RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 Q6JHZ5 121 aa7.96□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 C3orf22Q8N5N4 141 aa7.95□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 UBL5Q9BZL1 73 aa7.95□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 XAGE1AQ9HD64 81 aa7.94□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 RBM3P98179 157 aaKnown RBP7.94□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 LYPD5Q6UWN5 251 aa7.94□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 CAMK2N2Q96S95 79 aa7.94□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 A0A0J9YWU9 116 aa7.93□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 LINC00575Q6W349 94 aa7.93□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 PRR34Q9NV39 138 aa7.93□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 NSD1Q96L73 2696 aaPredicted RBP7.93□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 LINC00167Q96N53 147 aa7.92□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 GHRHP01286 108 aa7.92□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 HIGD2BQ4VC39 106 aa7.92□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 ENHOQ6UWT2 76 aa7.92□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 DIRC1Q969H9 104 aa7.92□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 KPRPQ5T749 579 aaPredicted RBP7.92□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 SMIM20Q8N5G0 67 aa7.92□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 DSCR8Q96T75 97 aa7.92□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 WFDC9Q8NEX5 89 aa7.91□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 TEP1Q99973 2627 aaKnown RBP7.91□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 COX7CP15954 63 aa7.91□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 A0A087WVE0 104 aa7.91□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 Q6ZQY7 126 aa7.9□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 TRAV23DV6A0A075B6W5 121 aa7.9□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 ATP5EP2Q5VTU8 51 aa7.9□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 TENM1Q9UKZ4 2725 aa7.89□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 TRBV10-3A0A0K0K1G6 114 aa7.89□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 OXLD1Q5BKU9 147 aa7.89□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 Q8NDZ9 215 aa7.89□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 WFDC10BQ8IUB3 73 aa7.89□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 C1orf43Q9BWL3 253 aa7.89□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 C6orf48Q9UBA6 75 aa7.89□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 H3BQ85 93 aa7.89□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 GVQW2A0A096LPI5 108 aaPredicted RBP7.88□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 USP17L23D6RBM5 183 aa7.88□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 RETNQ9HD89 108 aa7.88□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 IGLV6-57P01721 117 aa7.88□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 COX7BP24311 80 aa7.87□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 Q6ZTC4 211 aa7.87□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 SVIPQ8NHG7 77 aa7.87□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 IGKV2D-24A0A075B6R9 120 aa7.87□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 ZNF73O43830 326 aaPredicted RBP7.87□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 HAMPP81172 84 aa7.86□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 OTOGQ6ZRI0 2925 aa7.86□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 PDE6GP18545 87 aa7.86□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 SERP2Q8N6R1 65 aa7.86□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 EGFEM1PQ0D2K5 195 aa7.85□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 H3BNG1 76 aa7.85□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 HIVEP1P15822 2718 aa7.84□□□□□ -1.15
CSPG4P3Y-201ENST00000418188 WIPF1O43516 503 aa7.83□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 UPK3BQ9BT76 320 aa7.83□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 M0R378 163 aa7.83□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.83□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 DEFB131BA0A096LNP1 70 aa7.83□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 Q6ZQT0 140 aa7.83□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 Q6ZRU5 148 aa7.83□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 NDUFC2-KCTD14E9PQ53 114 aa7.82□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 CRYGAP11844 174 aa7.82□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 C11orf45Q8TAV5 145 aa7.82□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 FAM19A1Q7Z5A9 133 aa7.81□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 NKAPP1Q8N9T2 125 aa7.81□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 LOC110117498A0A087WWA1 95 aa7.81□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 ESRGQ1W209 222 aa7.81□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 C2orf48Q96LS8 159 aa7.81□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 SYCNQ0VAF6 134 aa7.79□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 F8P00451 2351 aa7.79□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 VPREB1P12018 145 aa7.79□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 ELOF1P60002 83 aaKnown RBP7.79□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 KRTAP10-11P60412 298 aa7.78□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 TRBV7-6A0A0J9YX20 115 aa7.78□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 TRRAPQ9Y4A5 3859 aa7.78□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 Q6ZVQ6 151 aa7.78□□□□□ -1.16
CSPG4P3Y-201ENST00000418188 LINC01556Q5JQF7 62 aa7.77□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 C15orf56Q8N910 161 aa7.77□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 LINC01547P58512 204 aaPredicted RBP7.76□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 J3KT08 172 aa7.75□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 Q6ZRP5 223 aa7.75□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 F8WDY8 70 aa7.75□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 FLNBO75369 2602 aaKnown RBP7.75□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 TMEM258P61165 79 aa7.74□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 DEFB105AQ8NG35 78 aa7.74□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 M0R2N4 97 aa7.74□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 KRTAP26-1Q6PEX3 210 aa7.73□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 C20orf197Q8N268 126 aa7.73□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 SCXQ7RTU7 201 aa7.73□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 LINC00528Q8N1L1 170 aa7.72□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 CXCL6P80162 114 aa7.72□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 MAST4O15021 2626 aa7.71□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 TRBV7-4A0A0J9YYF1 115 aa7.71□□□□□ -1.17
CSPG4P3Y-201ENST00000418188 STAB1Q9NY15 2570 aa7.71□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 KRTAP24-1Q3LI83 254 aa7.7□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 RMI2Q96E14 147 aa7.7□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 TRAV10A0A0B4J240 114 aa7.7□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 NREPQ16612 68 aa7.7□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 ETDCA0A1B0GVM5 59 aa7.69□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 DNAH10OSP0CZ25 163 aa7.69□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 MRAPQ8TCY5 172 aa7.69□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 TRAV7A0A075B6U4 112 aa7.68□□□□□ -1.18
CSPG4P3Y-201ENST00000418188 LOC107984640A0A0U1RRK4 108 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms