RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 M0R378 163 aa5.68□□□□□ -1.5
RAPGEF1-205ENST00000419442 NPSP0C0P6 89 aa5.68□□□□□ -1.5
RAPGEF1-205ENST00000419442 S100PP25815 95 aa5.68□□□□□ -1.5
RAPGEF1-205ENST00000419442 CXCL5P42830 114 aa5.68□□□□□ -1.5
RAPGEF1-205ENST00000419442 AKR1D1P51857 326 aa5.68□□□□□ -1.5
RAPGEF1-205ENST00000419442 COA6Q5JTJ3 125 aaKnown RBP5.68□□□□□ -1.5
RAPGEF1-205ENST00000419442 FAM104BQ5XKR9 115 aa5.68□□□□□ -1.5
RAPGEF1-205ENST00000419442 FAM19A3Q7Z5A8 133 aa5.68□□□□□ -1.5
RAPGEF1-205ENST00000419442 TMEM141Q96I45 108 aa5.68□□□□□ -1.5
RAPGEF1-205ENST00000419442 SLC25A20O43772 301 aa5.67□□□□□ -1.5
RAPGEF1-205ENST00000419442 FABP9Q0Z7S8 132 aa5.67□□□□□ -1.5
RAPGEF1-205ENST00000419442 RIGQ13278 110 aa5.67□□□□□ -1.5
RAPGEF1-205ENST00000419442 PRYO14603 147 aa5.66□□□□□ -1.5
RAPGEF1-205ENST00000419442 TEX43Q6ZNM6 134 aa5.66□□□□□ -1.5
RAPGEF1-205ENST00000419442 AMELXQ99217 191 aa5.66□□□□□ -1.5
RAPGEF1-205ENST00000419442 SMIM7Q9BQ49 75 aa5.66□□□□□ -1.5
RAPGEF1-205ENST00000419442 HIGD2AQ9BW72 106 aa5.66□□□□□ -1.5
RAPGEF1-205ENST00000419442 HIST1H2BKO60814 126 aa5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 HIST1H2BJP06899 126 aa5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 CFC1P0CG37 223 aa5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 HIST1H2BOP23527 126 aa5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 HIST1H2BBP33778 126 aa5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 HIST1H2BDP58876 126 aa5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 HIST1H2BCP62807 126 aa5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 RPL23P62829 140 aaKnown RBP5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 HIST2H2BEQ16778 126 aa5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 HIST1H2BHQ93079 126 aa5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 HIST1H2BNQ99877 126 aa5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 HIST1H2BMQ99879 126 aa5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 C2orf88Q9BSF0 95 aa5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 GEMIN7Q9H840 131 aaKnown RBP5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 ZNF706Q9Y5V0 76 aaPredicted RBP5.65□□□□□ -1.5
RAPGEF1-205ENST00000419442 VPREB1P12018 145 aa5.64□□□□□ -1.51
RAPGEF1-205ENST00000419442 CKS2P33552 79 aa5.64□□□□□ -1.51
RAPGEF1-205ENST00000419442 ZC2HC1BQ5TFG8 222 aa5.64□□□□□ -1.51
RAPGEF1-205ENST00000419442 COX6B2Q6YFQ2 88 aa5.64□□□□□ -1.51
RAPGEF1-205ENST00000419442 NPYP01303 97 aa5.63□□□□□ -1.51
RAPGEF1-205ENST00000419442 S100A2P29034 98 aa5.63□□□□□ -1.51
RAPGEF1-205ENST00000419442 COX19Q49B96 90 aa5.63□□□□□ -1.51
RAPGEF1-205ENST00000419442 C2orf66Q6UXQ4 117 aa5.63□□□□□ -1.51
RAPGEF1-205ENST00000419442 HIST3H2BBQ8N257 126 aa5.63□□□□□ -1.51
RAPGEF1-205ENST00000419442 OSTCQ9NRP0 149 aa5.63□□□□□ -1.51
RAPGEF1-205ENST00000419442 CDKN2A-AS1Q9UH64 79 aa5.63□□□□□ -1.51
RAPGEF1-205ENST00000419442 TRGC2P03986 189 aa5.62□□□□□ -1.51
RAPGEF1-205ENST00000419442 CEBPGP53567 150 aa5.62□□□□□ -1.51
RAPGEF1-205ENST00000419442 ADIRFQ15847 76 aa5.62□□□□□ -1.51
RAPGEF1-205ENST00000419442 LINC00483Q53H64 154 aa5.62□□□□□ -1.51
RAPGEF1-205ENST00000419442 LINC01551Q86U37 167 aa5.62□□□□□ -1.51
RAPGEF1-205ENST00000419442 NDUFA6P56556 154 aa5.61□□□□□ -1.51
RAPGEF1-205ENST00000419442 HERVK_113P63121 156 aa5.61□□□□□ -1.51
RAPGEF1-205ENST00000419442 SSBP3-AS1Q7Z2R9 100 aa5.61□□□□□ -1.51
RAPGEF1-205ENST00000419442 KRTAP9-8Q9BYQ0 159 aa5.61□□□□□ -1.51
RAPGEF1-205ENST00000419442 V9GYV3 84 aa5.61□□□□□ -1.51
RAPGEF1-205ENST00000419442 SMIM1B2RUZ4 78 aa5.6□□□□□ -1.51
RAPGEF1-205ENST00000419442 D6R8Y8 96 aa5.6□□□□□ -1.51
RAPGEF1-205ENST00000419442 SEC11AP67812 179 aa5.6□□□□□ -1.51
RAPGEF1-205ENST00000419442 VCX2Q9H322 139 aa5.6□□□□□ -1.51
RAPGEF1-205ENST00000419442 PDZD11Q5EBL8 140 aa5.59□□□□□ -1.51
RAPGEF1-205ENST00000419442 COX7B2Q8TF08 81 aa5.59□□□□□ -1.51
RAPGEF1-205ENST00000419442 IGIPA6NJ69 53 aa5.58□□□□□ -1.52
RAPGEF1-205ENST00000419442 PPBPP02775 128 aa5.58□□□□□ -1.52
RAPGEF1-205ENST00000419442 MOBPQ13875 183 aa5.58□□□□□ -1.52
RAPGEF1-205ENST00000419442 JOSD1Q15040 202 aaPredicted RBP5.58□□□□□ -1.52
RAPGEF1-205ENST00000419442 PYY3Q5JQD4 70 aa5.58□□□□□ -1.52
RAPGEF1-205ENST00000419442 Q8NDZ9 215 aa5.58□□□□□ -1.52
RAPGEF1-205ENST00000419442 HIST1H2BLQ99880 126 aa5.58□□□□□ -1.52
RAPGEF1-205ENST00000419442 NAT8BQ9UHF3 227 aa5.58□□□□□ -1.52
RAPGEF1-205ENST00000419442 A0A1B0GW15 77 aa5.57□□□□□ -1.52
RAPGEF1-205ENST00000419442 PCP4L1A6NKN8 68 aa5.57□□□□□ -1.52
RAPGEF1-205ENST00000419442 RPL24P83731 157 aaKnown RBP5.57□□□□□ -1.52
RAPGEF1-205ENST00000419442 CYSLTR1Q9Y271 337 aa5.57□□□□□ -1.52
RAPGEF1-205ENST00000419442 SMCR5Q8TEV8 140 aa5.56□□□□□ -1.52
RAPGEF1-205ENST00000419442 SND1-IT1Q9HBX3 110 aa5.56□□□□□ -1.52
RAPGEF1-205ENST00000419442 IGLV5-45A0A087WSX0 123 aa5.55□□□□□ -1.52
RAPGEF1-205ENST00000419442 LINC00587B1AMM8 73 aa5.55□□□□□ -1.52
RAPGEF1-205ENST00000419442 TRAPPC1Q9Y5R8 145 aa5.55□□□□□ -1.52
RAPGEF1-205ENST00000419442 IGLV9-49A0A0B4J1Y8 123 aa5.54□□□□□ -1.52
RAPGEF1-205ENST00000419442 SMIM27A0A1W2PRY6 76 aa5.54□□□□□ -1.52
RAPGEF1-205ENST00000419442 C9orf92A6NGG3 77 aa5.54□□□□□ -1.52
RAPGEF1-205ENST00000419442 FABP4P15090 132 aa5.54□□□□□ -1.52
RAPGEF1-205ENST00000419442 SPRR1AP35321 89 aa5.54□□□□□ -1.52
RAPGEF1-205ENST00000419442 ORMDL3Q8N138 153 aa5.54□□□□□ -1.52
RAPGEF1-205ENST00000419442 A0A1B0GXF2 115 aa5.53□□□□□ -1.52
RAPGEF1-205ENST00000419442 TSTD3H0UI37 97 aa5.53□□□□□ -1.52
RAPGEF1-205ENST00000419442 KRTAP6-3Q3LI67 103 aa5.53□□□□□ -1.52
RAPGEF1-205ENST00000419442 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
RAPGEF1-205ENST00000419442 ATP5LO75964 103 aa5.52□□□□□ -1.53
RAPGEF1-205ENST00000419442 PFN2P35080 140 aa5.52□□□□□ -1.53
RAPGEF1-205ENST00000419442 PAPPA-AS1Q5QFB9 102 aa5.52□□□□□ -1.53
RAPGEF1-205ENST00000419442 GAGE2AQ6NT46 116 aa5.52□□□□□ -1.53
RAPGEF1-205ENST00000419442 TMEM136Q6ZRR5 245 aa5.52□□□□□ -1.53
RAPGEF1-205ENST00000419442 ATP5L2Q7Z4Y8 100 aa5.52□□□□□ -1.53
RAPGEF1-205ENST00000419442 PRELID3AQ96N28 172 aa5.52□□□□□ -1.53
RAPGEF1-205ENST00000419442 TINCRA0A1B0GVN0 87 aa5.51□□□□□ -1.53
RAPGEF1-205ENST00000419442 DDTP30046 118 aa5.51□□□□□ -1.53
RAPGEF1-205ENST00000419442 RPL37P61927 97 aaKnown RBP5.51□□□□□ -1.53
RAPGEF1-205ENST00000419442 Q8N8P6 123 aa5.51□□□□□ -1.53
RAPGEF1-205ENST00000419442 TIMM17AQ99595 171 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms