RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 J3QQQ9 107 aa7.36□□□□□ -1.23
LMO3-206ENST00000424192 LGALS3P17931 250 aaKnown RBP7.36□□□□□ -1.23
LMO3-206ENST00000424192 HIST1H2BLQ99880 126 aa7.36□□□□□ -1.23
LMO3-206ENST00000424192 FAT1Q14517 4588 aa7.36□□□□□ -1.23
LMO3-206ENST00000424192 MEIG1Q5JSS6 88 aa7.35□□□□□ -1.23
LMO3-206ENST00000424192 C9orf129Q5T035 196 aaKnown RBP7.35□□□□□ -1.23
LMO3-206ENST00000424192 FAM19A5Q7Z5A7 132 aaPredicted RBP7.35□□□□□ -1.23
LMO3-206ENST00000424192 A0A1W2PNN7 141 aa7.34□□□□□ -1.23
LMO3-206ENST00000424192 M0QXV9 152 aa7.34□□□□□ -1.23
LMO3-206ENST00000424192 PFN2P35080 140 aa7.34□□□□□ -1.23
LMO3-206ENST00000424192 XAGE1AQ9HD64 81 aa7.34□□□□□ -1.23
LMO3-206ENST00000424192 TP73-AS1Q9UF72 201 aa7.34□□□□□ -1.23
LMO3-206ENST00000424192 SNRPEP62304 92 aaKnown RBP7.33□□□□□ -1.24
LMO3-206ENST00000424192 KRTAP19-4Q3LI73 84 aa7.33□□□□□ -1.24
LMO3-206ENST00000424192 LBHQ53QV2 105 aaPredicted RBP7.33□□□□□ -1.24
LMO3-206ENST00000424192 TMA7Q9Y2S6 64 aaKnown RBP7.33□□□□□ -1.24
LMO3-206ENST00000424192 LINC00158P58513 81 aa7.32□□□□□ -1.24
LMO3-206ENST00000424192 TSPEAR-AS2P59090 65 aa7.32□□□□□ -1.24
LMO3-206ENST00000424192 IGLV5-37A0A075B6J1 123 aa7.31□□□□□ -1.24
LMO3-206ENST00000424192 FAM168BA1KXE4 195 aa7.31□□□□□ -1.24
LMO3-206ENST00000424192 C5orf52A6NGY3 159 aa7.31□□□□□ -1.24
LMO3-206ENST00000424192 UBE2BP63146 152 aa7.31□□□□□ -1.24
LMO3-206ENST00000424192 PRR3P79522 188 aaKnown RBP7.31□□□□□ -1.24
LMO3-206ENST00000424192 RPL24P83731 157 aaKnown RBP7.31□□□□□ -1.24
LMO3-206ENST00000424192 NKAPP1Q8N9T2 125 aa7.31□□□□□ -1.24
LMO3-206ENST00000424192 SND1-IT1Q9HBX3 110 aa7.31□□□□□ -1.24
LMO3-206ENST00000424192 ABCA13Q86UQ4 5058 aa7.31□□□□□ -1.24
LMO3-206ENST00000424192 SRRM2Q9UQ35 2752 aaKnown RBP7.3□□□□□ -1.24
LMO3-206ENST00000424192 INAFM2P0DMQ5 153 aa7.3□□□□□ -1.24
LMO3-206ENST00000424192 PHF5AQ7RTV0 110 aaKnown RBP7.3□□□□□ -1.24
LMO3-206ENST00000424192 PCLOQ9Y6V0 5065 aa7.29□□□□□ -1.24
LMO3-206ENST00000424192 SMIM13P0DJ93 91 aa7.29□□□□□ -1.24
LMO3-206ENST00000424192 KRTAP10-4P60372 401 aaPredicted RBP7.29□□□□□ -1.24
LMO3-206ENST00000424192 SERTAD4-AS1Q5TG53 156 aa7.29□□□□□ -1.24
LMO3-206ENST00000424192 MRPL55Q7Z7F7 128 aaKnown RBP7.29□□□□□ -1.24
LMO3-206ENST00000424192 KRTAP17-1Q9BYP8 105 aa7.29□□□□□ -1.24
LMO3-206ENST00000424192 KRTAP4-5Q9BYR2 181 aa7.29□□□□□ -1.24
LMO3-206ENST00000424192 HSBP1L1C9JCN9 74 aa7.28□□□□□ -1.24
LMO3-206ENST00000424192 MIR7-3HGQ8N6C7 128 aa7.28□□□□□ -1.24
LMO3-206ENST00000424192 MIEN1Q9BRT3 115 aa7.28□□□□□ -1.24
LMO3-206ENST00000424192 KRTAP9-9Q9BYP9 154 aa7.28□□□□□ -1.24
LMO3-206ENST00000424192 KRTAP9-4Q9BYQ2 154 aa7.28□□□□□ -1.24
LMO3-206ENST00000424192 C22orf24Q9Y442 160 aa7.28□□□□□ -1.24
LMO3-206ENST00000424192 ZNF815PA8K554 130 aa7.27□□□□□ -1.25
LMO3-206ENST00000424192 TIMM17BO60830 172 aa7.27□□□□□ -1.25
LMO3-206ENST00000424192 A0A0U1RRA0 63 aa7.26□□□□□ -1.25
LMO3-206ENST00000424192 VPREB1P12018 145 aa7.26□□□□□ -1.25
LMO3-206ENST00000424192 KRTAP7-1Q8IUC3 87 aa7.26□□□□□ -1.25
LMO3-206ENST00000424192 PSORS1C2Q9UIG4 136 aa7.26□□□□□ -1.25
LMO3-206ENST00000424192 A0A0J9YXY3 114 aa7.25□□□□□ -1.25
LMO3-206ENST00000424192 ATOH7Q8N100 152 aa7.25□□□□□ -1.25
LMO3-206ENST00000424192 IGKV2D-26A0A0A0MRZ7 120 aa7.24□□□□□ -1.25
LMO3-206ENST00000424192 LOC107984156A0A0G2JMH3 177 aa7.24□□□□□ -1.25
LMO3-206ENST00000424192 C1orf137Q5JT78 98 aa7.24□□□□□ -1.25
LMO3-206ENST00000424192 ARL17AQ8IVW1 177 aa7.24□□□□□ -1.25
LMO3-206ENST00000424192 BOD1L2Q8IYS8 172 aa7.24□□□□□ -1.25
LMO3-206ENST00000424192 COPS9Q8WXC6 57 aa7.24□□□□□ -1.25
LMO3-206ENST00000424192 TMEM238C9JI98 176 aa7.23□□□□□ -1.25
LMO3-206ENST00000424192 SCGB1D1O95968 90 aa7.23□□□□□ -1.25
LMO3-206ENST00000424192 SPINK6Q6UWN8 80 aa7.23□□□□□ -1.25
LMO3-206ENST00000424192 SCGB1D4Q6XE38 83 aa7.23□□□□□ -1.25
LMO3-206ENST00000424192 M0R378 163 aa7.22□□□□□ -1.25
LMO3-206ENST00000424192 S100A12P80511 92 aa7.22□□□□□ -1.25
LMO3-206ENST00000424192 LINC00167Q96N53 147 aa7.22□□□□□ -1.25
LMO3-206ENST00000424192 PKHD1L1Q86WI1 4243 aa7.22□□□□□ -1.25
LMO3-206ENST00000424192 TRBV10-2A0A0K0K1G8 114 aa7.21□□□□□ -1.26
LMO3-206ENST00000424192 NDUFC2O95298 119 aa7.21□□□□□ -1.26
LMO3-206ENST00000424192 IGLV7-43P04211 117 aa7.21□□□□□ -1.26
LMO3-206ENST00000424192 SPANXB1Q9NS25 103 aaPredicted RBP7.21□□□□□ -1.26
LMO3-206ENST00000424192 GAGE10A6NGK3 116 aa7.2□□□□□ -1.26
LMO3-206ENST00000424192 REG3GQ6UW15 175 aa7.2□□□□□ -1.26
LMO3-206ENST00000424192 Q6ZVH6 145 aa7.2□□□□□ -1.26
LMO3-206ENST00000424192 DAND5Q8N907 189 aa7.2□□□□□ -1.26
LMO3-206ENST00000424192 CBY1Q9Y3M2 126 aa7.2□□□□□ -1.26
LMO3-206ENST00000424192 IGLV1-50A0A075B6I6 118 aa7.19□□□□□ -1.26
LMO3-206ENST00000424192 BCE1O60756 84 aa7.19□□□□□ -1.26
LMO3-206ENST00000424192 OXTP01178 125 aa7.19□□□□□ -1.26
LMO3-206ENST00000424192 HNRNPA3P51991 378 aaKnown RBP7.19□□□□□ -1.26
LMO3-206ENST00000424192 LCE4AQ5TA78 99 aa7.19□□□□□ -1.26
LMO3-206ENST00000424192 DIRC1Q969H9 104 aa7.19□□□□□ -1.26
LMO3-206ENST00000424192 LITAFQ99732 161 aa7.19□□□□□ -1.26
LMO3-206ENST00000424192 SPANXDQ9BXN6 97 aa7.19□□□□□ -1.26
LMO3-206ENST00000424192 PPDPFQ9H3Y8 114 aa7.19□□□□□ -1.26
LMO3-206ENST00000424192 SPANXCQ9NY87 97 aa7.19□□□□□ -1.26
LMO3-206ENST00000424192 IGKV2-28A0A075B6P5 120 aa7.18□□□□□ -1.26
LMO3-206ENST00000424192 C9orf118A6NHY6 69 aa7.18□□□□□ -1.26
LMO3-206ENST00000424192 RPL37AP8A6NKH3 93 aa7.18□□□□□ -1.26
LMO3-206ENST00000424192 IGKV2D-28P01615 120 aa7.18□□□□□ -1.26
LMO3-206ENST00000424192 IFITM1P13164 125 aa7.18□□□□□ -1.26
LMO3-206ENST00000424192 RPL28P46779 137 aaKnown RBP7.18□□□□□ -1.26
LMO3-206ENST00000424192 TTTY13Q9BZ97 58 aa7.18□□□□□ -1.26
LMO3-206ENST00000424192 MYCBP2O75592 4640 aa7.17□□□□□ -1.26
LMO3-206ENST00000424192 KRTAP29-1A8MX34 341 aaPredicted RBP7.17□□□□□ -1.26
LMO3-206ENST00000424192 PRYO14603 147 aa7.17□□□□□ -1.26
LMO3-206ENST00000424192 NCR3O14931 201 aa7.17□□□□□ -1.26
LMO3-206ENST00000424192 SRSF9Q13242 221 aaKnown RBP eCLIP7.17□□□□□ -1.26
LMO3-206ENST00000424192 JOSD1Q15040 202 aaPredicted RBP7.17□□□□□ -1.26
LMO3-206ENST00000424192 ADAMTSL4-AS1Q5T5F5 129 aa7.17□□□□□ -1.26
LMO3-206ENST00000424192 KRTAP11-1Q8IUC1 163 aa7.17□□□□□ -1.26
LMO3-206ENST00000424192 PCP2Q8IVA1 136 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms