RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 FAM218AQ96MZ4 157 aa5.99□□□□□ -1.45
LINCMD1-201ENST00000418518 COL7A1Q02388 2944 aa5.99□□□□□ -1.45
LINCMD1-201ENST00000418518 RNF151Q2KHN1 245 aa5.98□□□□□ -1.45
LINCMD1-201ENST00000418518 HIGD2BQ4VC39 106 aa5.98□□□□□ -1.45
LINCMD1-201ENST00000418518 CAMK2N2Q96S95 79 aa5.98□□□□□ -1.45
LINCMD1-201ENST00000418518 TMEM126AQ9H061 195 aa5.98□□□□□ -1.45
LINCMD1-201ENST00000418518 PRKDCP78527 4128 aaKnown RBP5.97□□□□□ -1.45
LINCMD1-201ENST00000418518 A0A1B0GX51 115 aa5.97□□□□□ -1.45
LINCMD1-201ENST00000418518 Q6ZRU5 148 aa5.97□□□□□ -1.45
LINCMD1-201ENST00000418518 VPS25Q9BRG1 176 aa5.97□□□□□ -1.45
LINCMD1-201ENST00000418518 APLNQ9ULZ1 77 aa5.97□□□□□ -1.45
LINCMD1-201ENST00000418518 CBY1Q9Y3M2 126 aa5.97□□□□□ -1.45
LINCMD1-201ENST00000418518 VPS13DQ5THJ4 4388 aa5.96□□□□□ -1.45
LINCMD1-201ENST00000418518 NDUFC2-KCTD14E9PQ53 114 aa5.96□□□□□ -1.46
LINCMD1-201ENST00000418518 IGLV6-57P01721 117 aa5.96□□□□□ -1.46
LINCMD1-201ENST00000418518 TLX1NBP0CAT3 122 aa5.96□□□□□ -1.46
LINCMD1-201ENST00000418518 OR13C6PQ8NH95 151 aa5.96□□□□□ -1.46
LINCMD1-201ENST00000418518 LINC00167Q96N53 147 aa5.96□□□□□ -1.46
LINCMD1-201ENST00000418518 PLECQ15149 4684 aaKnown RBP5.95□□□□□ -1.46
LINCMD1-201ENST00000418518 SYCNQ0VAF6 134 aa5.95□□□□□ -1.46
LINCMD1-201ENST00000418518 Q9HAA7 133 aa5.95□□□□□ -1.46
LINCMD1-201ENST00000418518 C22orf24Q9Y442 160 aa5.95□□□□□ -1.46
LINCMD1-201ENST00000418518 A0A087WYN8 130 aa5.94□□□□□ -1.46
LINCMD1-201ENST00000418518 NCR3O14931 201 aa5.94□□□□□ -1.46
LINCMD1-201ENST00000418518 VPREB1P12018 145 aa5.94□□□□□ -1.46
LINCMD1-201ENST00000418518 PRR3P79522 188 aaKnown RBP5.94□□□□□ -1.46
LINCMD1-201ENST00000418518 TEX49A0A1B0GTD5 131 aa5.93□□□□□ -1.46
LINCMD1-201ENST00000418518 NUPR2A6NF83 97 aa5.93□□□□□ -1.46
LINCMD1-201ENST00000418518 USP17L23D6RBM5 183 aa5.93□□□□□ -1.46
LINCMD1-201ENST00000418518 BAALC-AS2P0C853 105 aa5.92□□□□□ -1.46
LINCMD1-201ENST00000418518 KRTAP21-3Q3LHN1 58 aa5.92□□□□□ -1.46
LINCMD1-201ENST00000418518 S100A7L2Q5SY68 101 aa5.92□□□□□ -1.46
LINCMD1-201ENST00000418518 CASC10Q5T4H9 136 aa5.92□□□□□ -1.46
LINCMD1-201ENST00000418518 KRTAP1-5Q9BYS1 174 aa5.92□□□□□ -1.46
LINCMD1-201ENST00000418518 CDIP1Q9H305 208 aa5.92□□□□□ -1.46
LINCMD1-201ENST00000418518 PLA2G2DQ9UNK4 145 aa5.92□□□□□ -1.46
LINCMD1-201ENST00000418518 TRBV7-6A0A0J9YX20 115 aa5.91□□□□□ -1.46
LINCMD1-201ENST00000418518 FAM240AA0A1B0GVK7 77 aa5.91□□□□□ -1.46
LINCMD1-201ENST00000418518 M0R378 163 aa5.91□□□□□ -1.46
LINCMD1-201ENST00000418518 LECT2O14960 151 aa5.91□□□□□ -1.46
LINCMD1-201ENST00000418518 DNAL4O96015 105 aa5.91□□□□□ -1.46
LINCMD1-201ENST00000418518 SLPIP03973 132 aa5.91□□□□□ -1.46
LINCMD1-201ENST00000418518 RPL18AQ02543 176 aaKnown RBP5.91□□□□□ -1.46
LINCMD1-201ENST00000418518 Q6ZRP5 223 aa5.91□□□□□ -1.46
LINCMD1-201ENST00000418518 XAGE1AQ9HD64 81 aa5.91□□□□□ -1.46
LINCMD1-201ENST00000418518 CSMD3Q7Z407 3707 aa5.91□□□□□ -1.46
LINCMD1-201ENST00000418518 DNAH6Q9C0G6 4158 aa5.9□□□□□ -1.46
LINCMD1-201ENST00000418518 IGLV5-37A0A075B6J1 123 aa5.9□□□□□ -1.46
LINCMD1-201ENST00000418518 TRBV10-3A0A0K0K1G6 114 aa5.9□□□□□ -1.46
LINCMD1-201ENST00000418518 C6orf99Q4VX62 202 aa5.9□□□□□ -1.46
LINCMD1-201ENST00000418518 C9orf129Q5T035 196 aaKnown RBP5.9□□□□□ -1.46
LINCMD1-201ENST00000418518 OBSCN-AS1Q96MR7 158 aa5.9□□□□□ -1.46
LINCMD1-201ENST00000418518 DNHD1Q96M86 4753 aa5.89□□□□□ -1.47
LINCMD1-201ENST00000418518 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
LINCMD1-201ENST00000418518 LINC00575Q6W349 94 aa5.89□□□□□ -1.47
LINCMD1-201ENST00000418518 UBE2DNLQ8IWF7 75 aa5.89□□□□□ -1.47
LINCMD1-201ENST00000418518 Q8N814 137 aa5.89□□□□□ -1.47
LINCMD1-201ENST00000418518 TRAV23DV6A0A075B6W5 121 aa5.88□□□□□ -1.47
LINCMD1-201ENST00000418518 INAFM2P0DMQ5 153 aa5.88□□□□□ -1.47
LINCMD1-201ENST00000418518 TTC32Q5I0X7 151 aa5.88□□□□□ -1.47
LINCMD1-201ENST00000418518 DIRC1Q969H9 104 aa5.88□□□□□ -1.47
LINCMD1-201ENST00000418518 ORMDL1Q9P0S3 153 aa5.88□□□□□ -1.47
LINCMD1-201ENST00000418518 STARD9Q9P2P6 4700 aa5.88□□□□□ -1.47
LINCMD1-201ENST00000418518 CNBPP62633 177 aaKnown RBP5.87□□□□□ -1.47
LINCMD1-201ENST00000418518 GAGE2EQ4V326 116 aa5.87□□□□□ -1.47
LINCMD1-201ENST00000418518 SIGMAR1Q99720 223 aa5.87□□□□□ -1.47
LINCMD1-201ENST00000418518 GAGE2DQ9UEU5 116 aa5.87□□□□□ -1.47
LINCMD1-201ENST00000418518 LYSTQ99698 3801 aa5.86□□□□□ -1.47
LINCMD1-201ENST00000418518 LOC107984640A0A0U1RRK4 108 aa5.86□□□□□ -1.47
LINCMD1-201ENST00000418518 ZNF73O43830 326 aaPredicted RBP5.86□□□□□ -1.47
LINCMD1-201ENST00000418518 SNCGO76070 127 aa5.86□□□□□ -1.47
LINCMD1-201ENST00000418518 ELOF1P60002 83 aaKnown RBP5.86□□□□□ -1.47
LINCMD1-201ENST00000418518 H3BQ85 93 aa5.85□□□□□ -1.47
LINCMD1-201ENST00000418518 ACYP1P07311 99 aa5.85□□□□□ -1.47
LINCMD1-201ENST00000418518 SCGB1A1P11684 91 aa5.85□□□□□ -1.47
LINCMD1-201ENST00000418518 C14orf177Q52M58 125 aa5.85□□□□□ -1.47
LINCMD1-201ENST00000418518 KCNQ1DNQ9H478 68 aa5.85□□□□□ -1.47
LINCMD1-201ENST00000418518 NBDYA0A0U1RRE5 68 aa5.84□□□□□ -1.47
LINCMD1-201ENST00000418518 hADV29S1A0JD25 119 aa5.84□□□□□ -1.47
LINCMD1-201ENST00000418518 TMEM256-PLSCR3K7ERE1 68 aa5.84□□□□□ -1.47
LINCMD1-201ENST00000418518 COX7BP24311 80 aa5.84□□□□□ -1.47
LINCMD1-201ENST00000418518 SERTAD4-AS1Q5TG53 156 aa5.84□□□□□ -1.47
LINCMD1-201ENST00000418518 SDIM1Q6ZPB5 146 aa5.84□□□□□ -1.47
LINCMD1-201ENST00000418518 C7orf33Q8WU49 177 aa5.84□□□□□ -1.47
LINCMD1-201ENST00000418518 MEGF8Q7Z7M0 2845 aa5.84□□□□□ -1.48
LINCMD1-201ENST00000418518 DNAH17Q9UFH2 4485 aa5.83□□□□□ -1.48
LINCMD1-201ENST00000418518 XGP55808 180 aa5.83□□□□□ -1.48
LINCMD1-201ENST00000418518 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.83□□□□□ -1.48
LINCMD1-201ENST00000418518 Q6ZRN7 208 aaPredicted RBP5.83□□□□□ -1.48
LINCMD1-201ENST00000418518 KRTAP7-1Q8IUC3 87 aa5.83□□□□□ -1.48
LINCMD1-201ENST00000418518 LINC00528Q8N1L1 170 aa5.83□□□□□ -1.48
LINCMD1-201ENST00000418518 NKAPP1Q8N9T2 125 aa5.83□□□□□ -1.48
LINCMD1-201ENST00000418518 PRYO14603 147 aa5.82□□□□□ -1.48
LINCMD1-201ENST00000418518 SPRR1AP35321 89 aa5.82□□□□□ -1.48
LINCMD1-201ENST00000418518 ALMS1Q8TCU4 4167 aa5.81□□□□□ -1.48
LINCMD1-201ENST00000418518 LRCOL1A6NCL2 159 aa5.81□□□□□ -1.48
LINCMD1-201ENST00000418518 C16orf90A8MZG2 172 aa5.81□□□□□ -1.48
LINCMD1-201ENST00000418518 KRTAP4-16G5E9R7 235 aaPredicted RBP5.81□□□□□ -1.48
LINCMD1-201ENST00000418518 JMJD7-PLA2G4BH0Y9G9 81 aa5.81□□□□□ -1.48
LINCMD1-201ENST00000418518 PSCAO43653 123 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms