RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 LINC00587B1AMM8 73 aa10.08□□□□□ -0.8
DDR1-234ENST00000424544 TSPEAR-AS2P59090 65 aa10.08□□□□□ -0.8
DDR1-234ENST00000424544 PRR3P79522 188 aaKnown RBP10.08□□□□□ -0.8
DDR1-234ENST00000424544 NDUFA12Q9UI09 145 aa10.08□□□□□ -0.8
DDR1-234ENST00000424544 NMUP48645 174 aa10.07□□□□□ -0.8
DDR1-234ENST00000424544 C10orf25Q5T742 122 aa10.07□□□□□ -0.8
DDR1-234ENST00000424544 SFTA2Q6UW10 78 aa10.07□□□□□ -0.8
DDR1-234ENST00000424544 CARD19Q96LW7 228 aa10.07□□□□□ -0.8
DDR1-234ENST00000424544 MYMXA0A1B0GTQ4 84 aa10.06□□□□□ -0.8
DDR1-234ENST00000424544 SRSF9Q13242 221 aaKnown RBP eCLIP10.06□□□□□ -0.8
DDR1-234ENST00000424544 RNF151Q2KHN1 245 aa10.06□□□□□ -0.8
DDR1-234ENST00000424544 ZNF625Q96I27 306 aaPredicted RBP10.06□□□□□ -0.8
DDR1-234ENST00000424544 LINC01600Q96MT4 127 aa10.06□□□□□ -0.8
DDR1-234ENST00000424544 TRBV30A0A0K0K1B3 111 aa10.05□□□□□ -0.8
DDR1-234ENST00000424544 HERV-K104P63124 156 aa10.05□□□□□ -0.8
DDR1-234ENST00000424544 M0R143 59 aa10.04□□□□□ -0.8
DDR1-234ENST00000424544 C6orf48Q9UBA6 75 aa10.04□□□□□ -0.8
DDR1-234ENST00000424544 PKIGQ9Y2B9 76 aa10.04□□□□□ -0.8
DDR1-234ENST00000424544 PCP2Q8IVA1 136 aa10.03□□□□□ -0.8
DDR1-234ENST00000424544 ZNF815PA8K554 130 aa10.02□□□□□ -0.81
DDR1-234ENST00000424544 PTTG1IPP53801 180 aa10.02□□□□□ -0.81
DDR1-234ENST00000424544 TTTY13Q9BZ97 58 aa10.02□□□□□ -0.81
DDR1-234ENST00000424544 KRTAP10-8P60410 259 aa10.01□□□□□ -0.81
DDR1-234ENST00000424544 C9orf116Q5BN46 136 aaPredicted RBP10.01□□□□□ -0.81
DDR1-234ENST00000424544 C14orf144Q96I85 54 aa10.01□□□□□ -0.81
DDR1-234ENST00000424544 A0A1W2PNN7 141 aa10□□□□□ -0.81
DDR1-234ENST00000424544 COX8AP10176 69 aa10□□□□□ -0.81
DDR1-234ENST00000424544 SPINK6Q6UWN8 80 aa10□□□□□ -0.81
DDR1-234ENST00000424544 ERG28Q9UKR5 140 aa10□□□□□ -0.81
DDR1-234ENST00000424544 A0A0J9YXY3 114 aa9.99□□□□□ -0.81
DDR1-234ENST00000424544 LOC107984640A0A0U1RRK4 108 aa9.99□□□□□ -0.81
DDR1-234ENST00000424544 COX17Q14061 63 aa9.99□□□□□ -0.81
DDR1-234ENST00000424544 MEIG1Q5JSS6 88 aa9.99□□□□□ -0.81
DDR1-234ENST00000424544 SLC25A34Q6PIV7 304 aa9.99□□□□□ -0.81
DDR1-234ENST00000424544 DLEU1O43261 78 aa9.98□□□□□ -0.81
DDR1-234ENST00000424544 TLX1NBP0CAT3 122 aa9.98□□□□□ -0.81
DDR1-234ENST00000424544 PFN2P35080 140 aa9.98□□□□□ -0.81
DDR1-234ENST00000424544 LINC00158P58513 81 aa9.98□□□□□ -0.81
DDR1-234ENST00000424544 CTAG1AP78358 180 aa9.98□□□□□ -0.81
DDR1-234ENST00000424544 Q6ZRP5 223 aa9.98□□□□□ -0.81
DDR1-234ENST00000424544 BOD1L2Q8IYS8 172 aa9.98□□□□□ -0.81
DDR1-234ENST00000424544 NDUFC2-KCTD14E9PQ53 114 aa9.97□□□□□ -0.81
DDR1-234ENST00000424544 GAGE2BQ13066 116 aa9.97□□□□□ -0.81
DDR1-234ENST00000424544 A0A0U1RRA0 63 aa9.96□□□□□ -0.82
DDR1-234ENST00000424544 SMIM13P0DJ93 91 aa9.96□□□□□ -0.82
DDR1-234ENST00000424544 SCGB1D4Q6XE38 83 aa9.96□□□□□ -0.82
DDR1-234ENST00000424544 TIMM17BO60830 172 aa9.94□□□□□ -0.82
DDR1-234ENST00000424544 RPL18AQ02543 176 aaKnown RBP9.94□□□□□ -0.82
DDR1-234ENST00000424544 GAGE2EQ4V326 116 aa9.93□□□□□ -0.82
DDR1-234ENST00000424544 GAGE2DQ9UEU5 116 aa9.93□□□□□ -0.82
DDR1-234ENST00000424544 COL5A1-AS1Q5SY13 56 aa9.92□□□□□ -0.82
DDR1-234ENST00000424544 ADAMTSL4-AS1Q5T5F5 129 aa9.92□□□□□ -0.82
DDR1-234ENST00000424544 REG3GQ6UW15 175 aa9.92□□□□□ -0.82
DDR1-234ENST00000424544 MIR7-3HGQ8N6C7 128 aa9.92□□□□□ -0.82
DDR1-234ENST00000424544 LITAFQ99732 161 aa9.91□□□□□ -0.82
DDR1-234ENST00000424544 PSORS1C2Q9UIG4 136 aa9.91□□□□□ -0.82
DDR1-234ENST00000424544 TMEM238C9JI98 176 aa9.9□□□□□ -0.82
DDR1-234ENST00000424544 SND1-IT1Q9HBX3 110 aa9.9□□□□□ -0.82
DDR1-234ENST00000424544 TP73-AS1Q9UF72 201 aa9.9□□□□□ -0.82
DDR1-234ENST00000424544 RNF213Q63HN8 5207 aa9.89□□□□□ -0.83
DDR1-234ENST00000424544 DAND5Q8N907 189 aa9.89□□□□□ -0.83
DDR1-234ENST00000424544 XAGE1AQ9HD64 81 aa9.89□□□□□ -0.83
DDR1-234ENST00000424544 HIGD1BQ9P298 99 aa9.89□□□□□ -0.83
DDR1-234ENST00000424544 Q6ZVH6 145 aa9.88□□□□□ -0.83
DDR1-234ENST00000424544 PHF5AQ7RTV0 110 aaKnown RBP9.88□□□□□ -0.83
DDR1-234ENST00000424544 SNHG12Q9BXW3 62 aa9.88□□□□□ -0.83
DDR1-234ENST00000424544 C9orf129Q5T035 196 aaKnown RBP9.87□□□□□ -0.83
DDR1-234ENST00000424544 KRTAP7-1Q8IUC3 87 aa9.87□□□□□ -0.83
DDR1-234ENST00000424544 SPANXDQ9BXN6 97 aa9.87□□□□□ -0.83
DDR1-234ENST00000424544 SPANXB1Q9NS25 103 aaPredicted RBP9.87□□□□□ -0.83
DDR1-234ENST00000424544 SPANXCQ9NY87 97 aa9.87□□□□□ -0.83
DDR1-234ENST00000424544 LPAP08519 4548 aa9.86□□□□□ -0.83
DDR1-234ENST00000424544 C2orf91Q6ZV80 131 aa9.86□□□□□ -0.83
DDR1-234ENST00000424544 KRTAP11-1Q8IUC1 163 aa9.86□□□□□ -0.83
DDR1-234ENST00000424544 LOC107984156A0A0G2JMH3 177 aa9.85□□□□□ -0.83
DDR1-234ENST00000424544 IFITM1P13164 125 aa9.85□□□□□ -0.83
DDR1-234ENST00000424544 ARL17AQ8IVW1 177 aa9.85□□□□□ -0.83
DDR1-234ENST00000424544 LINC00308Q8TCZ7 52 aa9.85□□□□□ -0.83
DDR1-234ENST00000424544 FAM168BA1KXE4 195 aa9.84□□□□□ -0.83
DDR1-234ENST00000424544 NPC2P61916 151 aa9.84□□□□□ -0.83
DDR1-234ENST00000424544 COPS9Q8WXC6 57 aa9.84□□□□□ -0.83
DDR1-234ENST00000424544 C1orf137Q5JT78 98 aa9.83□□□□□ -0.84
DDR1-234ENST00000424544 SOSTDC1Q6X4U4 206 aa9.83□□□□□ -0.84
DDR1-234ENST00000424544 MUSTN1Q8IVN3 82 aa9.83□□□□□ -0.84
DDR1-234ENST00000424544 HIST1H4GQ99525 98 aa9.83□□□□□ -0.84
DDR1-234ENST00000424544 A6NDN8 102 aa9.82□□□□□ -0.84
DDR1-234ENST00000424544 IGLV7-43P04211 117 aa9.82□□□□□ -0.84
DDR1-234ENST00000424544 RPL24P83731 157 aaKnown RBP9.82□□□□□ -0.84
DDR1-234ENST00000424544 HSD52Q0P140 79 aa9.82□□□□□ -0.84
DDR1-234ENST00000424544 TAL2Q16559 108 aa9.82□□□□□ -0.84
DDR1-234ENST00000424544 EIF4EBP3O60516 100 aaPredicted RBP9.81□□□□□ -0.84
DDR1-234ENST00000424544 BATFQ16520 125 aa9.81□□□□□ -0.84
DDR1-234ENST00000424544 PPDPFQ9H3Y8 114 aa9.81□□□□□ -0.84
DDR1-234ENST00000424544 NDUFC2O95298 119 aa9.78□□□□□ -0.84
DDR1-234ENST00000424544 VPREB1P12018 145 aa9.78□□□□□ -0.84
DDR1-234ENST00000424544 HINT1P49773 126 aaPredicted RBP9.78□□□□□ -0.84
DDR1-234ENST00000424544 FAM19A5Q7Z5A7 132 aaPredicted RBP9.78□□□□□ -0.84
DDR1-234ENST00000424544 C22orf24Q9Y442 160 aa9.78□□□□□ -0.84
DDR1-234ENST00000424544 IGLV5-37A0A075B6J1 123 aa9.77□□□□□ -0.85
DDR1-234ENST00000424544 Q8NDZ9 215 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 576.3 ms