RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 C10orf25Q5T742 122 aa9.73□□□□□ -0.85
HLA-DPA1-242ENST00000419277 UPK3BQ9BT76 320 aa9.73□□□□□ -0.85
HLA-DPA1-242ENST00000419277 A0A087WYN8 130 aa9.72□□□□□ -0.85
HLA-DPA1-242ENST00000419277 K7EIL1 84 aa9.72□□□□□ -0.85
HLA-DPA1-242ENST00000419277 LECT2O14960 151 aa9.72□□□□□ -0.85
HLA-DPA1-242ENST00000419277 IGLV6-57P01721 117 aa9.72□□□□□ -0.85
HLA-DPA1-242ENST00000419277 Q6Q795 121 aa9.72□□□□□ -0.85
HLA-DPA1-242ENST00000419277 C6orf223Q8N319 242 aa9.72□□□□□ -0.85
HLA-DPA1-242ENST00000419277 COL6A5A8TX70 2615 aa9.71□□□□□ -0.85
HLA-DPA1-242ENST00000419277 NDUFC2-KCTD14E9PQ53 114 aa9.7□□□□□ -0.86
HLA-DPA1-242ENST00000419277 TMEM256-PLSCR3K7ERE1 68 aa9.7□□□□□ -0.86
HLA-DPA1-242ENST00000419277 C15orf56Q8N910 161 aa9.7□□□□□ -0.86
HLA-DPA1-242ENST00000419277 OBSCN-AS1Q96MR7 158 aa9.7□□□□□ -0.86
HLA-DPA1-242ENST00000419277 CMYA5Q8N3K9 4069 aa9.7□□□□□ -0.86
HLA-DPA1-242ENST00000419277 TRBV7-6A0A0J9YX20 115 aa9.7□□□□□ -0.86
HLA-DPA1-242ENST00000419277 JMJD7-PLA2G4BH0Y9G9 81 aa9.69□□□□□ -0.86
HLA-DPA1-242ENST00000419277 Q8N814 137 aa9.69□□□□□ -0.86
HLA-DPA1-242ENST00000419277 ANK2Q01484 3957 aa9.69□□□□□ -0.86
HLA-DPA1-242ENST00000419277 IGKV2D-24A0A075B6R9 120 aa9.68□□□□□ -0.86
HLA-DPA1-242ENST00000419277 MT-ATP8P03928 68 aa9.68□□□□□ -0.86
HLA-DPA1-242ENST00000419277 Q9HAA7 133 aa9.68□□□□□ -0.86
HLA-DPA1-242ENST00000419277 TENM3Q9P273 2699 aa9.68□□□□□ -0.86
HLA-DPA1-242ENST00000419277 NCR3O14931 201 aa9.68□□□□□ -0.86
HLA-DPA1-242ENST00000419277 C6orf99Q4VX62 202 aa9.67□□□□□ -0.86
HLA-DPA1-242ENST00000419277 C22orf24Q9Y442 160 aa9.67□□□□□ -0.86
HLA-DPA1-242ENST00000419277 TLX1NBP0CAT3 122 aa9.66□□□□□ -0.86
HLA-DPA1-242ENST00000419277 IMUPQ9GZP8 106 aa9.66□□□□□ -0.86
HLA-DPA1-242ENST00000419277 NOTCH1P46531 2555 aa9.65□□□□□ -0.86
HLA-DPA1-242ENST00000419277 SYCNQ0VAF6 134 aa9.65□□□□□ -0.86
HLA-DPA1-242ENST00000419277 SDIM1Q6ZPB5 146 aa9.65□□□□□ -0.86
HLA-DPA1-242ENST00000419277 TRAV23DV6A0A075B6W5 121 aa9.65□□□□□ -0.87
HLA-DPA1-242ENST00000419277 A0A1B0GV72 72 aa9.65□□□□□ -0.87
HLA-DPA1-242ENST00000419277 M0R378 163 aa9.65□□□□□ -0.87
HLA-DPA1-242ENST00000419277 RPL18AQ02543 176 aaKnown RBP9.65□□□□□ -0.87
HLA-DPA1-242ENST00000419277 HIGD2BQ4VC39 106 aa9.65□□□□□ -0.87
HLA-DPA1-242ENST00000419277 LINC00575Q6W349 94 aa9.65□□□□□ -0.87
HLA-DPA1-242ENST00000419277 Q6ZRU5 148 aa9.65□□□□□ -0.87
HLA-DPA1-242ENST00000419277 DIRC1Q969H9 104 aa9.65□□□□□ -0.87
HLA-DPA1-242ENST00000419277 LINC00526Q96FQ7 95 aa9.65□□□□□ -0.87
HLA-DPA1-242ENST00000419277 LINC00588Q9Y4M8 146 aa9.65□□□□□ -0.87
HLA-DPA1-242ENST00000419277 NBEAL1Q6ZS30 2694 aa9.64□□□□□ -0.87
HLA-DPA1-242ENST00000419277 PRR3P79522 188 aaKnown RBP9.64□□□□□ -0.87
HLA-DPA1-242ENST00000419277 GAGE2BQ13066 116 aa9.64□□□□□ -0.87
HLA-DPA1-242ENST00000419277 GAGE2EQ4V326 116 aa9.64□□□□□ -0.87
HLA-DPA1-242ENST00000419277 LINC00643Q86TS7 51 aa9.64□□□□□ -0.87
HLA-DPA1-242ENST00000419277 GAGE2DQ9UEU5 116 aa9.64□□□□□ -0.87
HLA-DPA1-242ENST00000419277 VPREB1P12018 145 aa9.63□□□□□ -0.87
HLA-DPA1-242ENST00000419277 MRAPQ8TCY5 172 aa9.63□□□□□ -0.87
HLA-DPA1-242ENST00000419277 TRBV7-7A0A0K0K1E9 115 aa9.62□□□□□ -0.87
HLA-DPA1-242ENST00000419277 hADV29S1A0JD25 119 aa9.62□□□□□ -0.87
HLA-DPA1-242ENST00000419277 Q8NDZ9 215 aa9.62□□□□□ -0.87
HLA-DPA1-242ENST00000419277 PLA2G2DQ9UNK4 145 aa9.62□□□□□ -0.87
HLA-DPA1-242ENST00000419277 TRBV10-3A0A0K0K1G6 114 aa9.6□□□□□ -0.87
HLA-DPA1-242ENST00000419277 ZNF73O43830 326 aaPredicted RBP9.6□□□□□ -0.87
HLA-DPA1-242ENST00000419277 XAGE1AQ9HD64 81 aa9.6□□□□□ -0.87
HLA-DPA1-242ENST00000419277 B9D2Q9BPU9 175 aa9.59□□□□□ -0.87
HLA-DPA1-242ENST00000419277 PDE6GP18545 87 aa9.59□□□□□ -0.87
HLA-DPA1-242ENST00000419277 ELOF1P60002 83 aaKnown RBP9.59□□□□□ -0.87
HLA-DPA1-242ENST00000419277 GAGE2AQ6NT46 116 aa9.59□□□□□ -0.87
HLA-DPA1-242ENST00000419277 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.59□□□□□ -0.87
HLA-DPA1-242ENST00000419277 PRB2P02812 416 aaPredicted RBP9.56□□□□□ -0.88
HLA-DPA1-242ENST00000419277 COX7BP24311 80 aa9.56□□□□□ -0.88
HLA-DPA1-242ENST00000419277 Q6ZRP5 223 aa9.56□□□□□ -0.88
HLA-DPA1-242ENST00000419277 C14orf132Q9NPU4 83 aa9.56□□□□□ -0.88
HLA-DPA1-242ENST00000419277 MGAM2Q2M2H8 2515 aa9.55□□□□□ -0.88
HLA-DPA1-242ENST00000419277 IGLV5-37A0A075B6J1 123 aa9.55□□□□□ -0.88
HLA-DPA1-242ENST00000419277 CCKP06307 115 aa9.55□□□□□ -0.88
HLA-DPA1-242ENST00000419277 NKAPP1Q8N9T2 125 aa9.55□□□□□ -0.88
HLA-DPA1-242ENST00000419277 USP17L23D6RBM5 183 aa9.54□□□□□ -0.88
HLA-DPA1-242ENST00000419277 NHLRC4P0CG21 123 aaPredicted RBP9.54□□□□□ -0.88
HLA-DPA1-242ENST00000419277 TTC32Q5I0X7 151 aa9.54□□□□□ -0.88
HLA-DPA1-242ENST00000419277 SLPIP03973 132 aa9.53□□□□□ -0.88
HLA-DPA1-242ENST00000419277 ATP5EP2Q5VTU8 51 aa9.53□□□□□ -0.88
HLA-DPA1-242ENST00000419277 PKIGQ9Y2B9 76 aa9.53□□□□□ -0.88
HLA-DPA1-242ENST00000419277 LOC110117498A0A087WWA1 95 aa9.52□□□□□ -0.89
HLA-DPA1-242ENST00000419277 C14orf177Q52M58 125 aa9.52□□□□□ -0.89
HLA-DPA1-242ENST00000419277 KCNQ1DNQ9H478 68 aa9.52□□□□□ -0.89
HLA-DPA1-242ENST00000419277 RBM3P98179 157 aaKnown RBP9.51□□□□□ -0.89
HLA-DPA1-242ENST00000419277 Q6ZQY7 126 aa9.51□□□□□ -0.89
HLA-DPA1-242ENST00000419277 NUPR2A6NF83 97 aa9.51□□□□□ -0.89
HLA-DPA1-242ENST00000419277 C9orf129Q5T035 196 aaKnown RBP9.51□□□□□ -0.89
HLA-DPA1-242ENST00000419277 HUWE1Q7Z6Z7 4374 aaKnown RBP9.5□□□□□ -0.89
HLA-DPA1-242ENST00000419277 LOC107984640A0A0U1RRK4 108 aa9.5□□□□□ -0.89
HLA-DPA1-242ENST00000419277 NDUFV3P56181 108 aaKnown RBP9.5□□□□□ -0.89
HLA-DPA1-242ENST00000419277 Q6JHZ5 121 aa9.5□□□□□ -0.89
HLA-DPA1-242ENST00000419277 LINC00528Q8N1L1 170 aa9.5□□□□□ -0.89
HLA-DPA1-242ENST00000419277 ANAPC13Q9BS18 74 aa9.5□□□□□ -0.89
HLA-DPA1-242ENST00000419277 PRYO14603 147 aa9.49□□□□□ -0.89
HLA-DPA1-242ENST00000419277 SMCR5Q8TEV8 140 aa9.49□□□□□ -0.89
HLA-DPA1-242ENST00000419277 UBE2DNLQ8IWF7 75 aa9.48□□□□□ -0.89
HLA-DPA1-242ENST00000419277 CNBPP62633 177 aaKnown RBP9.48□□□□□ -0.89
HLA-DPA1-242ENST00000419277 DSCR8Q96T75 97 aa9.48□□□□□ -0.89
HLA-DPA1-242ENST00000419277 LAMTOR3Q9UHA4 124 aa9.48□□□□□ -0.89
HLA-DPA1-242ENST00000419277 APLNQ9ULZ1 77 aa9.48□□□□□ -0.89
HLA-DPA1-242ENST00000419277 DHRS4-AS1Q9P1J3 65 aa9.46□□□□□ -0.89
HLA-DPA1-242ENST00000419277 MDFIQ99750 246 aa9.45□□□□□ -0.9
HLA-DPA1-242ENST00000419277 Q6ZQT0 140 aa9.45□□□□□ -0.9
HLA-DPA1-242ENST00000419277 C7orf33Q8WU49 177 aa9.45□□□□□ -0.9
HLA-DPA1-242ENST00000419277 UBL5Q9BZL1 73 aa9.45□□□□□ -0.9
HLA-DPA1-242ENST00000419277 LINC00846Q9NV44 126 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 316.3 ms