RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PSPHP1O15172 72 aa7.85□□□□□ -1.15
PTCH1-205ENST00000418258 SMIM26A0A096LP01 95 aa7.84□□□□□ -1.15
PTCH1-205ENST00000418258 CHTF8P0CG12 524 aa7.84□□□□□ -1.15
PTCH1-205ENST00000418258 COL4A2P08572 1712 aa7.83□□□□□ -1.16
PTCH1-205ENST00000418258 TYMSOSQ8TAI1 123 aa7.83□□□□□ -1.16
PTCH1-205ENST00000418258 KIAA0087Q14695 138 aa7.83□□□□□ -1.16
PTCH1-205ENST00000418258 C1orf195Q5TG92 126 aa7.81□□□□□ -1.16
PTCH1-205ENST00000418258 C1orf64Q8NEQ6 169 aa7.81□□□□□ -1.16
PTCH1-205ENST00000418258 J3QL48 77 aa7.81□□□□□ -1.16
PTCH1-205ENST00000418258 RTL8CO15255 209 aa7.81□□□□□ -1.16
PTCH1-205ENST00000418258 PLA2G1BP04054 148 aaKnown RBP7.8□□□□□ -1.16
PTCH1-205ENST00000418258 DNAH12Q6ZR08 3092 aa7.8□□□□□ -1.16
PTCH1-205ENST00000418258 URB1-AS1Q96HZ7 61 aa7.79□□□□□ -1.16
PTCH1-205ENST00000418258 LINC00167Q96N53 147 aa7.79□□□□□ -1.16
PTCH1-205ENST00000418258 CEP295Q9C0D2 2601 aa7.79□□□□□ -1.16
PTCH1-205ENST00000418258 PHF5AQ7RTV0 110 aaKnown RBP7.79□□□□□ -1.16
PTCH1-205ENST00000418258 LINC00315P59091 139 aa7.79□□□□□ -1.16
PTCH1-205ENST00000418258 COX8CQ7Z4L0 72 aa7.79□□□□□ -1.16
PTCH1-205ENST00000418258 Q9UF83 564 aa7.79□□□□□ -1.16
PTCH1-205ENST00000418258 USP24Q9UPU5 2620 aa7.78□□□□□ -1.16
PTCH1-205ENST00000418258 LINC00313P59037 77 aa7.78□□□□□ -1.16
PTCH1-205ENST00000418258 C11orf72Q8NBR9 251 aa7.78□□□□□ -1.16
PTCH1-205ENST00000418258 UTRNP46939 3433 aa7.77□□□□□ -1.16
PTCH1-205ENST00000418258 KRTAP24-1Q3LI83 254 aa7.77□□□□□ -1.17
PTCH1-205ENST00000418258 KIF25-AS1Q9Y6Z4 181 aa7.77□□□□□ -1.17
PTCH1-205ENST00000418258 Q6ZRP5 223 aa7.77□□□□□ -1.17
PTCH1-205ENST00000418258 CXCL6P80162 114 aa7.76□□□□□ -1.17
PTCH1-205ENST00000418258 C6orf48Q9UBA6 75 aa7.76□□□□□ -1.17
PTCH1-205ENST00000418258 PRRC2CQ9Y520 2896 aaKnown RBP7.75□□□□□ -1.17
PTCH1-205ENST00000418258 NBDYA0A0U1RRE5 68 aa7.75□□□□□ -1.17
PTCH1-205ENST00000418258 A0A1B0GU69 56 aa7.75□□□□□ -1.17
PTCH1-205ENST00000418258 ACYP2P14621 99 aa7.75□□□□□ -1.17
PTCH1-205ENST00000418258 LINC00846Q9NV44 126 aa7.74□□□□□ -1.17
PTCH1-205ENST00000418258 SMIM29Q86T20 159 aa7.74□□□□□ -1.17
PTCH1-205ENST00000418258 TMEM254Q8TBM7 123 aa7.74□□□□□ -1.17
PTCH1-205ENST00000418258 TP53AIP1Q9HCN2 124 aa7.74□□□□□ -1.17
PTCH1-205ENST00000418258 C10orf142B7Z368 130 aa7.74□□□□□ -1.17
PTCH1-205ENST00000418258 WWC2-AS2Q96NR7 200 aa7.73□□□□□ -1.17
PTCH1-205ENST00000418258 LINC00310P59036 64 aa7.73□□□□□ -1.17
PTCH1-205ENST00000418258 H3BNG1 76 aa7.73□□□□□ -1.17
PTCH1-205ENST00000418258 ATP11AUNQ6ZP68 121 aa7.72□□□□□ -1.17
PTCH1-205ENST00000418258 Q96NJ1 140 aa7.72□□□□□ -1.17
PTCH1-205ENST00000418258 RPL37AP61513 92 aaKnown RBP7.72□□□□□ -1.17
PTCH1-205ENST00000418258 IGHV3OR16-9A0A0B4J2B5 98 aa7.71□□□□□ -1.17
PTCH1-205ENST00000418258 EPM2AB3EWF7 344 aa7.71□□□□□ -1.18
PTCH1-205ENST00000418258 SPATA3Q8NHX4 192 aa7.71□□□□□ -1.18
PTCH1-205ENST00000418258 LINC00588Q9Y4M8 146 aa7.7□□□□□ -1.18
PTCH1-205ENST00000418258 Q8NBF4 154 aa7.7□□□□□ -1.18
PTCH1-205ENST00000418258 A0A096LNJ9 63 aa7.7□□□□□ -1.18
PTCH1-205ENST00000418258 COX6B2Q6YFQ2 88 aa7.68□□□□□ -1.18
PTCH1-205ENST00000418258 LINC00476Q8WZB0 136 aa7.68□□□□□ -1.18
PTCH1-205ENST00000418258 IGLV8-61A0A075B6I0 122 aa7.68□□□□□ -1.18
PTCH1-205ENST00000418258 IGLV5-39A0A0G2JS06 123 aa7.68□□□□□ -1.18
PTCH1-205ENST00000418258 SPAG11AQ6PDA7 123 aa7.67□□□□□ -1.18
PTCH1-205ENST00000418258 Q6ZRX8 168 aa7.66□□□□□ -1.18
PTCH1-205ENST00000418258 ELOF1P60002 83 aaKnown RBP7.66□□□□□ -1.18
PTCH1-205ENST00000418258 Q8NAQ8 132 aa7.66□□□□□ -1.18
PTCH1-205ENST00000418258 BCE1O60756 84 aa7.65□□□□□ -1.18
PTCH1-205ENST00000418258 FAM19A4Q96LR4 140 aa7.65□□□□□ -1.18
PTCH1-205ENST00000418258 ST20-AS1Q8NBB2 130 aa7.62□□□□□ -1.19
PTCH1-205ENST00000418258 FAM168BA1KXE4 195 aa7.62□□□□□ -1.19
PTCH1-205ENST00000418258 GVQW2A0A096LPI5 108 aaPredicted RBP7.61□□□□□ -1.19
PTCH1-205ENST00000418258 C5orf42Q9H799 3197 aa7.61□□□□□ -1.19
PTCH1-205ENST00000418258 TRAV22A0A0B4J277 110 aa7.61□□□□□ -1.19
PTCH1-205ENST00000418258 DNAH10OSP0CZ25 163 aa7.6□□□□□ -1.19
PTCH1-205ENST00000418258 LINC01546A6NGU7 62 aa7.6□□□□□ -1.19
PTCH1-205ENST00000418258 CEP350Q5VT06 3117 aa7.59□□□□□ -1.19
PTCH1-205ENST00000418258 A0A1B0GW54 56 aa7.59□□□□□ -1.19
PTCH1-205ENST00000418258 CDIP1Q9H305 208 aa7.58□□□□□ -1.2
PTCH1-205ENST00000418258 FAM218AQ96MZ4 157 aa7.58□□□□□ -1.2
PTCH1-205ENST00000418258 IGLV5-45A0A087WSX0 123 aa7.57□□□□□ -1.2
PTCH1-205ENST00000418258 Q6ZQT0 140 aa7.57□□□□□ -1.2
PTCH1-205ENST00000418258 CR1P17927 2039 aa7.56□□□□□ -1.2
PTCH1-205ENST00000418258 C9orf92A6NGG3 77 aa7.55□□□□□ -1.2
PTCH1-205ENST00000418258 LINC00304Q8N9R0 145 aa7.54□□□□□ -1.2
PTCH1-205ENST00000418258 SMR3BP02814 79 aaPredicted RBP7.54□□□□□ -1.2
PTCH1-205ENST00000418258 SPINT4Q6UDR6 99 aa7.54□□□□□ -1.2
PTCH1-205ENST00000418258 KRTAP10-11P60412 298 aa7.53□□□□□ -1.2
PTCH1-205ENST00000418258 H3BPC8 53 aa7.53□□□□□ -1.2
PTCH1-205ENST00000418258 LOC110117498A0A087WWA1 95 aa7.53□□□□□ -1.2
PTCH1-205ENST00000418258 K7EIL1 84 aa7.53□□□□□ -1.2
PTCH1-205ENST00000418258 C8orf87E5RJ46 101 aa7.52□□□□□ -1.2
PTCH1-205ENST00000418258 EPG5Q9HCE0 2579 aa7.52□□□□□ -1.21
PTCH1-205ENST00000418258 A8MWP4 228 aa7.52□□□□□ -1.21
PTCH1-205ENST00000418258 TRBV7-4A0A0J9YYF1 115 aa7.51□□□□□ -1.21
PTCH1-205ENST00000418258 SERTAD4-AS1Q5TG53 156 aa7.51□□□□□ -1.21
PTCH1-205ENST00000418258 FLG2Q5D862 2391 aaPredicted RBP7.51□□□□□ -1.21
PTCH1-205ENST00000418258 OBSCN-AS1Q96MR7 158 aa7.5□□□□□ -1.21
PTCH1-205ENST00000418258 PCNTO95613 3336 aa7.5□□□□□ -1.21
PTCH1-205ENST00000418258 MRPL34Q9BQ48 92 aaKnown RBP7.49□□□□□ -1.21
PTCH1-205ENST00000418258 LOC101927531A0A1B0GV80 90 aa7.49□□□□□ -1.21
PTCH1-205ENST00000418258 APLNQ9ULZ1 77 aa7.49□□□□□ -1.21
PTCH1-205ENST00000418258 IGLV6-57P01721 117 aa7.49□□□□□ -1.21
PTCH1-205ENST00000418258 DSCR10P59022 87 aa7.49□□□□□ -1.21
PTCH1-205ENST00000418258 TM2D3Q9BRN9 247 aa7.49□□□□□ -1.21
PTCH1-205ENST00000418258 VPREB1P12018 145 aa7.47□□□□□ -1.21
PTCH1-205ENST00000418258 SSBP3-AS1Q7Z2R9 100 aa7.47□□□□□ -1.21
PTCH1-205ENST00000418258 K7EQZ3 153 aa7.47□□□□□ -1.21
PTCH1-205ENST00000418258 ZNF861PO60384 105 aa7.46□□□□□ -1.22
PTCH1-205ENST00000418258 MGAM2Q2M2H8 2515 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms