RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 ZCCHC13Q8WW36 166 aaKnown RBP2.78□□□□□ -1.96
PTPN22-202ENST00000420377 PRRC2CQ9Y520 2896 aaKnown RBP2.78□□□□□ -1.96
PTPN22-202ENST00000420377 IGHV1OR15-1A0A075B7D0 117 aa2.78□□□□□ -1.96
PTPN22-202ENST00000420377 IGHV3-30-3P0DP02 117 aa2.78□□□□□ -1.96
PTPN22-202ENST00000420377 FAM27BQ5VT28 67 aa2.78□□□□□ -1.96
PTPN22-202ENST00000420377 LINC00167Q96N53 147 aa2.78□□□□□ -1.96
PTPN22-202ENST00000420377 NDUFA4L2Q9NRX3 87 aa2.78□□□□□ -1.96
PTPN22-202ENST00000420377 LOC110117498A0A087WWA1 95 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 IGHV3-72A0A0B4J1Y9 119 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 TRBV6-5A0A0K0K1A5 114 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 NCR3O14931 201 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 ROMO1P60602 79 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 NDPQ00604 133 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 FAM74A4Q5TZK3 123 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 FREM2Q5SZK8 3169 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.77□□□□□ -1.97
PTPN22-202ENST00000420377 IGKV1D-37A0A075B6S9 117 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 LINC00308Q8TCZ7 52 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 HIGD2AQ9BW72 106 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 MXRA5Q9NR99 2828 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 PRR14LQ5THK1 2151 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 ALPK2Q86TB3 2170 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 TFF1P04155 84 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 PDE6GP18545 87 aa2.77□□□□□ -1.97
PTPN22-202ENST00000420377 RYR3Q15413 4870 aa2.76□□□□□ -1.97
PTPN22-202ENST00000420377 IGLV9-49A0A0B4J1Y8 123 aa2.76□□□□□ -1.97
PTPN22-202ENST00000420377 RTL8CO15255 209 aa2.76□□□□□ -1.97
PTPN22-202ENST00000420377 IGHV4-38-2P0DP08 117 aa2.76□□□□□ -1.97
PTPN22-202ENST00000420377 KRTAP10-11P60412 298 aa2.76□□□□□ -1.97
PTPN22-202ENST00000420377 C1orf134Q5TEV5 83 aa2.76□□□□□ -1.97
PTPN22-202ENST00000420377 FAM104AQ969W3 186 aa2.76□□□□□ -1.97
PTPN22-202ENST00000420377 LINC00467Q9BRT7 94 aa2.76□□□□□ -1.97
PTPN22-202ENST00000420377 COL6A5A8TX70 2615 aa2.76□□□□□ -1.97
PTPN22-202ENST00000420377 IGHV3OR16-12A0A075B7B8 117 aa2.76□□□□□ -1.97
PTPN22-202ENST00000420377 TRBV10-1A0A0K0K1A3 114 aa2.76□□□□□ -1.97
PTPN22-202ENST00000420377 MEGF8Q7Z7M0 2845 aa2.75□□□□□ -1.97
PTPN22-202ENST00000420377 KRTAP16-1A8MUX0 517 aa2.75□□□□□ -1.97
PTPN22-202ENST00000420377 NDUFA1O15239 70 aa2.75□□□□□ -1.97
PTPN22-202ENST00000420377 ATP6V0E1O15342 81 aa2.75□□□□□ -1.97
PTPN22-202ENST00000420377 CMC4P56277 68 aaPredicted RBP2.75□□□□□ -1.97
PTPN22-202ENST00000420377 RNASE13Q5GAN3 156 aaKnown RBP2.75□□□□□ -1.97
PTPN22-202ENST00000420377 SUMO4Q6EEV6 95 aa2.75□□□□□ -1.97
PTPN22-202ENST00000420377 SPANXA2-OT1Q8N9U9 137 aa2.75□□□□□ -1.97
PTPN22-202ENST00000420377 PLAC8Q9NZF1 115 aa2.75□□□□□ -1.97
PTPN22-202ENST00000420377 DNAJC13O75165 2243 aa2.75□□□□□ -1.97
PTPN22-202ENST00000420377 A0A087WYN8 130 aa2.75□□□□□ -1.97
PTPN22-202ENST00000420377 ODF3BA8MYP8 253 aa2.75□□□□□ -1.97
PTPN22-202ENST00000420377 Q6ZQT0 140 aa2.75□□□□□ -1.97
PTPN22-202ENST00000420377 CCDC168Q8NDH2 2452 aa2.75□□□□□ -1.97
