RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 KRTDAPP60985 99 aa4.3□□□□□ -1.72
LINC02539-202ENST00000419220 RPL24P83731 157 aaKnown RBP4.3□□□□□ -1.72
LINC02539-202ENST00000419220 GAGE2EQ4V326 116 aa4.3□□□□□ -1.72
LINC02539-202ENST00000419220 MEIG1Q5JSS6 88 aa4.3□□□□□ -1.72
LINC02539-202ENST00000419220 SCXQ7RTU7 201 aa4.3□□□□□ -1.72
LINC02539-202ENST00000419220 CIRBP-AS1Q8TBR5 109 aa4.3□□□□□ -1.72
LINC02539-202ENST00000419220 PLAC8Q9NZF1 115 aa4.3□□□□□ -1.72
LINC02539-202ENST00000419220 C6orf48Q9UBA6 75 aa4.3□□□□□ -1.72
LINC02539-202ENST00000419220 GAGE2DQ9UEU5 116 aa4.3□□□□□ -1.72
LINC02539-202ENST00000419220 DNAH11Q96DT5 4516 aa4.29□□□□□ -1.72
LINC02539-202ENST00000419220 A0A096LNI7 61 aa4.29□□□□□ -1.72
LINC02539-202ENST00000419220 XGP55808 180 aa4.29□□□□□ -1.72
LINC02539-202ENST00000419220 LINC00158P58513 81 aa4.29□□□□□ -1.72
LINC02539-202ENST00000419220 C2orf82Q6UX34 121 aa4.29□□□□□ -1.72
LINC02539-202ENST00000419220 MIEN1Q9BRT3 115 aa4.29□□□□□ -1.72
LINC02539-202ENST00000419220 NUPR1O60356 82 aa4.28□□□□□ -1.72
LINC02539-202ENST00000419220 SMR3BP02814 79 aaPredicted RBP4.28□□□□□ -1.72
LINC02539-202ENST00000419220 PFN2P35080 140 aa4.28□□□□□ -1.72
LINC02539-202ENST00000419220 RPL37AP61513 92 aaKnown RBP4.28□□□□□ -1.72
LINC02539-202ENST00000419220 UBE2BP63146 152 aa4.28□□□□□ -1.72
LINC02539-202ENST00000419220 Q5VSD8 79 aa4.28□□□□□ -1.72
LINC02539-202ENST00000419220 Q6ZRP5 223 aa4.28□□□□□ -1.72
LINC02539-202ENST00000419220 NKAPP1Q8N9T2 125 aa4.28□□□□□ -1.72
LINC02539-202ENST00000419220 NDUFA12Q9UI09 145 aa4.28□□□□□ -1.72
LINC02539-202ENST00000419220 ERG28Q9UKR5 140 aa4.28□□□□□ -1.72
LINC02539-202ENST00000419220 CBY1Q9Y3M2 126 aa4.28□□□□□ -1.72
LINC02539-202ENST00000419220 J3QQQ9 107 aa4.27□□□□□ -1.73
LINC02539-202ENST00000419220 C3orf79P0CE67 100 aa4.27□□□□□ -1.73
LINC02539-202ENST00000419220 C9orf116Q5BN46 136 aaPredicted RBP4.27□□□□□ -1.73
LINC02539-202ENST00000419220 LINC01545Q5VT33 79 aa4.27□□□□□ -1.73
LINC02539-202ENST00000419220 BIRC6Q9NR09 4857 aa4.26□□□□□ -1.73
LINC02539-202ENST00000419220 E9PLD3 99 aa4.26□□□□□ -1.73
LINC02539-202ENST00000419220 CHTF8P0CG12 524 aa4.26□□□□□ -1.73
LINC02539-202ENST00000419220 TP73-AS1Q9UF72 201 aa4.26□□□□□ -1.73
LINC02539-202ENST00000419220 DNAH5Q8TE73 4624 aa4.26□□□□□ -1.73
LINC02539-202ENST00000419220 M0QXV9 152 aa4.25□□□□□ -1.73
LINC02539-202ENST00000419220 INAFM2P0DMQ5 153 aa4.25□□□□□ -1.73
LINC02539-202ENST00000419220 FAM19A5Q7Z5A7 132 aaPredicted RBP4.25□□□□□ -1.73
LINC02539-202ENST00000419220 ZNF625Q96I27 306 aaPredicted RBP4.25□□□□□ -1.73
LINC02539-202ENST00000419220 PMCHL2Q9BQD1 86 aa4.25□□□□□ -1.73
LINC02539-202ENST00000419220 LRP1BQ9NZR2 4599 aa4.25□□□□□ -1.73
LINC02539-202ENST00000419220 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
LINC02539-202ENST00000419220 SCGB1D4Q6XE38 83 aa4.24□□□□□ -1.73
LINC02539-202ENST00000419220 HIST3H2BBQ8N257 126 aa4.24□□□□□ -1.73
LINC02539-202ENST00000419220 MPLKIPQ8TAP9 179 aa4.24□□□□□ -1.73
LINC02539-202ENST00000419220 DYNC1H1Q14204 4646 aaKnown RBP4.24□□□□□ -1.73
LINC02539-202ENST00000419220 IGKV2D-26A0A0A0MRZ7 120 aa4.23□□□□□ -1.73
LINC02539-202ENST00000419220 TMEM238C9JI98 176 aa4.23□□□□□ -1.73
LINC02539-202ENST00000419220 HAMPP81172 84 aa4.23□□□□□ -1.73
LINC02539-202ENST00000419220 REG3GQ6UW15 175 aa4.23□□□□□ -1.73
LINC02539-202ENST00000419220 Q6ZVH6 145 aa4.23□□□□□ -1.73
LINC02539-202ENST00000419220 MRPL55Q7Z7F7 128 aaKnown RBP4.23□□□□□ -1.73
LINC02539-202ENST00000419220 HIST1H2BLQ99880 126 aa4.23□□□□□ -1.73
LINC02539-202ENST00000419220 XAGE1AQ9HD64 81 aa4.23□□□□□ -1.73
LINC02539-202ENST00000419220 C22orf24Q9Y442 160 aa4.23□□□□□ -1.73
LINC02539-202ENST00000419220 A0A1W2PNN7 141 aa4.22□□□□□ -1.73
LINC02539-202ENST00000419220 C5orf52A6NGY3 159 aa4.22□□□□□ -1.73
LINC02539-202ENST00000419220 ZNF815PA8K554 130 aa4.22□□□□□ -1.73
LINC02539-202ENST00000419220 TIMM17BO60830 172 aa4.22□□□□□ -1.73
LINC02539-202ENST00000419220 SMIM13P0DJ93 91 aa4.22□□□□□ -1.73
LINC02539-202ENST00000419220 HINT1P49773 126 aaPredicted RBP4.22□□□□□ -1.73
LINC02539-202ENST00000419220 C1orf137Q5JT78 98 aa4.22□□□□□ -1.73
LINC02539-202ENST00000419220 KRTAP5-11Q6L8G4 156 aa4.22□□□□□ -1.73
LINC02539-202ENST00000419220 SPINK6Q6UWN8 80 aa4.22□□□□□ -1.73
LINC02539-202ENST00000419220 SND1-IT1Q9HBX3 110 aa4.22□□□□□ -1.73
LINC02539-202ENST00000419220 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
LINC02539-202ENST00000419220 A0A0U1RRA0 63 aa4.21□□□□□ -1.74
LINC02539-202ENST00000419220 PANO1I0J062 215 aa4.21□□□□□ -1.74
LINC02539-202ENST00000419220 M0R378 163 aa4.21□□□□□ -1.74
LINC02539-202ENST00000419220 HNRNPA3P51991 378 aaKnown RBP4.21□□□□□ -1.74
LINC02539-202ENST00000419220 S100A7L2Q5SY68 101 aa4.21□□□□□ -1.74
LINC02539-202ENST00000419220 C9orf129Q5T035 196 aaKnown RBP4.21□□□□□ -1.74
LINC02539-202ENST00000419220 PHF5AQ7RTV0 110 aaKnown RBP4.21□□□□□ -1.74
LINC02539-202ENST00000419220 BOD1L2Q8IYS8 172 aa4.21□□□□□ -1.74
LINC02539-202ENST00000419220 LINC00518Q8N0U6 118 aa4.21□□□□□ -1.74
LINC02539-202ENST00000419220 MIR7-3HGQ8N6C7 128 aa4.21□□□□□ -1.74
LINC02539-202ENST00000419220 DNAH8Q96JB1 4490 aa4.21□□□□□ -1.74
LINC02539-202ENST00000419220 A0A0J9YXY3 114 aa4.2□□□□□ -1.74
LINC02539-202ENST00000419220 NDUFC2O95298 119 aa4.2□□□□□ -1.74
LINC02539-202ENST00000419220 IFITM1P13164 125 aa4.2□□□□□ -1.74
LINC02539-202ENST00000419220 RPL28P46779 137 aaKnown RBP4.2□□□□□ -1.74
LINC02539-202ENST00000419220 PRR3P79522 188 aaKnown RBP4.2□□□□□ -1.74
LINC02539-202ENST00000419220 JOSD1Q15040 202 aaPredicted RBP4.2□□□□□ -1.74
LINC02539-202ENST00000419220 DIRC1Q969H9 104 aa4.2□□□□□ -1.74
LINC02539-202ENST00000419220 LOC107984156A0A0G2JMH3 177 aa4.19□□□□□ -1.74
LINC02539-202ENST00000419220 TRBV10-2A0A0K0K1G8 114 aa4.19□□□□□ -1.74
LINC02539-202ENST00000419220 FAM168BA1KXE4 195 aa4.19□□□□□ -1.74
LINC02539-202ENST00000419220 OXTP01178 125 aa4.19□□□□□ -1.74
LINC02539-202ENST00000419220 UBE2AP49459 152 aa4.19□□□□□ -1.74
LINC02539-202ENST00000419220 SRSF9Q13242 221 aaKnown RBP eCLIP4.19□□□□□ -1.74
LINC02539-202ENST00000419220 ARL17AQ8IVW1 177 aa4.19□□□□□ -1.74
LINC02539-202ENST00000419220 LINC00167Q96N53 147 aa4.19□□□□□ -1.74
LINC02539-202ENST00000419220 SPANXB1Q9NS25 103 aaPredicted RBP4.19□□□□□ -1.74
LINC02539-202ENST00000419220 PSORS1C2Q9UIG4 136 aa4.19□□□□□ -1.74
LINC02539-202ENST00000419220 PAM16Q9Y3D7 125 aa4.19□□□□□ -1.74
LINC02539-202ENST00000419220 KIAA1109Q2LD37 5005 aa4.19□□□□□ -1.74
LINC02539-202ENST00000419220 RYR1P21817 5038 aa4.19□□□□□ -1.74
LINC02539-202ENST00000419220 APOBP04114 4563 aaKnown RBP4.19□□□□□ -1.74
LINC02539-202ENST00000419220 SRRM2Q9UQ35 2752 aaKnown RBP4.19□□□□□ -1.74
LINC02539-202ENST00000419220 HSPG2P98160 4391 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms