RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 LGALS3P17931 250 aaKnown RBP10.89□□□□□ -0.67
EPCAM-203ENST00000419334 UBE2BP63146 152 aa10.89□□□□□ -0.67
EPCAM-203ENST00000419334 LBHQ53QV2 105 aaPredicted RBP10.89□□□□□ -0.67
EPCAM-203ENST00000419334 MEIG1Q5JSS6 88 aa10.89□□□□□ -0.67
EPCAM-203ENST00000419334 SMIM13P0DJ93 91 aa10.88□□□□□ -0.67
EPCAM-203ENST00000419334 S100A2P29034 98 aa10.88□□□□□ -0.67
EPCAM-203ENST00000419334 MRPL55Q7Z7F7 128 aaKnown RBP10.88□□□□□ -0.67
EPCAM-203ENST00000419334 HIST1H2BLQ99880 126 aa10.88□□□□□ -0.67
EPCAM-203ENST00000419334 A0A0U1RRA0 63 aa10.87□□□□□ -0.67
EPCAM-203ENST00000419334 C1orf137Q5JT78 98 aa10.87□□□□□ -0.67
EPCAM-203ENST00000419334 PKHD1L1Q86WI1 4243 aa10.86□□□□□ -0.67
EPCAM-203ENST00000419334 VPREB1P12018 145 aa10.85□□□□□ -0.67
EPCAM-203ENST00000419334 AKR1D1P51857 326 aa10.85□□□□□ -0.67
EPCAM-203ENST00000419334 RPL24P83731 157 aaKnown RBP10.85□□□□□ -0.67
EPCAM-203ENST00000419334 SRSF9Q13242 221 aaKnown RBP eCLIP10.85□□□□□ -0.67
EPCAM-203ENST00000419334 NKAPP1Q8N9T2 125 aa10.85□□□□□ -0.67
EPCAM-203ENST00000419334 MYCBP2O75592 4640 aa10.85□□□□□ -0.67
EPCAM-203ENST00000419334 KRTAP29-1A8MX34 341 aaPredicted RBP10.84□□□□□ -0.67
EPCAM-203ENST00000419334 SPINK6Q6UWN8 80 aa10.84□□□□□ -0.67
EPCAM-203ENST00000419334 MIR7-3HGQ8N6C7 128 aa10.84□□□□□ -0.67
EPCAM-203ENST00000419334 LINC00167Q96N53 147 aa10.84□□□□□ -0.67
EPCAM-203ENST00000419334 OXTP01178 125 aa10.83□□□□□ -0.68
EPCAM-203ENST00000419334 SNRPEP62304 92 aaKnown RBP10.83□□□□□ -0.68
EPCAM-203ENST00000419334 IGLV7-43P04211 117 aa10.82□□□□□ -0.68
EPCAM-203ENST00000419334 IGKV2D-26A0A0A0MRZ7 120 aa10.81□□□□□ -0.68
EPCAM-203ENST00000419334 C5orf52A6NGY3 159 aa10.81□□□□□ -0.68
EPCAM-203ENST00000419334 Q8NDZ9 215 aa10.81□□□□□ -0.68
EPCAM-203ENST00000419334 HERC1Q15751 4861 aa10.81□□□□□ -0.68
EPCAM-203ENST00000419334 A0A0J9YXY3 114 aa10.8□□□□□ -0.68
EPCAM-203ENST00000419334 GAGE10A6NGK3 116 aa10.8□□□□□ -0.68
EPCAM-203ENST00000419334 RPL37AP8A6NKH3 93 aa10.79□□□□□ -0.68
EPCAM-203ENST00000419334 ATOH7Q8N100 152 aa10.79□□□□□ -0.68
EPCAM-203ENST00000419334 LOC107984156A0A0G2JMH3 177 aa10.78□□□□□ -0.68
EPCAM-203ENST00000419334 ARL17AQ8IVW1 177 aa10.78□□□□□ -0.68
EPCAM-203ENST00000419334 BOD1L2Q8IYS8 172 aa10.78□□□□□ -0.68
EPCAM-203ENST00000419334 DAND5Q8N907 189 aa10.78□□□□□ -0.68
EPCAM-203ENST00000419334 DMBT1Q9UGM3 2413 aaPredicted RBP10.78□□□□□ -0.68
EPCAM-203ENST00000419334 ANKRD39Q53RE8 183 aa10.77□□□□□ -0.69
EPCAM-203ENST00000419334 IGLV1-50A0A075B6I6 118 aa10.76□□□□□ -0.69
EPCAM-203ENST00000419334 ZNF815PA8K554 130 aa10.76□□□□□ -0.69
EPCAM-203ENST00000419334 J3QL48 77 aa10.76□□□□□ -0.69
EPCAM-203ENST00000419334 IGKV2-28A0A075B6P5 120 aa10.75□□□□□ -0.69
EPCAM-203ENST00000419334 BCE1O60756 84 aa10.75□□□□□ -0.69
EPCAM-203ENST00000419334 IGKV2D-28P01615 120 aa10.75□□□□□ -0.69
EPCAM-203ENST00000419334 REG3GQ6UW15 175 aa10.75□□□□□ -0.69
EPCAM-203ENST00000419334 TTTY13Q9BZ97 58 aa10.75□□□□□ -0.69
EPCAM-203ENST00000419334 LRP1Q07954 4544 aaKnown RBP10.74□□□□□ -0.69
EPCAM-203ENST00000419334 M0R378 163 aa10.74□□□□□ -0.69
EPCAM-203ENST00000419334 TIMM17BO60830 172 aa10.74□□□□□ -0.69
EPCAM-203ENST00000419334 DIRC1Q969H9 104 aa10.74□□□□□ -0.69
EPCAM-203ENST00000419334 ADAMTSL4-AS1Q5T5F5 129 aa10.73□□□□□ -0.69
EPCAM-203ENST00000419334 LITAFQ99732 161 aa10.73□□□□□ -0.69
EPCAM-203ENST00000419334 MIEN1Q9BRT3 115 aa10.73□□□□□ -0.69
EPCAM-203ENST00000419334 H0Y9J4 135 aa10.72□□□□□ -0.69
EPCAM-203ENST00000419334 ZNF861PO60384 105 aa10.72□□□□□ -0.69
EPCAM-203ENST00000419334 NCR3O14931 201 aa10.71□□□□□ -0.69
EPCAM-203ENST00000419334 LINC01600Q96MT4 127 aa10.71□□□□□ -0.69
EPCAM-203ENST00000419334 FAT3Q8TDW7 4589 aa10.71□□□□□ -0.7
EPCAM-203ENST00000419334 NDUFC2O95298 119 aa10.7□□□□□ -0.7
EPCAM-203ENST00000419334 SOSTDC1Q6X4U4 206 aa10.7□□□□□ -0.7
EPCAM-203ENST00000419334 TMEM126AQ9H061 195 aa10.7□□□□□ -0.7
EPCAM-203ENST00000419334 RPL28P46779 137 aaKnown RBP10.69□□□□□ -0.7
EPCAM-203ENST00000419334 TRBV10-2A0A0K0K1G8 114 aa10.68□□□□□ -0.7
EPCAM-203ENST00000419334 HSBP1L1C9JCN9 74 aa10.68□□□□□ -0.7
EPCAM-203ENST00000419334 TMEM238C9JI98 176 aa10.68□□□□□ -0.7
EPCAM-203ENST00000419334 EIF4EBP3O60516 100 aaPredicted RBP10.68□□□□□ -0.7
EPCAM-203ENST00000419334 MT1HL1P0DM35 61 aa10.68□□□□□ -0.7
EPCAM-203ENST00000419334 NPC2P61916 151 aa10.68□□□□□ -0.7
EPCAM-203ENST00000419334 SCGB1D4Q6XE38 83 aa10.68□□□□□ -0.7
EPCAM-203ENST00000419334 PCP2Q8IVA1 136 aa10.68□□□□□ -0.7
EPCAM-203ENST00000419334 SPANXB1Q9NS25 103 aaPredicted RBP10.68□□□□□ -0.7
EPCAM-203ENST00000419334 SCGB1D1O95968 90 aa10.67□□□□□ -0.7
EPCAM-203ENST00000419334 KRTAP13-1Q8IUC0 172 aa10.67□□□□□ -0.7
EPCAM-203ENST00000419334 LINC00308Q8TCZ7 52 aa10.67□□□□□ -0.7
EPCAM-203ENST00000419334 UBE2AP49459 152 aa10.66□□□□□ -0.7
EPCAM-203ENST00000419334 TRBV10-3A0A0K0K1G6 114 aa10.65□□□□□ -0.7
EPCAM-203ENST00000419334 PRYO14603 147 aa10.65□□□□□ -0.7
EPCAM-203ENST00000419334 SPANXDQ9BXN6 97 aa10.65□□□□□ -0.7
EPCAM-203ENST00000419334 KCNQ1DNQ9H478 68 aa10.65□□□□□ -0.7
EPCAM-203ENST00000419334 SPANXCQ9NY87 97 aa10.65□□□□□ -0.7
EPCAM-203ENST00000419334 FAM19A1Q7Z5A9 133 aa10.64□□□□□ -0.71
EPCAM-203ENST00000419334 KRTAP1-4P0C5Y4 121 aa10.62□□□□□ -0.71
EPCAM-203ENST00000419334 DDTP30046 118 aa10.62□□□□□ -0.71
EPCAM-203ENST00000419334 SPRR1AP35321 89 aa10.62□□□□□ -0.71
EPCAM-203ENST00000419334 PRLHP81277 87 aa10.62□□□□□ -0.71
EPCAM-203ENST00000419334 KRTAP10-8P60410 259 aa10.61□□□□□ -0.71
EPCAM-203ENST00000419334 S100A12P80511 92 aa10.61□□□□□ -0.71
EPCAM-203ENST00000419334 Q6ZVH6 145 aa10.61□□□□□ -0.71
EPCAM-203ENST00000419334 IGLV6-57P01721 117 aa10.6□□□□□ -0.71
EPCAM-203ENST00000419334 S100A7L2Q5SY68 101 aa10.6□□□□□ -0.71
EPCAM-203ENST00000419334 LINC00337Q8N6G1 96 aa10.6□□□□□ -0.71
EPCAM-203ENST00000419334 PPDPFQ9H3Y8 114 aa10.6□□□□□ -0.71
EPCAM-203ENST00000419334 IFITM1P13164 125 aa10.59□□□□□ -0.71
EPCAM-203ENST00000419334 COPS9Q8WXC6 57 aa10.59□□□□□ -0.71
EPCAM-203ENST00000419334 TMA7Q9Y2S6 64 aaKnown RBP10.59□□□□□ -0.71
EPCAM-203ENST00000419334 KRTAP4-16G5E9R7 235 aaPredicted RBP10.58□□□□□ -0.72
EPCAM-203ENST00000419334 JOSD1Q15040 202 aaPredicted RBP10.58□□□□□ -0.72
EPCAM-203ENST00000419334 TNXBP22105 4242 aa10.55□□□□□ -0.72
EPCAM-203ENST00000419334 ETDCA0A1B0GVM5 59 aa10.55□□□□□ -0.72
EPCAM-203ENST00000419334 LINC00518Q8N0U6 118 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms