□□ -1.55
SMARCAL1-206ENST00000427645 SLPIP03973 132 aa5.37□□□□□ -1.55
SMARCAL1-206ENST00000427645 MUSTN1Q8IVN3 82 aa5.37□□□□□ -1.55
SMARCAL1-206ENST00000427645 ARL17AQ8IVW1 177 aa5.37□□□□□ -1.55
SMARCAL1-206ENST00000427645 MIR7-3HGQ8N6C7 128 aa5.37□□□□□ -1.55
SMARCAL1-206ENST00000427645 FUSP35637 526 aaKnown RBP eCLIP5.36□□□□□ -1.55
SMARCAL1-206ENST00000427645 WFDC2Q14508 124 aa5.36□□□□□ -1.55
SMARCAL1-206ENST00000427645 C9orf116Q5BN46 136 aaPredicted RBP5.36□□□□□ -1.55
SMARCAL1-206ENST00000427645 LINC00308Q8TCZ7 52 aa5.36□□□□□ -1.55
SMARCAL1-206ENST00000427645 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.35□□□□□ -1.55
SMARCAL1-206ENST00000427645 LOC107984640A0A0U1RRK4 108 aa5.35□□□□□ -1.55
SMARCAL1-206ENST00000427645 A6NDN8 102 aa5.35□□□□□ -1.55
SMARCAL1-206ENST00000427645 HINT1P49773 126 aaPredicted RBP5.35□□□□□ -1.55
SMARCAL1-206ENST00000427645 KRTAP10-2P60368 255 aa5.35□□□□□ -1.55
SMARCAL1-206ENST00000427645 BVES-AS1Q5T3Y7 98 aa5.35□□□□□ -1.55
SMARCAL1-206ENST00000427645 Q8N1X5 172 aa5.35□□□□□ -1.55
SMARCAL1-206ENST00000427645 C9orf163Q8N9P6 203 aa5.35□□□□□ -1.55
SMARCAL1-206ENST00000427645 NDUFC2O95298 119 aa5.34□□□□□ -1.55
SMARCAL1-206ENST00000427645 DAND5Q8N907 189 aa5.34□□□□□ -1.55
SMARCAL1-206ENST00000427645 SND1-IT1Q9HBX3 110 aa5.34□□□□□ -1.55
SMARCAL1-206ENST00000427645 A4D1N5 150 aa5.33□□□□□ -1.56
SMARCAL1-206ENST00000427645 NPC2P61916 151 aa5.33□□□□□ -1.56
SMARCAL1-206ENST00000427645 LBHQ53QV2 105 aaPredicted RBP5.33□□□□□ -1.56
SMARCAL1-206ENST00000427645 LINC00474Q9P2X8 69 aa5.33□□□□□ -1.56
SMARCAL1-206ENST00000427645 FXYD2P54710 66 aa5.32□□□□□ -1.56
SMARCAL1-206ENST00000427645 RPL18AQ02543 176 aaKnown RBP5.32□□□□□ -1.56
SMARCAL1-206ENST00000427645 BATFQ16520 125 aa5.32□□□□□ -1.56
SMARCAL1-206ENST00000427645 GAGE2EQ4V326 116 aa5.32□□□□□ -1.56
SMARCAL1-206ENST00000427645 Q6ZRP5 223 aa5.32□□□□□ -1.56
SMARCAL1-206ENST00000427645 SNHG12Q9BXW3 62 aa5.32□□□□□ -1.56
SMARCAL1-206ENST00000427645 GAGE2DQ9UEU5 116 aa5.32□□□□□ -1.56
SMARCAL1-206ENST00000427645 PLA2G2DQ9UNK4 145 aa5.32□□□□□ -1.56
SMARCAL1-206ENST00000427645 IGLV5-52A0A0A0MRZ9 124 aa5.31□□□□□ -1.56
SMARCAL1-206ENST00000427645 TRAV13-2A0A0B4J235 113 aa5.31□□□□□ -1.56
SMARCAL1-206ENST00000427645 A0A0B4J2C4 111 aa5.31□□□□□ -1.56
SMARCAL1-206ENST00000427645 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
SMARCAL1-206ENST00000427645 COL5A1-AS1Q5SY13 56 aa5.31□□□□□ -1.56
SMARCAL1-206ENST00000427645 SOSTDC1Q6X4U4 206 aa5.31□□□□□ -1.56
SMARCAL1-206ENST00000427645 RAB37Q96AX2 223 aa5.31□□□□□ -1.56
SMARCAL1-206ENST00000427645 NHP2Q9NX24 153 aaKnown RBP5.31□□□□□ -1.56
SMARCAL1-206ENST00000427645 TRBV10-2A0A0K0K1G8 114 aa5.3□□□□□ -1.56
SMARCAL1-206ENST00000427645 A0A1B0GWB2 263 aa5.3□□□□□ -1.56
SMARCAL1-206ENST00000427645 CFC1BP0CG36 223 aa5.3□□□□□ -1.56
SMARCAL1-206ENST00000427645 CFC1P0CG37 223 aa5.3□□□□□ -1.56
SMARCAL1-206ENST00000427645 SDIM1Q6ZPB5 146 aa5.3□□□□□ -1.56
SMARCAL1-206ENST00000427645 XAGE1AQ9HD64 81 aa5.3□□□□□ -1.56
SMARCAL1-206ENST00000427645 PRO1854Q9UHT4 67 aa5.3□□□□□ -1.56
SMARCAL1-206ENST00000427645 EPM2AB3EWF7 344 aa5.29□□□□□ -1.56
SMARCAL1-206ENST00000427645 CBY1Q9Y3M2 126 aa5.29□□□□□ -1.56
SMARCAL1-206ENST00000427645 C9orf129Q5T035 196 aaKnown RBP5.28□□□□□ -1.56
SMARCAL1-206ENST00000427645 DPH3Q96FX2 82 aa5.28□□□□□ -1.56
SMARCAL1-206ENST00000427645 TMEM126AQ9H061 195 aa5.28□□□□□ -1.56
SMARCAL1-206ENST00000427645 MYCBP2O75592 4640 aa5.27□□□□□ -1.57
SMARCAL1-206ENST00000427645 A0A096LNI7 61 aa5.27□□□□□ -1.57
SMARCAL1-206ENST00000427645 M0R378 163 aa5.27□□□□□ -1.57
SMARCAL1-206ENST00000427645 INAFM2P0DMQ5 153 aa5.27□□□□□ -1.57
SMARCAL1-206ENST00000427645 XGP55808 180 aa5.27□□□□□ -1.57
SMARCAL1-206ENST00000427645 S100A7L2Q5SY68 101 aa5.27□□□□□ -1.57
SMARCAL1-206ENST00000427645 NKAPP1Q8N9T2 125 aa5.27□□□□□ -1.57
SMARCAL1-206ENST00000427645 OR13C6PQ8NH95 151 aa5.27□□□□□ -1.57
SMARCAL1-206ENST00000427645 IGLV5-37A0A075B6J1 123 aa5.26□□□□□ -1.57
SMARCAL1-206ENST00000427645 IGKV2-28A0A075B6P5 120 aa5.26□□□□□ -1.57
SMARCAL1-206ENST00000427645 IGKV2-24A0A0C4DH68 120 aa5.26□□□□□ -1.57
SMARCAL1-206ENST00000427645 IGKV2D-28P01615 120 aa5.26□□□□□ -1.57
SMARCAL1-206ENST00000427645 SMR3BP02814 79 aaPredicted RBP5.26□□□□□ -1.57
SMARCAL1-206ENST00000427645 VPREB1P12018 145 aa5.26□□□□□ -1.57
SMARCAL1-206ENST00000427645 HAMPP81172 84 aa5.26□□□□□ -1.57
SMARCAL1-206ENST00000427645 C9orf118A6NHY6 69 aa5.25□□□□□ -1.57
SMARCAL1-206ENST00000427645 KRTAP10-1P60331 282 aa5.25□□□□□ -1.57
SMARCAL1-206ENST00000427645 PRR3P79522 188 aaKnown RBP5.25□□□□□ -1.57
SMARCAL1-206ENST00000427645 Q1RN00 199 aa5.25□□□□□ -1.57
SMARCAL1-206ENST00000427645 Q5VSD8 79 aa5.25□□□□□ -1.57
SMARCAL1-206ENST00000427645 C22orf24Q9Y442 160 aa5.25□□□□□ -1.57
SMARCAL1-206ENST00000427645 TAX1BP3O14907 124 aa5.24□□□□□ -1.57
SMARCAL1-206ENST00000427645 NCR3O14931 201 aa5.24□□□□□ -1.57
SMARCAL1-206ENST00000427645 COX6CP09669 75 aa5.24□□□□□ -1.57
SMARCAL1-206ENST00000427645 RPL13AP40429 203 aaKnown RBP5.24□□□□□ -1.57
SMARCAL1-206ENST00000427645 LINC01620Q4KN68 170 aa5.24□□□□□ -1.57
SMARCAL1-206ENST00000427645 LINC00337Q8N6G1 96 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 188 ms