PTPN22-202ENST00000420377 ZNF407Q9C0G0 2248 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 IGKV2-29A2NJV5 120 aaPredicted RBP2.74□□□□□ -1.97
PTPN22-202ENST00000420377 CRPP02741 224 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 HAMPP81172 84 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 DEFB114Q30KQ6 69 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 ZFAND2AQ8N6M9 145 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 KLK9Q9UKQ9 250 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 ACANP16112 2415 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 RYR2Q92736 4967 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 IGHV4OR15-8A0A075B7B6 117 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 A0A087WW49 117 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 A0A1B0GVY2 172 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 ERHP84090 104 aaKnown RBP2.74□□□□□ -1.97
PTPN22-202ENST00000420377 C4orf3Q8WVX3 66 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 LINC00208Q96KT6 92 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 C11orf21Q9P2W6 132 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 LINC01558Q9Y6Z2 57 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 CENPEQ02224 2701 aa2.74□□□□□ -1.97
PTPN22-202ENST00000420377 IGHV3-73A0A0B4J1V6 119 aa2.73□□□□□ -1.97
PTPN22-202ENST00000420377 IGHV3-35A0A0C4DH35 117 aa2.73□□□□□ -1.97
PTPN22-202ENST00000420377 IGHV7-4-1A0A0J9YVY3 117 aa2.73□□□□□ -1.97
PTPN22-202ENST00000420377 H3BUA1 57 aa2.73□□□□□ -1.97
PTPN22-202ENST00000420377 IGHV4-59P01825 116 aa2.73□□□□□ -1.97
PTPN22-202ENST00000420377 CNBPP62633 177 aaKnown RBP2.73□□□□□ -1.97
PTPN22-202ENST00000420377 ADM2Q7Z4H4 148 aa2.73□□□□□ -1.97
PTPN22-202ENST00000420377 Q8NAQ8 132 aa2.73□□□□□ -1.97
PTPN22-202ENST00000420377 LAMA1P25391 3075 aa2.73□□□□□ -1.97
PTPN22-202ENST00000420377 ABCA1O95477 2261 aa2.73□□□□□ -1.97
PTPN22-202ENST00000420377 JMJD1CQ15652 2540 aa2.73□□□□□ -1.97
PTPN22-202ENST00000420377 IGHV3-48P01763 117 aa2.73□□□□□ -1.97
PTPN22-202ENST00000420377 IGHV1-8P0DP01 117 aa2.73□□□□□ -1.97
PTPN22-202ENST00000420377 POLR2KP53803 58 aaKnown RBP2.73□□□□□ -1.97
PTPN22-202ENST00000420377 NIPBLQ6KC79 2804 aaeCLIP2.73□□□□□ -1.97
PTPN22-202ENST00000420377 MALRD1Q5VYJ5 2156 aa2.72□□□□□ -1.97
PTPN22-202ENST00000420377 H3BQ85 93 aa2.72□□□□□ -1.97
PTPN22-202ENST00000420377 LECT2O14960 151 aa2.72□□□□□ -1.97
PTPN22-202ENST00000420377 CGB3P0DN86 165 aa2.72□□□□□ -1.97
PTPN22-202ENST00000420377 CGB7P0DN87 165 aa2.72□□□□□ -1.97
PTPN22-202ENST00000420377 Q8NDZ9 215 aa2.72□□□□□ -1.97
PTPN22-202ENST00000420377 IGHV3OR16-8A0A075B7F1 116 aa2.72□□□□□ -1.97
PTPN22-202ENST00000420377 FGF23Q9GZV9 251 aaPredicted RBP2.72□□□□□ -1.97
PTPN22-202ENST00000420377 SPENQ96T58 3664 aaKnown RBP2.71□□□□□ -1.97
PTPN22-202ENST00000420377 IGHV3-64A0A075B6Q5 118 aa2.71□□□□□ -1.98
PTPN22-202ENST00000420377 IGHV3-49A0A0A0MS15 119 aa2.71□□□□□ -1.98
PTPN22-202ENST00000420377 A0A1W2PNM2 257 aa2.71□□□□□ -1.98
PTPN22-202ENST00000420377 H3BRN7 92 aa2.71□□□□□ -1.98
PTPN22-202ENST00000420377 Q6ZTI0 123 aa2.71□□□□□ -1.98
PTPN22-202ENST00000420377 COL12A1Q99715 3063 aa2.71□□□□□ -1.98
PTPN22-202ENST00000420377 IGLV1-47P01700 117 aa2.71□□□□□ -1.98
PTPN22-202ENST00000420377 NNATQ16517 81 aa2.71□□□□□ -1.98
PTPN22-202ENST00000420377 RPL39LQ96EH5 51 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms