RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 Q6Q795 121 aa7.8□□□□□ -1.16
UBR4-207ENST00000425413 PRR34Q9NV39 138 aa7.8□□□□□ -1.16
UBR4-207ENST00000425413 DEFB131BA0A096LNP1 70 aa7.79□□□□□ -1.16
UBR4-207ENST00000425413 CXCL5P42830 114 aa7.79□□□□□ -1.16
UBR4-207ENST00000425413 LINC01561Q8N1V8 128 aa7.79□□□□□ -1.16
UBR4-207ENST00000425413 C14orf132Q9NPU4 83 aa7.79□□□□□ -1.16
UBR4-207ENST00000425413 C11orf45Q8TAV5 145 aa7.78□□□□□ -1.16
UBR4-207ENST00000425413 PPDPFQ9H3Y8 114 aa7.78□□□□□ -1.16
UBR4-207ENST00000425413 ACYP1P07311 99 aa7.78□□□□□ -1.16
UBR4-207ENST00000425413 EGFEM1PQ0D2K5 195 aa7.78□□□□□ -1.16
UBR4-207ENST00000425413 S100A7L2Q5SY68 101 aa7.78□□□□□ -1.16
UBR4-207ENST00000425413 KLK5Q9Y337 293 aaPredicted RBP7.78□□□□□ -1.16
UBR4-207ENST00000425413 FAM236AA0A1B0GUQ0 79 aa7.77□□□□□ -1.17
UBR4-207ENST00000425413 FAM236BA0A1B0GV22 79 aa7.77□□□□□ -1.17
UBR4-207ENST00000425413 H0YGX0 51 aa7.77□□□□□ -1.17
UBR4-207ENST00000425413 INAFM2P0DMQ5 153 aa7.77□□□□□ -1.17
UBR4-207ENST00000425413 RPL18AQ02543 176 aaKnown RBP7.77□□□□□ -1.17
UBR4-207ENST00000425413 COX17Q14061 63 aa7.76□□□□□ -1.17
UBR4-207ENST00000425413 C6orf99Q4VX62 202 aa7.76□□□□□ -1.17
UBR4-207ENST00000425413 C6orf48Q9UBA6 75 aa7.76□□□□□ -1.17
UBR4-207ENST00000425413 ZNF561-AS1K7EIQ3 104 aa7.75□□□□□ -1.17
UBR4-207ENST00000425413 IGKV2D-24A0A075B6R9 120 aa7.75□□□□□ -1.17
UBR4-207ENST00000425413 TMEM126AQ9H061 195 aa7.75□□□□□ -1.17
UBR4-207ENST00000425413 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
UBR4-207ENST00000425413 CAMK2N2Q96S95 79 aa7.74□□□□□ -1.17
UBR4-207ENST00000425413 CMYA5Q8N3K9 4069 aa7.74□□□□□ -1.17
UBR4-207ENST00000425413 TRBV7-7A0A0K0K1E9 115 aa7.74□□□□□ -1.17
UBR4-207ENST00000425413 STAB2Q8WWQ8 2551 aa7.73□□□□□ -1.17
UBR4-207ENST00000425413 NDUFC2O95298 119 aa7.72□□□□□ -1.17
UBR4-207ENST00000425413 C1orf43Q9BWL3 253 aa7.72□□□□□ -1.17
UBR4-207ENST00000425413 IGKV3D-7A0A0C4DH55 119 aa7.71□□□□□ -1.17
UBR4-207ENST00000425413 Q6ZRU5 148 aa7.71□□□□□ -1.17
UBR4-207ENST00000425413 ORMDL1Q9P0S3 153 aa7.71□□□□□ -1.17
UBR4-207ENST00000425413 SDIM1Q6ZPB5 146 aa7.71□□□□□ -1.18
UBR4-207ENST00000425413 Q8N814 137 aa7.71□□□□□ -1.18
UBR4-207ENST00000425413 H3BNG1 76 aa7.7□□□□□ -1.18
UBR4-207ENST00000425413 TRBV10-3A0A0K0K1G6 114 aa7.7□□□□□ -1.18
UBR4-207ENST00000425413 KRTAP26-1Q6PEX3 210 aa7.7□□□□□ -1.18
UBR4-207ENST00000425413 C15orf56Q8N910 161 aa7.7□□□□□ -1.18
UBR4-207ENST00000425413 LINC00846Q9NV44 126 aa7.69□□□□□ -1.18
UBR4-207ENST00000425413 IMUPQ9GZP8 106 aa7.68□□□□□ -1.18
UBR4-207ENST00000425413 K7EIL1 84 aa7.67□□□□□ -1.18
UBR4-207ENST00000425413 LINC01556Q5JQF7 62 aa7.66□□□□□ -1.18
UBR4-207ENST00000425413 CASC10Q5T4H9 136 aa7.66□□□□□ -1.18
UBR4-207ENST00000425413 GVQW2A0A096LPI5 108 aaPredicted RBP7.65□□□□□ -1.18
UBR4-207ENST00000425413 LINC00575Q6W349 94 aa7.65□□□□□ -1.18
UBR4-207ENST00000425413 TENM2Q9NT68 2774 aa7.65□□□□□ -1.18
UBR4-207ENST00000425413 LINC00588Q9Y4M8 146 aa7.65□□□□□ -1.18
UBR4-207ENST00000425413 A0A087WVE0 104 aa7.65□□□□□ -1.19
UBR4-207ENST00000425413 IGLV6-57P01721 117 aa7.65□□□□□ -1.19
UBR4-207ENST00000425413 hADV29S1A0JD25 119 aa7.64□□□□□ -1.19
UBR4-207ENST00000425413 TRAV23DV6A0A075B6W5 121 aa7.64□□□□□ -1.19
UBR4-207ENST00000425413 TRAV10A0A0B4J240 114 aa7.64□□□□□ -1.19
UBR4-207ENST00000425413 Q6ZQY7 126 aa7.64□□□□□ -1.19
UBR4-207ENST00000425413 Q6ZRP5 223 aa7.64□□□□□ -1.19
UBR4-207ENST00000425413 C9orf153Q5TBE3 101 aa7.63□□□□□ -1.19
UBR4-207ENST00000425413 OBSCN-AS1Q96MR7 158 aa7.63□□□□□ -1.19
UBR4-207ENST00000425413 HIST1H4AP62805 103 aaKnown RBP7.62□□□□□ -1.19
UBR4-207ENST00000425413 SYCNQ0VAF6 134 aa7.62□□□□□ -1.19
UBR4-207ENST00000425413 LAMTOR3Q9UHA4 124 aa7.62□□□□□ -1.19
UBR4-207ENST00000425413 COL7A1Q02388 2944 aa7.62□□□□□ -1.19
UBR4-207ENST00000425413 NDUFC2-KCTD14E9PQ53 114 aa7.62□□□□□ -1.19
UBR4-207ENST00000425413 TMEM256-PLSCR3K7ERE1 68 aa7.62□□□□□ -1.19
UBR4-207ENST00000425413 VPREB1P12018 145 aa7.62□□□□□ -1.19
UBR4-207ENST00000425413 DNAH3Q8TD57 4116 aa7.62□□□□□ -1.19
UBR4-207ENST00000425413 ZNF73O43830 326 aaPredicted RBP7.62□□□□□ -1.19
UBR4-207ENST00000425413 DIRC1Q969H9 104 aa7.62□□□□□ -1.19
UBR4-207ENST00000425413 HUWE1Q7Z6Z7 4374 aaKnown RBP7.61□□□□□ -1.19
UBR4-207ENST00000425413 CCKP06307 115 aa7.61□□□□□ -1.19
UBR4-207ENST00000425413 SMIM20Q8N5G0 67 aa7.61□□□□□ -1.19
UBR4-207ENST00000425413 LINC00167Q96N53 147 aa7.61□□□□□ -1.19
UBR4-207ENST00000425413 TM2D3Q9BRN9 247 aa7.61□□□□□ -1.19
UBR4-207ENST00000425413 DNAH10OSP0CZ25 163 aa7.6□□□□□ -1.19
UBR4-207ENST00000425413 JMJD7-PLA2G4BH0Y9G9 81 aa7.6□□□□□ -1.19
UBR4-207ENST00000425413 C3orf22Q8N5N4 141 aa7.6□□□□□ -1.19
UBR4-207ENST00000425413 MUC7Q8TAX7 377 aa7.59□□□□□ -1.19
UBR4-207ENST00000425413 A0A1B0GX51 115 aa7.59□□□□□ -1.19
UBR4-207ENST00000425413 USP17L23D6RBM5 183 aa7.59□□□□□ -1.19
UBR4-207ENST00000425413 Q6JHZ5 121 aa7.59□□□□□ -1.19
UBR4-207ENST00000425413 C2orf48Q96LS8 159 aa7.59□□□□□ -1.19
UBR4-207ENST00000425413 COX7BP24311 80 aa7.58□□□□□ -1.2
UBR4-207ENST00000425413 SERTAD4-AS1Q5TG53 156 aa7.58□□□□□ -1.2
UBR4-207ENST00000425413 FAM168BA1KXE4 195 aa7.57□□□□□ -1.2
UBR4-207ENST00000425413 M0R378 163 aa7.57□□□□□ -1.2
UBR4-207ENST00000425413 UQCRQO14949 82 aa7.57□□□□□ -1.2
UBR4-207ENST00000425413 M0R2N4 97 aa7.57□□□□□ -1.2
UBR4-207ENST00000425413 RPL37AP8A6NKH3 93 aa7.56□□□□□ -1.2
UBR4-207ENST00000425413 LYSTQ99698 3801 aa7.56□□□□□ -1.2
UBR4-207ENST00000425413 ATOX1O00244 68 aa7.56□□□□□ -1.2
UBR4-207ENST00000425413 NKAPP1Q8N9T2 125 aa7.56□□□□□ -1.2
UBR4-207ENST00000425413 MDFIQ99750 246 aa7.56□□□□□ -1.2
UBR4-207ENST00000425413 RBM3P98179 157 aaKnown RBP7.56□□□□□ -1.2
UBR4-207ENST00000425413 COX7CP15954 63 aa7.55□□□□□ -1.2
UBR4-207ENST00000425413 FAM19A1Q7Z5A9 133 aa7.54□□□□□ -1.2
UBR4-207ENST00000425413 ELOF1P60002 83 aaKnown RBP7.54□□□□□ -1.2
UBR4-207ENST00000425413 UBL5Q9BZL1 73 aa7.54□□□□□ -1.2
UBR4-207ENST00000425413 DEFB105AQ8NG35 78 aa7.53□□□□□ -1.2
UBR4-207ENST00000425413 C7orf33Q8WU49 177 aa7.53□□□□□ -1.2
UBR4-207ENST00000425413 FAM19A5Q7Z5A7 132 aaPredicted RBP7.52□□□□□ -1.21
UBR4-207ENST00000425413 DSCR8Q96T75 97 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms