RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 A0A0U1RRA0 63 aa7.79□□□□□ -1.16
GPC1-204ENST00000426280 J3QQQ9 107 aa7.79□□□□□ -1.16
GPC1-204ENST00000426280 KRTAP10-8P60410 259 aa7.79□□□□□ -1.16
GPC1-204ENST00000426280 SERTAD4-AS1Q5TG53 156 aa7.79□□□□□ -1.16
GPC1-204ENST00000426280 PLEKHB2Q96CS7 222 aa7.79□□□□□ -1.16
GPC1-204ENST00000426280 NDUFA12Q9UI09 145 aa7.79□□□□□ -1.16
GPC1-204ENST00000426280 TNXBP22105 4242 aa7.79□□□□□ -1.16
GPC1-204ENST00000426280 C20orf202A1L168 122 aa7.78□□□□□ -1.16
GPC1-204ENST00000426280 C1orf137Q5JT78 98 aa7.78□□□□□ -1.16
GPC1-204ENST00000426280 IGKV2D-26A0A0A0MRZ7 120 aa7.77□□□□□ -1.17
GPC1-204ENST00000426280 E9PLD3 99 aa7.77□□□□□ -1.17
GPC1-204ENST00000426280 TMA7Q9Y2S6 64 aaKnown RBP7.77□□□□□ -1.17
GPC1-204ENST00000426280 MYMXA0A1B0GTQ4 84 aa7.76□□□□□ -1.17
GPC1-204ENST00000426280 SMIM13P0DJ93 91 aa7.76□□□□□ -1.17
GPC1-204ENST00000426280 LGALS3P17931 250 aaKnown RBP7.76□□□□□ -1.17
GPC1-204ENST00000426280 LINC00158P58513 81 aa7.76□□□□□ -1.17
GPC1-204ENST00000426280 ANKRD39Q53RE8 183 aa7.76□□□□□ -1.17
GPC1-204ENST00000426280 SFTA2Q6UW10 78 aa7.76□□□□□ -1.17
GPC1-204ENST00000426280 MEIG1Q5JSS6 88 aa7.75□□□□□ -1.17
GPC1-204ENST00000426280 TTTY13Q9BZ97 58 aa7.75□□□□□ -1.17
GPC1-204ENST00000426280 SND1-IT1Q9HBX3 110 aa7.75□□□□□ -1.17
GPC1-204ENST00000426280 M0QXV9 152 aa7.74□□□□□ -1.17
GPC1-204ENST00000426280 IGLV7-43P04211 117 aa7.74□□□□□ -1.17
GPC1-204ENST00000426280 HERV-K104P63124 156 aa7.74□□□□□ -1.17
GPC1-204ENST00000426280 COX17Q14061 63 aa7.74□□□□□ -1.17
GPC1-204ENST00000426280 Q8NDZ9 215 aa7.73□□□□□ -1.17
GPC1-204ENST00000426280 PLA2G2DQ9UNK4 145 aa7.73□□□□□ -1.17
GPC1-204ENST00000426280 C22orf24Q9Y442 160 aa7.73□□□□□ -1.17
GPC1-204ENST00000426280 NMUP48645 174 aa7.72□□□□□ -1.17
GPC1-204ENST00000426280 MIR7-3HGQ8N6C7 128 aa7.72□□□□□ -1.17
GPC1-204ENST00000426280 DAND5Q8N907 189 aa7.72□□□□□ -1.17
GPC1-204ENST00000426280 A0A0J9YXY3 114 aa7.71□□□□□ -1.18
GPC1-204ENST00000426280 SCGB1D1O95968 90 aa7.71□□□□□ -1.18
GPC1-204ENST00000426280 ZNF815PA8K554 130 aa7.7□□□□□ -1.18
GPC1-204ENST00000426280 REG3GQ6UW15 175 aa7.7□□□□□ -1.18
GPC1-204ENST00000426280 GAGE10A6NGK3 116 aa7.69□□□□□ -1.18
GPC1-204ENST00000426280 VPREB1P12018 145 aa7.69□□□□□ -1.18
GPC1-204ENST00000426280 UBE2BP63146 152 aa7.69□□□□□ -1.18
GPC1-204ENST00000426280 KRTAP1-4P0C5Y4 121 aa7.68□□□□□ -1.18
GPC1-204ENST00000426280 AKR1D1P51857 326 aa7.68□□□□□ -1.18
GPC1-204ENST00000426280 ADAMTSL4-AS1Q5T5F5 129 aa7.68□□□□□ -1.18
GPC1-204ENST00000426280 MRPL55Q7Z7F7 128 aaKnown RBP7.68□□□□□ -1.18
GPC1-204ENST00000426280 PCP2Q8IVA1 136 aa7.68□□□□□ -1.18
GPC1-204ENST00000426280 PRR26Q8N8Z3 221 aa7.68□□□□□ -1.18
GPC1-204ENST00000426280 IGLV5-37A0A075B6J1 123 aa7.67□□□□□ -1.18
GPC1-204ENST00000426280 LINC00587B1AMM8 73 aa7.67□□□□□ -1.18
GPC1-204ENST00000426280 H0Y9J4 135 aa7.67□□□□□ -1.18
GPC1-204ENST00000426280 NPC2P61916 151 aa7.67□□□□□ -1.18
GPC1-204ENST00000426280 NKAPP1Q8N9T2 125 aa7.67□□□□□ -1.18
GPC1-204ENST00000426280 LINC00167Q96N53 147 aa7.67□□□□□ -1.18
GPC1-204ENST00000426280 UBR4Q5T4S7 5183 aa7.67□□□□□ -1.18
GPC1-204ENST00000426280 RPL37AP8A6NKH3 93 aa7.66□□□□□ -1.18
GPC1-204ENST00000426280 EIF4EBP3O60516 100 aaPredicted RBP7.66□□□□□ -1.18
GPC1-204ENST00000426280 SOSTDC1Q6X4U4 206 aa7.66□□□□□ -1.18
GPC1-204ENST00000426280 BOD1L2Q8IYS8 172 aa7.66□□□□□ -1.18
GPC1-204ENST00000426280 LITAFQ99732 161 aa7.66□□□□□ -1.18
GPC1-204ENST00000426280 TP73-AS1Q9UF72 201 aa7.66□□□□□ -1.18
GPC1-204ENST00000426280 RPL24P83731 157 aaKnown RBP7.65□□□□□ -1.18
GPC1-204ENST00000426280 LBHQ53QV2 105 aaPredicted RBP7.65□□□□□ -1.18
GPC1-204ENST00000426280 DIRC1Q969H9 104 aa7.65□□□□□ -1.18
GPC1-204ENST00000426280 HSBP1L1C9JCN9 74 aa7.64□□□□□ -1.19
GPC1-204ENST00000426280 JOSD1Q15040 202 aaPredicted RBP7.64□□□□□ -1.19
GPC1-204ENST00000426280 NCR3O14931 201 aa7.63□□□□□ -1.19
GPC1-204ENST00000426280 IGKV2-28A0A075B6P5 120 aa7.62□□□□□ -1.19
GPC1-204ENST00000426280 LOC107984156A0A0G2JMH3 177 aa7.62□□□□□ -1.19
GPC1-204ENST00000426280 ZNF861PO60384 105 aa7.62□□□□□ -1.19
GPC1-204ENST00000426280 TIMM17BO60830 172 aa7.62□□□□□ -1.19
GPC1-204ENST00000426280 IGKV2D-28P01615 120 aa7.62□□□□□ -1.19
GPC1-204ENST00000426280 SCGB1D4Q6XE38 83 aa7.62□□□□□ -1.19
GPC1-204ENST00000426280 ARL17AQ8IVW1 177 aa7.62□□□□□ -1.19
GPC1-204ENST00000426280 LINC00308Q8TCZ7 52 aa7.61□□□□□ -1.19
GPC1-204ENST00000426280 MIEN1Q9BRT3 115 aa7.61□□□□□ -1.19
GPC1-204ENST00000426280 PAM16Q9Y3D7 125 aa7.61□□□□□ -1.19
GPC1-204ENST00000426280 IGLV1-50A0A075B6I6 118 aa7.6□□□□□ -1.19
GPC1-204ENST00000426280 M0R378 163 aa7.6□□□□□ -1.19
GPC1-204ENST00000426280 PYY3Q5JQD4 70 aa7.6□□□□□ -1.19
GPC1-204ENST00000426280 SPATA45Q537H7 98 aa7.59□□□□□ -1.19
GPC1-204ENST00000426280 TMEM238C9JI98 176 aa7.58□□□□□ -1.2
GPC1-204ENST00000426280 BCE1O60756 84 aa7.58□□□□□ -1.2
GPC1-204ENST00000426280 KRTAP13-1Q8IUC0 172 aa7.58□□□□□ -1.2
GPC1-204ENST00000426280 SPANXDQ9BXN6 97 aa7.58□□□□□ -1.2
GPC1-204ENST00000426280 SPANXCQ9NY87 97 aa7.58□□□□□ -1.2
GPC1-204ENST00000426280 ANAPC11Q9NYG5 84 aa7.58□□□□□ -1.2
GPC1-204ENST00000426280 LRP2P98164 4655 aa7.57□□□□□ -1.2
GPC1-204ENST00000426280 COX8AP10176 69 aa7.57□□□□□ -1.2
GPC1-204ENST00000426280 C14orf144Q96I85 54 aa7.57□□□□□ -1.2
GPC1-204ENST00000426280 VAMP8Q9BV40 100 aa7.57□□□□□ -1.2
GPC1-204ENST00000426280 TRBV10-3A0A0K0K1G6 114 aa7.56□□□□□ -1.2
GPC1-204ENST00000426280 NDUFC2O95298 119 aa7.56□□□□□ -1.2
GPC1-204ENST00000426280 TMEM126AQ9H061 195 aa7.56□□□□□ -1.2
GPC1-204ENST00000426280 A0A087X002 238 aa7.55□□□□□ -1.2
GPC1-204ENST00000426280 MUSTN1Q8IVN3 82 aa7.55□□□□□ -1.2
GPC1-204ENST00000426280 SPANXB1Q9NS25 103 aaPredicted RBP7.55□□□□□ -1.2
GPC1-204ENST00000426280 TRBV10-2A0A0K0K1G8 114 aa7.54□□□□□ -1.2
GPC1-204ENST00000426280 DDTP30046 118 aa7.53□□□□□ -1.2
GPC1-204ENST00000426280 PRLHP81277 87 aa7.53□□□□□ -1.2
GPC1-204ENST00000426280 FAM19A1Q7Z5A9 133 aa7.53□□□□□ -1.2
GPC1-204ENST00000426280 LPAP08519 4548 aa7.52□□□□□ -1.21
GPC1-204ENST00000426280 PRYO14603 147 aa7.52□□□□□ -1.21
GPC1-204ENST00000426280 IFITM1P13164 125 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms