RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 RPS10P5Q9NQ39 176 aa8.26□□□□□ -1.09
PDAP1-202ENST00000426447 Q8NBF4 154 aa8.25□□□□□ -1.09
PDAP1-202ENST00000426447 VPREB1P12018 145 aa8.24□□□□□ -1.09
PDAP1-202ENST00000426447 ERASQ7Z444 233 aa8.24□□□□□ -1.09
PDAP1-202ENST00000426447 SPRR4Q96PI1 79 aa8.24□□□□□ -1.09
PDAP1-202ENST00000426447 IGLV5-45A0A087WSX0 123 aa8.23□□□□□ -1.09
PDAP1-202ENST00000426447 SPINK1P00995 79 aa8.23□□□□□ -1.09
PDAP1-202ENST00000426447 SND1-IT1Q9HBX3 110 aa8.23□□□□□ -1.09
PDAP1-202ENST00000426447 NDUFA12Q9UI09 145 aa8.23□□□□□ -1.09
PDAP1-202ENST00000426447 ZNF706Q9Y5V0 76 aaPredicted RBP8.23□□□□□ -1.09
PDAP1-202ENST00000426447 MRPL18Q9H0U6 180 aaKnown RBP8.22□□□□□ -1.09
PDAP1-202ENST00000426447 H3BRM9 83 aa8.21□□□□□ -1.1
PDAP1-202ENST00000426447 SMCO4Q9NRQ5 59 aa8.21□□□□□ -1.1
PDAP1-202ENST00000426447 CST9LQ9H4G1 147 aa8.2□□□□□ -1.1
PDAP1-202ENST00000426447 ERG28Q9UKR5 140 aa8.2□□□□□ -1.1
PDAP1-202ENST00000426447 S100PP25815 95 aa8.18□□□□□ -1.1
PDAP1-202ENST00000426447 COX17Q14061 63 aa8.18□□□□□ -1.1
PDAP1-202ENST00000426447 YPEL4Q96NS1 127 aa8.18□□□□□ -1.1
PDAP1-202ENST00000426447 TRAV9-1A0A075B6T8 112 aa8.17□□□□□ -1.1
PDAP1-202ENST00000426447 PMVKQ15126 192 aa8.17□□□□□ -1.1
PDAP1-202ENST00000426447 ZNF625Q96I27 306 aaPredicted RBP8.17□□□□□ -1.1
PDAP1-202ENST00000426447 LINC01549A6NIU2 74 aa8.16□□□□□ -1.1
PDAP1-202ENST00000426447 LCE2CQ5TA81 110 aa8.16□□□□□ -1.1
PDAP1-202ENST00000426447 FAM19A2Q8N3H0 131 aa8.16□□□□□ -1.1
PDAP1-202ENST00000426447 CFC1BP0CG36 223 aa8.15□□□□□ -1.1
PDAP1-202ENST00000426447 KIAA1644Q3SXP7 199 aa8.15□□□□□ -1.1
PDAP1-202ENST00000426447 Q8NDZ9 215 aa8.15□□□□□ -1.1
PDAP1-202ENST00000426447 SMCR5Q8TEV8 140 aa8.15□□□□□ -1.1
PDAP1-202ENST00000426447 XP32Q5T750 250 aa8.14□□□□□ -1.11
PDAP1-202ENST00000426447 COLCA2A8K830 154 aa8.13□□□□□ -1.11
PDAP1-202ENST00000426447 IGLV9-49A0A0B4J1Y8 123 aa8.12□□□□□ -1.11
PDAP1-202ENST00000426447 IGLV5-39A0A0G2JS06 123 aa8.12□□□□□ -1.11
PDAP1-202ENST00000426447 SLC25A20O43772 301 aa8.12□□□□□ -1.11
PDAP1-202ENST00000426447 NDUFA6P56556 154 aa8.12□□□□□ -1.11
PDAP1-202ENST00000426447 LINC00158P58513 81 aa8.12□□□□□ -1.11
PDAP1-202ENST00000426447 GAGE2AQ6NT46 116 aa8.12□□□□□ -1.11
PDAP1-202ENST00000426447 Q8N377 158 aa8.12□□□□□ -1.11
PDAP1-202ENST00000426447 MT1HP80294 61 aa8.11□□□□□ -1.11
PDAP1-202ENST00000426447 MOBPQ13875 183 aa8.11□□□□□ -1.11
PDAP1-202ENST00000426447 ETDCA0A1B0GVM5 59 aa8.1□□□□□ -1.11
PDAP1-202ENST00000426447 RPS29P62273 56 aaKnown RBP8.1□□□□□ -1.11
PDAP1-202ENST00000426447 SSBP3-AS1Q7Z2R9 100 aa8.1□□□□□ -1.11
PDAP1-202ENST00000426447 A0A0U1RRA0 63 aa8.09□□□□□ -1.11
PDAP1-202ENST00000426447 PRYO14603 147 aa8.09□□□□□ -1.11
PDAP1-202ENST00000426447 IGLC3P0DOY3 106 aa8.09□□□□□ -1.11
PDAP1-202ENST00000426447 COX19Q49B96 90 aa8.09□□□□□ -1.11
PDAP1-202ENST00000426447 SFTA2Q6UW10 78 aa8.09□□□□□ -1.11
PDAP1-202ENST00000426447 ZNF22P17026 224 aaPredicted RBP8.08□□□□□ -1.12
PDAP1-202ENST00000426447 LINC00483Q53H64 154 aa8.08□□□□□ -1.12
PDAP1-202ENST00000426447 LINC01546A6NGU7 62 aa8.07□□□□□ -1.12
PDAP1-202ENST00000426447 KRTAP19-2Q3LHN2 52 aa8.07□□□□□ -1.12
PDAP1-202ENST00000426447 FA2HQ7L5A8 372 aa8.07□□□□□ -1.12
PDAP1-202ENST00000426447 IGLV8-61A0A075B6I0 122 aa8.06□□□□□ -1.12
PDAP1-202ENST00000426447 NCR3O14931 201 aa8.05□□□□□ -1.12
PDAP1-202ENST00000426447 SPRR1AP35321 89 aa8.05□□□□□ -1.12
PDAP1-202ENST00000426447 S100A12P80511 92 aa8.05□□□□□ -1.12
PDAP1-202ENST00000426447 PCOTHQ58A44 107 aa8.05□□□□□ -1.12
PDAP1-202ENST00000426447 TMEM170BQ5T4T1 132 aa8.05□□□□□ -1.12
PDAP1-202ENST00000426447 BOD1L2Q8IYS8 172 aa8.05□□□□□ -1.12
PDAP1-202ENST00000426447 KCNQ1DNQ9H478 68 aa8.05□□□□□ -1.12
PDAP1-202ENST00000426447 TRAPPC1Q9Y5R8 145 aa8.05□□□□□ -1.12
PDAP1-202ENST00000426447 M0R2T5 61 aa8.04□□□□□ -1.12
PDAP1-202ENST00000426447 TRGC2P03986 189 aa8.03□□□□□ -1.12
PDAP1-202ENST00000426447 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
PDAP1-202ENST00000426447 KRTAP10-6P60371 365 aaPredicted RBP8.03□□□□□ -1.12
PDAP1-202ENST00000426447 FABP9Q0Z7S8 132 aa8.03□□□□□ -1.12
PDAP1-202ENST00000426447 KRTAP4-16G5E9R7 235 aaPredicted RBP8.02□□□□□ -1.13
PDAP1-202ENST00000426447 C9orf153Q5TBE3 101 aa8.01□□□□□ -1.13
PDAP1-202ENST00000426447 TRBV10-3A0A0K0K1G6 114 aa8□□□□□ -1.13
PDAP1-202ENST00000426447 C11orf86A6NJI1 115 aa8□□□□□ -1.13
PDAP1-202ENST00000426447 ERC2-IT1O76042 136 aa8□□□□□ -1.13
PDAP1-202ENST00000426447 SMIM13P0DJ93 91 aa8□□□□□ -1.13
PDAP1-202ENST00000426447 MEIG1Q5JSS6 88 aa8□□□□□ -1.13
PDAP1-202ENST00000426447 BAGE3Q86Y29 109 aa8□□□□□ -1.13
PDAP1-202ENST00000426447 B5MCH6 92 aa7.99□□□□□ -1.13
PDAP1-202ENST00000426447 C9orf92A6NGG3 77 aa7.97□□□□□ -1.13
PDAP1-202ENST00000426447 MIR7-3HGQ8N6C7 128 aa7.97□□□□□ -1.13
PDAP1-202ENST00000426447 A0A096LNJ9 63 aa7.95□□□□□ -1.14
PDAP1-202ENST00000426447 HIST1H2BKO60814 126 aa7.95□□□□□ -1.14
PDAP1-202ENST00000426447 HIST1H2BJP06899 126 aa7.95□□□□□ -1.14
PDAP1-202ENST00000426447 HIST1H2BOP23527 126 aa7.95□□□□□ -1.14
PDAP1-202ENST00000426447 HIST1H2BBP33778 126 aa7.95□□□□□ -1.14
PDAP1-202ENST00000426447 HIST1H2BDP58876 126 aa7.95□□□□□ -1.14
PDAP1-202ENST00000426447 HIST1H2BCP62807 126 aa7.95□□□□□ -1.14
PDAP1-202ENST00000426447 HIST2H2BEQ16778 126 aa7.95□□□□□ -1.14
PDAP1-202ENST00000426447 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.95□□□□□ -1.14
PDAP1-202ENST00000426447 HIST1H2BHQ93079 126 aa7.95□□□□□ -1.14
PDAP1-202ENST00000426447 HIST1H2BNQ99877 126 aa7.95□□□□□ -1.14
PDAP1-202ENST00000426447 HIST1H2BMQ99879 126 aa7.95□□□□□ -1.14
PDAP1-202ENST00000426447 Q9BRP9 147 aa7.95□□□□□ -1.14
PDAP1-202ENST00000426447 LINC00587B1AMM8 73 aa7.94□□□□□ -1.14
PDAP1-202ENST00000426447 HBDP02042 147 aa7.94□□□□□ -1.14
PDAP1-202ENST00000426447 COX6B2Q6YFQ2 88 aa7.94□□□□□ -1.14
PDAP1-202ENST00000426447 C18orf32Q8TCD1 76 aa7.94□□□□□ -1.14
PDAP1-202ENST00000426447 CHTOPQ9Y3Y2 248 aaKnown RBP7.94□□□□□ -1.14
PDAP1-202ENST00000426447 LINC00614P0C842 121 aa7.93□□□□□ -1.14
PDAP1-202ENST00000426447 DDTP30046 118 aa7.93□□□□□ -1.14
PDAP1-202ENST00000426447 PMCHL1Q16048 86 aa7.93□□□□□ -1.14
PDAP1-202ENST00000426447 Q6ZRX8 168 aa7.93□□□□□ -1.14
PDAP1-202ENST00000426447 TMEM223A0PJW6 202 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms