RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 CYSLTR1Q9Y271 337 aa4.7□□□□□ -1.66
VIM-202ENST00000421459 F8VRH5 84 aa4.69□□□□□ -1.66
VIM-202ENST00000421459 LEPROTL1O95214 131 aa4.69□□□□□ -1.66
VIM-202ENST00000421459 FAM19A3Q7Z5A8 133 aa4.69□□□□□ -1.66
VIM-202ENST00000421459 KRTAP13-1Q8IUC0 172 aa4.69□□□□□ -1.66
VIM-202ENST00000421459 TP73-AS1Q9UF72 201 aa4.69□□□□□ -1.66
VIM-202ENST00000421459 HSPB8Q9UJY1 196 aa4.69□□□□□ -1.66
VIM-202ENST00000421459 IGKV2-28A0A075B6P5 120 aa4.68□□□□□ -1.66
VIM-202ENST00000421459 ATP5LO75964 103 aa4.68□□□□□ -1.66
VIM-202ENST00000421459 IGKV2D-28P01615 120 aa4.68□□□□□ -1.66
VIM-202ENST00000421459 C3orf79P0CE67 100 aa4.68□□□□□ -1.66
VIM-202ENST00000421459 JOSD1Q15040 202 aaPredicted RBP4.68□□□□□ -1.66
VIM-202ENST00000421459 CDIP1Q9H305 208 aa4.68□□□□□ -1.66
VIM-202ENST00000421459 IGLV7-46A0A075B6I9 117 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 SMIM1B2RUZ4 78 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 SYS1-DBNDD2H3BUS1 97 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 NPSP0C0P6 89 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 SMIM6P0DI80 62 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 UBE2AP49459 152 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 AKR1D1P51857 326 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 HERVK_113P63121 156 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 PRLHP81277 87 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 PYY3Q5JQD4 70 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 ERASQ7Z444 233 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 LINC00304Q8N9R0 145 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 TIMM17AQ99595 171 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 GEMIN7Q9H840 131 aaKnown RBP4.67□□□□□ -1.66
VIM-202ENST00000421459 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
VIM-202ENST00000421459 SPINK8P0C7L1 97 aa4.66□□□□□ -1.66
VIM-202ENST00000421459 KRTDAPP60985 99 aa4.66□□□□□ -1.66
VIM-202ENST00000421459 PET117Q6UWS5 81 aa4.66□□□□□ -1.66
VIM-202ENST00000421459 C3orf22Q8N5N4 141 aa4.66□□□□□ -1.66
VIM-202ENST00000421459 COX7B2Q8TF08 81 aa4.66□□□□□ -1.66
VIM-202ENST00000421459 IFI27L1Q96BM0 104 aa4.66□□□□□ -1.66
VIM-202ENST00000421459 SCGB3A1Q96QR1 104 aa4.66□□□□□ -1.66
VIM-202ENST00000421459 MAP1LC3CQ9BXW4 147 aa4.66□□□□□ -1.66
VIM-202ENST00000421459 TRAV12-1A0A0B4J245 112 aa4.65□□□□□ -1.67
VIM-202ENST00000421459 TMEM238C9JI98 176 aa4.65□□□□□ -1.67
VIM-202ENST00000421459 LINC01545Q5VT33 79 aa4.65□□□□□ -1.67
VIM-202ENST00000421459 IGLV5-37A0A075B6J1 123 aa4.64□□□□□ -1.67
VIM-202ENST00000421459 IGKV2D-26A0A0A0MRZ7 120 aa4.64□□□□□ -1.67
VIM-202ENST00000421459 PFN2P35080 140 aa4.64□□□□□ -1.67
VIM-202ENST00000421459 TPRXLQ17RH7 258 aa4.64□□□□□ -1.67
VIM-202ENST00000421459 FAM19A1Q7Z5A9 133 aa4.64□□□□□ -1.67
VIM-202ENST00000421459 LINC00518Q8N0U6 118 aa4.64□□□□□ -1.67
VIM-202ENST00000421459 NKAPP1Q8N9T2 125 aa4.64□□□□□ -1.67
VIM-202ENST00000421459 Q8NDZ9 215 aa4.64□□□□□ -1.67
VIM-202ENST00000421459 PPDPFQ9H3Y8 114 aa4.64□□□□□ -1.67
VIM-202ENST00000421459 TINCRA0A1B0GVN0 87 aa4.63□□□□□ -1.67
VIM-202ENST00000421459 C20orf202A1L168 122 aa4.63□□□□□ -1.67
VIM-202ENST00000421459 CXCL5P42830 114 aa4.63□□□□□ -1.67
VIM-202ENST00000421459 SEC11AP67812 179 aa4.63□□□□□ -1.67
VIM-202ENST00000421459 PMVKQ15126 192 aa4.63□□□□□ -1.67
VIM-202ENST00000421459 FAM229BQ4G0N7 80 aa4.63□□□□□ -1.67
VIM-202ENST00000421459 PAPPA-AS1Q5QFB9 102 aa4.63□□□□□ -1.67
VIM-202ENST00000421459 KRTAP4-1Q9BYQ7 146 aa4.63□□□□□ -1.67
VIM-202ENST00000421459 CST9LQ9H4G1 147 aa4.63□□□□□ -1.67
VIM-202ENST00000421459 IGLV5-45A0A087WSX0 123 aa4.62□□□□□ -1.67
VIM-202ENST00000421459 M0R378 163 aa4.62□□□□□ -1.67
VIM-202ENST00000421459 SCGB1D1O95968 90 aa4.62□□□□□ -1.67
VIM-202ENST00000421459 VPREB1P12018 145 aa4.62□□□□□ -1.67
VIM-202ENST00000421459 PLEKHB2Q96CS7 222 aa4.62□□□□□ -1.67
VIM-202ENST00000421459 TMEM126AQ9H061 195 aa4.62□□□□□ -1.67
VIM-202ENST00000421459 PLNP26678 52 aa4.61□□□□□ -1.67
VIM-202ENST00000421459 ZNF625Q96I27 306 aaPredicted RBP4.61□□□□□ -1.67
VIM-202ENST00000421459 C12orf57Q99622 126 aa4.61□□□□□ -1.67
VIM-202ENST00000421459 SND1-IT1Q9HBX3 110 aa4.61□□□□□ -1.67
VIM-202ENST00000421459 H0Y8G0 127 aa4.6□□□□□ -1.67
VIM-202ENST00000421459 DPM2O94777 84 aa4.6□□□□□ -1.67
VIM-202ENST00000421459 IGLC3P0DOY3 106 aa4.6□□□□□ -1.67
VIM-202ENST00000421459 DAND5Q8N907 189 aa4.6□□□□□ -1.67
VIM-202ENST00000421459 CHTOPQ9Y3Y2 248 aaKnown RBP4.6□□□□□ -1.67
VIM-202ENST00000421459 IGKCP01834 107 aa4.59□□□□□ -1.67
VIM-202ENST00000421459 PMCHL2Q9BQD1 86 aa4.59□□□□□ -1.67
VIM-202ENST00000421459 HIGD2AQ9BW72 106 aa4.59□□□□□ -1.67
VIM-202ENST00000421459 C11orf86A6NJI1 115 aa4.58□□□□□ -1.68
VIM-202ENST00000421459 S100A12P80511 92 aa4.58□□□□□ -1.68
VIM-202ENST00000421459 KRTAP13-3Q3SY46 172 aa4.58□□□□□ -1.68
VIM-202ENST00000421459 ATOH7Q8N100 152 aa4.58□□□□□ -1.68
VIM-202ENST00000421459 VAMP8Q9BV40 100 aa4.58□□□□□ -1.68
VIM-202ENST00000421459 ERG28Q9UKR5 140 aa4.58□□□□□ -1.68
VIM-202ENST00000421459 IGLV5-39A0A0G2JS06 123 aa4.57□□□□□ -1.68
VIM-202ENST00000421459 A0A0U1RRA0 63 aa4.57□□□□□ -1.68
VIM-202ENST00000421459 LCE2BO14633 110 aa4.57□□□□□ -1.68
VIM-202ENST00000421459 ZNF22P17026 224 aaPredicted RBP4.57□□□□□ -1.68
VIM-202ENST00000421459 SPRR4Q96PI1 79 aa4.57□□□□□ -1.68
VIM-202ENST00000421459 H3BRM9 83 aa4.56□□□□□ -1.68
VIM-202ENST00000421459 ANKRD39Q53RE8 183 aa4.56□□□□□ -1.68
VIM-202ENST00000421459 LINC00337Q8N6G1 96 aa4.56□□□□□ -1.68
VIM-202ENST00000421459 Q8NBF4 154 aa4.56□□□□□ -1.68
VIM-202ENST00000421459 PAM16Q9Y3D7 125 aa4.56□□□□□ -1.68
VIM-202ENST00000421459 TMEM223A0PJW6 202 aa4.55□□□□□ -1.68
VIM-202ENST00000421459 HSBP1L1C9JCN9 74 aa4.55□□□□□ -1.68
VIM-202ENST00000421459 RPL24P83731 157 aaKnown RBP4.55□□□□□ -1.68
VIM-202ENST00000421459 ASB16-AS1Q495Z4 193 aa4.55□□□□□ -1.68
VIM-202ENST00000421459 SPATA45Q537H7 98 aa4.55□□□□□ -1.68
VIM-202ENST00000421459 SPAG11AQ6PDA7 123 aa4.55□□□□□ -1.68
VIM-202ENST00000421459 E9PLD3 99 aa4.54□□□□□ -1.68
VIM-202ENST00000421459 LINC01547P58512 204 aaPredicted RBP4.54□□□□□ -1.68
VIM-202ENST00000421459 LINC00158P58513 81 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms