RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 A0A087WYN8 130 aa4.46□□□□□ -1.7
CHCHD3P1-201ENST00000425516 HERVK_113P61574 105 aa4.46□□□□□ -1.7
CHCHD3P1-201ENST00000425516 HAMPP81172 84 aa4.46□□□□□ -1.7
CHCHD3P1-201ENST00000425516 SCXQ7RTU7 201 aa4.46□□□□□ -1.7
CHCHD3P1-201ENST00000425516 CIRBP-AS1Q8TBR5 109 aa4.46□□□□□ -1.7
CHCHD3P1-201ENST00000425516 PLAC8Q9NZF1 115 aa4.46□□□□□ -1.7
CHCHD3P1-201ENST00000425516 NDUFA12Q9UI09 145 aa4.46□□□□□ -1.7
CHCHD3P1-201ENST00000425516 PKIGQ9Y2B9 76 aa4.46□□□□□ -1.7
CHCHD3P1-201ENST00000425516 IGKV2-24A0A0C4DH68 120 aa4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 MYMXA0A1B0GTQ4 84 aa4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 A0A1W2PNN7 141 aa4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 NMUP48645 174 aa4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 HERV-K104P63124 156 aa4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 RPL18AQ02543 176 aaKnown RBP4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 GAGE2BQ13066 116 aa4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 COX17Q14061 63 aa4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 JOSD1Q15040 202 aaPredicted RBP4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 MAJINQ3KP22 176 aa4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 C9orf129Q5T035 196 aaKnown RBP4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 KRTAP7-1Q8IUC3 87 aa4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 LINC00474Q9P2X8 69 aa4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 ERG28Q9UKR5 140 aa4.45□□□□□ -1.7
CHCHD3P1-201ENST00000425516 SCGB1D1O95968 90 aa4.44□□□□□ -1.7
CHCHD3P1-201ENST00000425516 GAGE2EQ4V326 116 aa4.44□□□□□ -1.7
CHCHD3P1-201ENST00000425516 TTTY13Q9BZ97 58 aa4.44□□□□□ -1.7
CHCHD3P1-201ENST00000425516 GAGE2DQ9UEU5 116 aa4.44□□□□□ -1.7
CHCHD3P1-201ENST00000425516 FAM168BA1KXE4 195 aa4.43□□□□□ -1.7
CHCHD3P1-201ENST00000425516 SMIM13P0DJ93 91 aa4.43□□□□□ -1.7
CHCHD3P1-201ENST00000425516 LGALS3P17931 250 aaKnown RBP4.43□□□□□ -1.7
CHCHD3P1-201ENST00000425516 PFN2P35080 140 aa4.43□□□□□ -1.7
CHCHD3P1-201ENST00000425516 PYY3Q5JQD4 70 aa4.43□□□□□ -1.7
CHCHD3P1-201ENST00000425516 XAGE1AQ9HD64 81 aa4.43□□□□□ -1.7
CHCHD3P1-201ENST00000425516 RYR1P21817 5038 aa4.43□□□□□ -1.7
CHCHD3P1-201ENST00000425516 A0A0J9YXY3 114 aa4.42□□□□□ -1.7
CHCHD3P1-201ENST00000425516 LINC00587B1AMM8 73 aa4.42□□□□□ -1.7
CHCHD3P1-201ENST00000425516 SMR3BP02814 79 aaPredicted RBP4.42□□□□□ -1.7
CHCHD3P1-201ENST00000425516 LINC00158P58513 81 aa4.42□□□□□ -1.7
CHCHD3P1-201ENST00000425516 PCP2Q8IVA1 136 aa4.42□□□□□ -1.7
CHCHD3P1-201ENST00000425516 DPH3Q96FX2 82 aa4.42□□□□□ -1.7
CHCHD3P1-201ENST00000425516 LITAFQ99732 161 aa4.42□□□□□ -1.7
CHCHD3P1-201ENST00000425516 SND1-IT1Q9HBX3 110 aa4.42□□□□□ -1.7
CHCHD3P1-201ENST00000425516 FAT1Q14517 4588 aa4.41□□□□□ -1.7
CHCHD3P1-201ENST00000425516 LOC107984156A0A0G2JMH3 177 aa4.41□□□□□ -1.7
CHCHD3P1-201ENST00000425516 A0A0U1RRA0 63 aa4.41□□□□□ -1.7
CHCHD3P1-201ENST00000425516 ZNF815PA8K554 130 aa4.41□□□□□ -1.7
CHCHD3P1-201ENST00000425516 ADAMTSL4-AS1Q5T5F5 129 aa4.41□□□□□ -1.7
CHCHD3P1-201ENST00000425516 SERTAD4-AS1Q5TG53 156 aa4.41□□□□□ -1.7
CHCHD3P1-201ENST00000425516 ARL17AQ8IVW1 177 aa4.41□□□□□ -1.7
CHCHD3P1-201ENST00000425516 MIR7-3HGQ8N6C7 128 aa4.41□□□□□ -1.7
CHCHD3P1-201ENST00000425516 Q8NDZ9 215 aa4.41□□□□□ -1.7
CHCHD3P1-201ENST00000425516 KIAA1109Q2LD37 5005 aa4.41□□□□□ -1.7
CHCHD3P1-201ENST00000425516 IGLV5-37A0A075B6J1 123 aa4.4□□□□□ -1.71
CHCHD3P1-201ENST00000425516 HSBP1L1C9JCN9 74 aa4.4□□□□□ -1.71
CHCHD3P1-201ENST00000425516 TIMM17BO60830 172 aa4.4□□□□□ -1.71
CHCHD3P1-201ENST00000425516 KRTAP10-4P60372 401 aaPredicted RBP4.4□□□□□ -1.71
CHCHD3P1-201ENST00000425516 MEIG1Q5JSS6 88 aa4.4□□□□□ -1.71
CHCHD3P1-201ENST00000425516 LOC105371267A0A1B0GV96 52 aa4.39□□□□□ -1.71
CHCHD3P1-201ENST00000425516 VPREB1P12018 145 aa4.39□□□□□ -1.71
CHCHD3P1-201ENST00000425516 SOSTDC1Q6X4U4 206 aa4.39□□□□□ -1.71
CHCHD3P1-201ENST00000425516 PHF5AQ7RTV0 110 aaKnown RBP4.39□□□□□ -1.71
CHCHD3P1-201ENST00000425516 FAM19A5Q7Z5A7 132 aaPredicted RBP4.39□□□□□ -1.71
CHCHD3P1-201ENST00000425516 KRTAP11-1Q8IUC1 163 aa4.39□□□□□ -1.71
CHCHD3P1-201ENST00000425516 BOD1L2Q8IYS8 172 aa4.39□□□□□ -1.71
CHCHD3P1-201ENST00000425516 DAND5Q8N907 189 aa4.39□□□□□ -1.71
CHCHD3P1-201ENST00000425516 TP73-AS1Q9UF72 201 aa4.39□□□□□ -1.71
CHCHD3P1-201ENST00000425516 C22orf24Q9Y442 160 aa4.39□□□□□ -1.71
CHCHD3P1-201ENST00000425516 HERC2O95714 4834 aa4.39□□□□□ -1.71
CHCHD3P1-201ENST00000425516 SRRM2Q9UQ35 2752 aaKnown RBP4.39□□□□□ -1.71
CHCHD3P1-201ENST00000425516 DLEU1O43261 78 aa4.38□□□□□ -1.71
CHCHD3P1-201ENST00000425516 COX8AP10176 69 aa4.38□□□□□ -1.71
CHCHD3P1-201ENST00000425516 SPANXDQ9BXN6 97 aa4.38□□□□□ -1.71
CHCHD3P1-201ENST00000425516 SPANXCQ9NY87 97 aa4.38□□□□□ -1.71
CHCHD3P1-201ENST00000425516 PAM16Q9Y3D7 125 aa4.38□□□□□ -1.71
CHCHD3P1-201ENST00000425516 M0QXV9 152 aa4.37□□□□□ -1.71
CHCHD3P1-201ENST00000425516 SPATA45Q537H7 98 aa4.37□□□□□ -1.71
CHCHD3P1-201ENST00000425516 LINC00308Q8TCZ7 52 aa4.37□□□□□ -1.71
CHCHD3P1-201ENST00000425516 LINC00167Q96N53 147 aa4.37□□□□□ -1.71
CHCHD3P1-201ENST00000425516 VAMP8Q9BV40 100 aa4.37□□□□□ -1.71
CHCHD3P1-201ENST00000425516 PKHD1L1Q86WI1 4243 aa4.36□□□□□ -1.71
CHCHD3P1-201ENST00000425516 NDUFC2O95298 119 aa4.36□□□□□ -1.71
CHCHD3P1-201ENST00000425516 PRR3P79522 188 aaKnown RBP4.36□□□□□ -1.71
CHCHD3P1-201ENST00000425516 RPL24P83731 157 aaKnown RBP4.36□□□□□ -1.71
CHCHD3P1-201ENST00000425516 Q5VSD8 79 aa4.36□□□□□ -1.71
CHCHD3P1-201ENST00000425516 SCGB1D4Q6XE38 83 aa4.36□□□□□ -1.71
CHCHD3P1-201ENST00000425516 MRPL55Q7Z7F7 128 aaKnown RBP4.36□□□□□ -1.71
CHCHD3P1-201ENST00000425516 C7orf33Q8WU49 177 aa4.36□□□□□ -1.71
CHCHD3P1-201ENST00000425516 C14orf144Q96I85 54 aa4.36□□□□□ -1.71
CHCHD3P1-201ENST00000425516 PPDPFQ9H3Y8 114 aa4.36□□□□□ -1.71
CHCHD3P1-201ENST00000425516 SPANXB1Q9NS25 103 aaPredicted RBP4.36□□□□□ -1.71
CHCHD3P1-201ENST00000425516 PSORS1C2Q9UIG4 136 aa4.36□□□□□ -1.71
CHCHD3P1-201ENST00000425516 IGLV1-50A0A075B6I6 118 aa4.35□□□□□ -1.71
CHCHD3P1-201ENST00000425516 TMEM238C9JI98 176 aa4.35□□□□□ -1.71
CHCHD3P1-201ENST00000425516 M0R378 163 aa4.35□□□□□ -1.71
CHCHD3P1-201ENST00000425516 IFITM1P13164 125 aa4.35□□□□□ -1.71
CHCHD3P1-201ENST00000425516 RPL37AP61513 92 aaKnown RBP4.35□□□□□ -1.71
CHCHD3P1-201ENST00000425516 NPC2P61916 151 aa4.35□□□□□ -1.71
CHCHD3P1-201ENST00000425516 LBHQ53QV2 105 aaPredicted RBP4.35□□□□□ -1.71
CHCHD3P1-201ENST00000425516 Q6ZVH6 145 aa4.35□□□□□ -1.71
CHCHD3P1-201ENST00000425516 IGKV2-28A0A075B6P5 120 aa4.34□□□□□ -1.71
CHCHD3P1-201ENST00000425516 TRBV10-2A0A0K0K1G8 114 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms