RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 ATP5LO75964 103 aa4.57□□□□□ -1.68
TRIM39-206ENST00000420746 IFITM3Q01628 133 aa4.57□□□□□ -1.68
TRIM39-206ENST00000420746 C9orf153Q5TBE3 101 aa4.57□□□□□ -1.68
TRIM39-206ENST00000420746 ZC2HC1BQ5TFG8 222 aa4.57□□□□□ -1.68
TRIM39-206ENST00000420746 Q8NDZ9 215 aa4.57□□□□□ -1.68
TRIM39-206ENST00000420746 LGALS3P17931 250 aaKnown RBP4.56□□□□□ -1.68
TRIM39-206ENST00000420746 TAGLN2P37802 199 aaKnown RBP4.56□□□□□ -1.68
TRIM39-206ENST00000420746 RAB14P61106 215 aa4.56□□□□□ -1.68
TRIM39-206ENST00000420746 COX17Q14061 63 aa4.56□□□□□ -1.68
TRIM39-206ENST00000420746 KIAA1644Q3SXP7 199 aa4.56□□□□□ -1.68
TRIM39-206ENST00000420746 ETDCA0A1B0GVM5 59 aa4.55□□□□□ -1.68
TRIM39-206ENST00000420746 ARPC5O15511 151 aa4.55□□□□□ -1.68
TRIM39-206ENST00000420746 NPYP01303 97 aa4.55□□□□□ -1.68
TRIM39-206ENST00000420746 PFN2P35080 140 aa4.55□□□□□ -1.68
TRIM39-206ENST00000420746 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
TRIM39-206ENST00000420746 PAPPA-AS1Q5QFB9 102 aa4.55□□□□□ -1.68
TRIM39-206ENST00000420746 KCNQ1DNQ9H478 68 aa4.55□□□□□ -1.68
TRIM39-206ENST00000420746 CYSLTR1Q9Y271 337 aa4.55□□□□□ -1.68
TRIM39-206ENST00000420746 MDN1Q9NU22 5596 aa4.55□□□□□ -1.68
TRIM39-206ENST00000420746 IGLV5-45A0A087WSX0 123 aa4.54□□□□□ -1.68
TRIM39-206ENST00000420746 PRSS47A8MTI9 375 aa4.54□□□□□ -1.68
TRIM39-206ENST00000420746 D6R8Y8 96 aa4.54□□□□□ -1.68
TRIM39-206ENST00000420746 PPBPP02775 128 aa4.54□□□□□ -1.68
TRIM39-206ENST00000420746 ZNF345Q14585 488 aa4.54□□□□□ -1.68
TRIM39-206ENST00000420746 KMT2DO14686 5537 aa4.54□□□□□ -1.68
TRIM39-206ENST00000420746 A0A1B0GW15 77 aa4.53□□□□□ -1.68
TRIM39-206ENST00000420746 IGIPA6NJ69 53 aa4.53□□□□□ -1.68
TRIM39-206ENST00000420746 ERC2-IT1O76042 136 aa4.53□□□□□ -1.68
TRIM39-206ENST00000420746 TRAV9-1A0A075B6T8 112 aa4.52□□□□□ -1.69
TRIM39-206ENST00000420746 Q5XG85 94 aa4.52□□□□□ -1.69
TRIM39-206ENST00000420746 OSTCQ9NRP0 149 aa4.52□□□□□ -1.69
TRIM39-206ENST00000420746 ERG28Q9UKR5 140 aa4.52□□□□□ -1.69
TRIM39-206ENST00000420746 TINCRA0A1B0GVN0 87 aa4.51□□□□□ -1.69
TRIM39-206ENST00000420746 TMEM250H0YL14 139 aa4.51□□□□□ -1.69
TRIM39-206ENST00000420746 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
TRIM39-206ENST00000420746 ATP11AUNQ6ZP68 121 aa4.51□□□□□ -1.69
TRIM39-206ENST00000420746 NAT8BQ9UHF3 227 aa4.51□□□□□ -1.69
TRIM39-206ENST00000420746 TRBV20-1A0A075B6N2 111 aa4.5□□□□□ -1.69
TRIM39-206ENST00000420746 B5MCH6 92 aa4.5□□□□□ -1.69
TRIM39-206ENST00000420746 CD164Q04900 197 aa4.5□□□□□ -1.69
TRIM39-206ENST00000420746 C6orf99Q4VX62 202 aa4.5□□□□□ -1.69
TRIM39-206ENST00000420746 CHTOPQ9Y3Y2 248 aaKnown RBP4.5□□□□□ -1.69
TRIM39-206ENST00000420746 LOC389332A0A1B0GUA5 103 aa4.49□□□□□ -1.69
TRIM39-206ENST00000420746 C9orf118A6NHY6 69 aa4.49□□□□□ -1.69
TRIM39-206ENST00000420746 HMSDA8MTL9 139 aa4.49□□□□□ -1.69
TRIM39-206ENST00000420746 F8W036 122 aa4.49□□□□□ -1.69
TRIM39-206ENST00000420746 ORMDL2Q53FV1 153 aa4.49□□□□□ -1.69
TRIM39-206ENST00000420746 C1orf195Q5TG92 126 aa4.49□□□□□ -1.69
TRIM39-206ENST00000420746 HRCT1Q6UXD1 115 aa4.49□□□□□ -1.69
TRIM39-206ENST00000420746 ORMDL3Q8N138 153 aa4.49□□□□□ -1.69
TRIM39-206ENST00000420746 C20orf166-AS1Q96NR2 134 aa4.49□□□□□ -1.69
TRIM39-206ENST00000420746 C5orf52A6NGY3 159 aa4.48□□□□□ -1.69
TRIM39-206ENST00000420746 K7EMI3 77 aa4.48□□□□□ -1.69
TRIM39-206ENST00000420746 S100A8P05109 93 aa4.48□□□□□ -1.69
TRIM39-206ENST00000420746 SPINK8P0C7L1 97 aa4.48□□□□□ -1.69
TRIM39-206ENST00000420746 S100A12P80511 92 aa4.48□□□□□ -1.69
TRIM39-206ENST00000420746 FAM74A3Q4VXF1 159 aa4.48□□□□□ -1.69
TRIM39-206ENST00000420746 C10orf91Q5T1B1 145 aa4.48□□□□□ -1.69
TRIM39-206ENST00000420746 Q75L30 129 aa4.48□□□□□ -1.69
TRIM39-206ENST00000420746 Q9BRP9 147 aa4.48□□□□□ -1.69
TRIM39-206ENST00000420746 V9GYV3 84 aa4.48□□□□□ -1.69
TRIM39-206ENST00000420746 KANTRA0A1W2PQU2 76 aa4.47□□□□□ -1.69
TRIM39-206ENST00000420746 LCE3BQ5TA77 95 aa4.47□□□□□ -1.69
TRIM39-206ENST00000420746 SFTA2Q6UW10 78 aa4.47□□□□□ -1.69
TRIM39-206ENST00000420746 Q6ZRX8 168 aa4.47□□□□□ -1.69
TRIM39-206ENST00000420746 BATF3Q9NR55 127 aa4.47□□□□□ -1.69
TRIM39-206ENST00000420746 NDUFA13Q9P0J0 144 aa4.47□□□□□ -1.69
TRIM39-206ENST00000420746 LAMTOR2Q9Y2Q5 125 aa4.47□□□□□ -1.69
TRIM39-206ENST00000420746 IGLV5-39A0A0G2JS06 123 aa4.46□□□□□ -1.7
TRIM39-206ENST00000420746 G0S2P27469 103 aa4.46□□□□□ -1.7
TRIM39-206ENST00000420746 ALKAL2Q6UX46 152 aa4.46□□□□□ -1.7
TRIM39-206ENST00000420746 TMEM136Q6ZRR5 245 aa4.46□□□□□ -1.7
TRIM39-206ENST00000420746 Q8N8P6 123 aa4.46□□□□□ -1.7
TRIM39-206ENST00000420746 PRELID3AQ96N28 172 aa4.46□□□□□ -1.7
TRIM39-206ENST00000420746 H3BRM9 83 aa4.45□□□□□ -1.7
TRIM39-206ENST00000420746 SLC25A34Q6PIV7 304 aa4.45□□□□□ -1.7
TRIM39-206ENST00000420746 MAP1LC3AQ9H492 121 aa4.45□□□□□ -1.7
TRIM39-206ENST00000420746 TRBV10-3A0A0K0K1G6 114 aa4.44□□□□□ -1.7
TRIM39-206ENST00000420746 SMIM27A0A1W2PRY6 76 aa4.44□□□□□ -1.7
TRIM39-206ENST00000420746 SMIM29Q86T20 159 aa4.44□□□□□ -1.7
TRIM39-206ENST00000420746 A0A1B0GXF2 115 aa4.43□□□□□ -1.7
TRIM39-206ENST00000420746 SPRR1BP22528 89 aa4.43□□□□□ -1.7
TRIM39-206ENST00000420746 JOSD1Q15040 202 aaPredicted RBP4.43□□□□□ -1.7
TRIM39-206ENST00000420746 SMIM7Q9BQ49 75 aa4.43□□□□□ -1.7
TRIM39-206ENST00000420746 NCR3O14931 201 aa4.42□□□□□ -1.7
TRIM39-206ENST00000420746 ERASQ7Z444 233 aa4.42□□□□□ -1.7
TRIM39-206ENST00000420746 TOMM6Q96B49 74 aa4.42□□□□□ -1.7
TRIM39-206ENST00000420746 ZNF625Q96I27 306 aaPredicted RBP4.42□□□□□ -1.7
TRIM39-206ENST00000420746 H7C2G1 150 aa4.41□□□□□ -1.7
TRIM39-206ENST00000420746 LINC00158P58513 81 aa4.41□□□□□ -1.7
TRIM39-206ENST00000420746 RPL23P62829 140 aaKnown RBP4.41□□□□□ -1.7
TRIM39-206ENST00000420746 Q1RN00 199 aa4.41□□□□□ -1.7
TRIM39-206ENST00000420746 FAM236DA0A1B0GTK5 79 aa4.4□□□□□ -1.71
TRIM39-206ENST00000420746 FAM236CP0DP71 79 aa4.4□□□□□ -1.71
TRIM39-206ENST00000420746 BOD1L2Q8IYS8 172 aa4.4□□□□□ -1.71
TRIM39-206ENST00000420746 ST20-AS1Q8NBB2 130 aa4.4□□□□□ -1.71
TRIM39-206ENST00000420746 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
TRIM39-206ENST00000420746 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.71
TRIM39-206ENST00000420746 CST9LQ9H4G1 147 aa4.4□□□□□ -1.71
TRIM39-206ENST00000420746 LAMTOR3Q9UHA4 124 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms