RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 C15orf53Q8NAA6 179 aa9.35□□□□□ -0.91
APOBEC3D-202ENST00000427494 C1orf43Q9BWL3 253 aa9.35□□□□□ -0.91
APOBEC3D-202ENST00000427494 NOTCH1P46531 2555 aa9.35□□□□□ -0.91
APOBEC3D-202ENST00000427494 DNAL4O96015 105 aa9.35□□□□□ -0.91
APOBEC3D-202ENST00000427494 CAMK2N2Q96S95 79 aa9.34□□□□□ -0.91
APOBEC3D-202ENST00000427494 TMEM126AQ9H061 195 aa9.34□□□□□ -0.91
APOBEC3D-202ENST00000427494 IGKV2D-24A0A075B6R9 120 aa9.33□□□□□ -0.92
APOBEC3D-202ENST00000427494 LECT2O14960 151 aa9.33□□□□□ -0.92
APOBEC3D-202ENST00000427494 DNAH10OSP0CZ25 163 aa9.33□□□□□ -0.92
APOBEC3D-202ENST00000427494 XGP55808 180 aa9.33□□□□□ -0.92
APOBEC3D-202ENST00000427494 C15orf56Q8N910 161 aa9.33□□□□□ -0.92
APOBEC3D-202ENST00000427494 S100A7L2Q5SY68 101 aa9.32□□□□□ -0.92
APOBEC3D-202ENST00000427494 MT-ATP8P03928 68 aa9.32□□□□□ -0.92
APOBEC3D-202ENST00000427494 C22orf24Q9Y442 160 aa9.32□□□□□ -0.92
APOBEC3D-202ENST00000427494 LINC00588Q9Y4M8 146 aa9.32□□□□□ -0.92
APOBEC3D-202ENST00000427494 Q6ZRU5 148 aa9.3□□□□□ -0.92
APOBEC3D-202ENST00000427494 XAGE1AQ9HD64 81 aa9.3□□□□□ -0.92
APOBEC3D-202ENST00000427494 SCGB1A1P11684 91 aa9.29□□□□□ -0.92
APOBEC3D-202ENST00000427494 RPL18AQ02543 176 aaKnown RBP9.29□□□□□ -0.92
APOBEC3D-202ENST00000427494 C2orf48Q96LS8 159 aa9.29□□□□□ -0.92
APOBEC3D-202ENST00000427494 NBEAL1Q6ZS30 2694 aa9.28□□□□□ -0.92
APOBEC3D-202ENST00000427494 SLPIP03973 132 aa9.28□□□□□ -0.92
APOBEC3D-202ENST00000427494 MDFIQ99750 246 aa9.28□□□□□ -0.92
APOBEC3D-202ENST00000427494 C6orf99Q4VX62 202 aa9.27□□□□□ -0.93
APOBEC3D-202ENST00000427494 FAM240AA0A1B0GVK7 77 aa9.26□□□□□ -0.93
APOBEC3D-202ENST00000427494 A0A1B0GX51 115 aa9.26□□□□□ -0.93
APOBEC3D-202ENST00000427494 IGLV6-57P01721 117 aa9.26□□□□□ -0.93
APOBEC3D-202ENST00000427494 Q8N814 137 aa9.25□□□□□ -0.93
APOBEC3D-202ENST00000427494 ORMDL1Q9P0S3 153 aa9.25□□□□□ -0.93
APOBEC3D-202ENST00000427494 F8WDY8 70 aa9.24□□□□□ -0.93
APOBEC3D-202ENST00000427494 INAFM2P0DMQ5 153 aa9.24□□□□□ -0.93
APOBEC3D-202ENST00000427494 NDUFC2-KCTD14E9PQ53 114 aa9.24□□□□□ -0.93
APOBEC3D-202ENST00000427494 SYCNQ0VAF6 134 aa9.24□□□□□ -0.93
APOBEC3D-202ENST00000427494 LINC00167Q96N53 147 aa9.24□□□□□ -0.93
APOBEC3D-202ENST00000427494 TRBV10-3A0A0K0K1G6 114 aa9.23□□□□□ -0.93
APOBEC3D-202ENST00000427494 HUWE1Q7Z6Z7 4374 aaKnown RBP9.23□□□□□ -0.93
APOBEC3D-202ENST00000427494 SNCGO76070 127 aa9.23□□□□□ -0.93
APOBEC3D-202ENST00000427494 GAGE2EQ4V326 116 aa9.23□□□□□ -0.93
APOBEC3D-202ENST00000427494 GAGE2DQ9UEU5 116 aa9.23□□□□□ -0.93
APOBEC3D-202ENST00000427494 VPREB1P12018 145 aa9.22□□□□□ -0.93
APOBEC3D-202ENST00000427494 C9orf129Q5T035 196 aaKnown RBP9.22□□□□□ -0.93
APOBEC3D-202ENST00000427494 ACYP1P07311 99 aa9.21□□□□□ -0.93
APOBEC3D-202ENST00000427494 LINC00575Q6W349 94 aa9.21□□□□□ -0.93
APOBEC3D-202ENST00000427494 UPK3BQ9BT76 320 aa9.21□□□□□ -0.93
APOBEC3D-202ENST00000427494 TRAV23DV6A0A075B6W5 121 aa9.21□□□□□ -0.94
APOBEC3D-202ENST00000427494 TTC32Q5I0X7 151 aa9.21□□□□□ -0.94
APOBEC3D-202ENST00000427494 Q6ZRP5 223 aa9.21□□□□□ -0.94
APOBEC3D-202ENST00000427494 RMI2Q96E14 147 aa9.21□□□□□ -0.94
APOBEC3D-202ENST00000427494 CASC10Q5T4H9 136 aa9.2□□□□□ -0.94
APOBEC3D-202ENST00000427494 OBSCN-AS1Q96MR7 158 aa9.2□□□□□ -0.94
APOBEC3D-202ENST00000427494 GAGE2AQ6NT46 116 aa9.19□□□□□ -0.94
APOBEC3D-202ENST00000427494 C14orf132Q9NPU4 83 aa9.19□□□□□ -0.94
APOBEC3D-202ENST00000427494 MGAM2Q2M2H8 2515 aa9.19□□□□□ -0.94
APOBEC3D-202ENST00000427494 USP17L23D6RBM5 183 aa9.19□□□□□ -0.94
APOBEC3D-202ENST00000427494 M0R378 163 aa9.19□□□□□ -0.94
APOBEC3D-202ENST00000427494 DIRC1Q969H9 104 aa9.19□□□□□ -0.94
APOBEC3D-202ENST00000427494 hADV29S1A0JD25 119 aa9.18□□□□□ -0.94
APOBEC3D-202ENST00000427494 LINC00528Q8N1L1 170 aa9.18□□□□□ -0.94
APOBEC3D-202ENST00000427494 A0A1B0GV72 72 aa9.17□□□□□ -0.94
APOBEC3D-202ENST00000427494 TMEM256-PLSCR3K7ERE1 68 aa9.17□□□□□ -0.94
APOBEC3D-202ENST00000427494 ZNF73O43830 326 aaPredicted RBP9.17□□□□□ -0.94
APOBEC3D-202ENST00000427494 B9D2Q9BPU9 175 aa9.17□□□□□ -0.94
APOBEC3D-202ENST00000427494 GAGE2BQ13066 116 aa9.15□□□□□ -0.95
APOBEC3D-202ENST00000427494 COX7BP24311 80 aa9.14□□□□□ -0.95
APOBEC3D-202ENST00000427494 SMCR5Q8TEV8 140 aa9.14□□□□□ -0.95
APOBEC3D-202ENST00000427494 TLX1NBP0CAT3 122 aa9.13□□□□□ -0.95
APOBEC3D-202ENST00000427494 JMJD7-PLA2G4BH0Y9G9 81 aa9.13□□□□□ -0.95
APOBEC3D-202ENST00000427494 UBE2DNLQ8IWF7 75 aa9.13□□□□□ -0.95
APOBEC3D-202ENST00000427494 ELOF1P60002 83 aaKnown RBP9.12□□□□□ -0.95
APOBEC3D-202ENST00000427494 NKAPP1Q8N9T2 125 aa9.12□□□□□ -0.95
APOBEC3D-202ENST00000427494 APLNQ9ULZ1 77 aa9.12□□□□□ -0.95
APOBEC3D-202ENST00000427494 TRBV7-6A0A0J9YX20 115 aa9.12□□□□□ -0.95
APOBEC3D-202ENST00000427494 SERTAD4-AS1Q5TG53 156 aa9.12□□□□□ -0.95
APOBEC3D-202ENST00000427494 Q6Q795 121 aa9.12□□□□□ -0.95
APOBEC3D-202ENST00000427494 COL7A1Q02388 2944 aa9.11□□□□□ -0.95
APOBEC3D-202ENST00000427494 Q6ZQY7 126 aa9.11□□□□□ -0.95
APOBEC3D-202ENST00000427494 SDIM1Q6ZPB5 146 aa9.1□□□□□ -0.95
APOBEC3D-202ENST00000427494 KRTAP1-5Q9BYS1 174 aa9.1□□□□□ -0.95
APOBEC3D-202ENST00000427494 LINC00643Q86TS7 51 aa9.1□□□□□ -0.95
APOBEC3D-202ENST00000427494 CCKP06307 115 aa9.08□□□□□ -0.96
APOBEC3D-202ENST00000427494 C7orf33Q8WU49 177 aa9.08□□□□□ -0.96
APOBEC3D-202ENST00000427494 TRBV7-7A0A0K0K1E9 115 aa9.08□□□□□ -0.96
APOBEC3D-202ENST00000427494 LAMTOR3Q9UHA4 124 aa9.08□□□□□ -0.96
APOBEC3D-202ENST00000427494 PLA2G2DQ9UNK4 145 aa9.08□□□□□ -0.96
APOBEC3D-202ENST00000427494 DNAH1Q9P2D7 4330 aa9.08□□□□□ -0.96
APOBEC3D-202ENST00000427494 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.07□□□□□ -0.96
APOBEC3D-202ENST00000427494 FAM168BA1KXE4 195 aa9.06□□□□□ -0.96
APOBEC3D-202ENST00000427494 H3BQ85 93 aa9.06□□□□□ -0.96
APOBEC3D-202ENST00000427494 LCE2BO14633 110 aa9.06□□□□□ -0.96
APOBEC3D-202ENST00000427494 DNAH9Q9NYC9 4486 aa9.06□□□□□ -0.96
APOBEC3D-202ENST00000427494 STAB2Q8WWQ8 2551 aa9.06□□□□□ -0.96
APOBEC3D-202ENST00000427494 LINC00846Q9NV44 126 aa9.06□□□□□ -0.96
APOBEC3D-202ENST00000427494 LOC107984640A0A0U1RRK4 108 aa9.05□□□□□ -0.96
APOBEC3D-202ENST00000427494 PSCAO43653 123 aa9.05□□□□□ -0.96
APOBEC3D-202ENST00000427494 KCNQ1DNQ9H478 68 aa9.05□□□□□ -0.96
APOBEC3D-202ENST00000427494 NHLRC4P0CG21 123 aaPredicted RBP9.04□□□□□ -0.96
APOBEC3D-202ENST00000427494 RBM3P98179 157 aaKnown RBP9.04□□□□□ -0.96
APOBEC3D-202ENST00000427494 IGLV5-37A0A075B6J1 123 aa9.04□□□□□ -0.96
APOBEC3D-202ENST00000427494 NDUFV3P56181 108 aaKnown RBP9.04□□□□□ -0.96
APOBEC3D-202ENST00000427494 ANAPC13Q9BS18 74 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms