RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 PFDN1O60925 122 aa2.89□□□□□ -1.95
GTF3AP1-201ENST00000416942 LGALS3P17931 250 aaKnown RBP2.89□□□□□ -1.95
GTF3AP1-201ENST00000416942 ZNF726P1Q15940 193 aa2.89□□□□□ -1.95
GTF3AP1-201ENST00000416942 SPRR4Q96PI1 79 aa2.89□□□□□ -1.95
GTF3AP1-201ENST00000416942 HIGD2AQ9BW72 106 aa2.89□□□□□ -1.95
GTF3AP1-201ENST00000416942 NKX6-2Q9C056 277 aaPredicted RBP2.89□□□□□ -1.95
GTF3AP1-201ENST00000416942 RPS20P60866 119 aaKnown RBP2.88□□□□□ -1.95
GTF3AP1-201ENST00000416942 AKAP14Q86UN6 197 aa2.88□□□□□ -1.95
GTF3AP1-201ENST00000416942 ST20Q9HBF5 79 aa2.88□□□□□ -1.95
GTF3AP1-201ENST00000416942 F2Z2F3 143 aa2.87□□□□□ -1.95
GTF3AP1-201ENST00000416942 MBP02144 154 aa2.87□□□□□ -1.95
GTF3AP1-201ENST00000416942 FCER1GP30273 86 aa2.87□□□□□ -1.95
GTF3AP1-201ENST00000416942 PPP1R1CQ8WVI7 109 aa2.87□□□□□ -1.95
GTF3AP1-201ENST00000416942 TMEM126AQ9H061 195 aa2.87□□□□□ -1.95
GTF3AP1-201ENST00000416942 TOMM7Q9P0U1 55 aa2.87□□□□□ -1.95
GTF3AP1-201ENST00000416942 TGIF2-C20orf24A0A0A6YYL0 155 aa2.86□□□□□ -1.95
GTF3AP1-201ENST00000416942 A0A1B0GVX0 72 aa2.86□□□□□ -1.95
GTF3AP1-201ENST00000416942 PLA2G10O15496 165 aa2.86□□□□□ -1.95
GTF3AP1-201ENST00000416942 IFNA1P01562 189 aa2.86□□□□□ -1.95
GTF3AP1-201ENST00000416942 IGLV6-57P01721 117 aa2.86□□□□□ -1.95
GTF3AP1-201ENST00000416942 CKS1BP61024 79 aa2.86□□□□□ -1.95
GTF3AP1-201ENST00000416942 RPS29P62273 56 aaKnown RBP2.86□□□□□ -1.95
GTF3AP1-201ENST00000416942 Q5W150 140 aa2.86□□□□□ -1.95
GTF3AP1-201ENST00000416942 SLC25A34Q6PIV7 304 aa2.86□□□□□ -1.95
GTF3AP1-201ENST00000416942 TNFSF18Q9UNG2 199 aa2.86□□□□□ -1.95
GTF3AP1-201ENST00000416942 CSDC2Q9Y534 153 aaKnown RBP2.86□□□□□ -1.95
GTF3AP1-201ENST00000416942 TRBV6-5A0A0K0K1A5 114 aa2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 CTXND1A0A1B0GTU2 59 aa2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 RAB19A4D1S5 217 aa2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 M0R378 163 aa2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 MPC2O95563 127 aa2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 S100A9P06702 114 aaKnown RBP2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 POLR2KP53803 58 aaKnown RBP2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 SERF2P84101 59 aa2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 IFITM3Q01628 133 aa2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 C6orf226Q5I0X4 101 aa2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 TEX261Q6UWH6 196 aa2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 SMIM15Q7Z3B0 74 aa2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 PSMG3Q9BT73 122 aaPredicted RBP2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 GNB1LQ9BYB4 327 aa2.85□□□□□ -1.95
GTF3AP1-201ENST00000416942 TRBV27A0A0K0K1C4 114 aa2.84□□□□□ -1.95
GTF3AP1-201ENST00000416942 XKRY2A2RUG3 117 aa2.84□□□□□ -1.95
GTF3AP1-201ENST00000416942 H2BFSP57053 126 aa2.84□□□□□ -1.95
GTF3AP1-201ENST00000416942 RPL37P61927 97 aaKnown RBP2.84□□□□□ -1.95
GTF3AP1-201ENST00000416942 RPL39P62891 51 aaKnown RBP2.84□□□□□ -1.95
GTF3AP1-201ENST00000416942 SMAGPQ0VAQ4 97 aa2.84□□□□□ -1.95
GTF3AP1-201ENST00000416942 TCTE3Q8IZS6 198 aa2.84□□□□□ -1.95
GTF3AP1-201ENST00000416942 C9orf62Q8N4C0 152 aa2.84□□□□□ -1.95
GTF3AP1-201ENST00000416942 TCEAL7Q9BRU2 100 aa2.84□□□□□ -1.95
GTF3AP1-201ENST00000416942 A0A1B0GV50 99 aa2.83□□□□□ -1.96
GTF3AP1-201ENST00000416942 KANTRA0A1W2PQU2 76 aa2.83□□□□□ -1.96
GTF3AP1-201ENST00000416942 MAP1LC3B2A6NCE7 125 aa2.83□□□□□ -1.96
GTF3AP1-201ENST00000416942 RPL35P42766 123 aaKnown RBP2.83□□□□□ -1.96
GTF3AP1-201ENST00000416942 RAB5BP61020 215 aa2.83□□□□□ -1.96
GTF3AP1-201ENST00000416942 HBBP68871 147 aa2.83□□□□□ -1.96
GTF3AP1-201ENST00000416942 TIMM17AQ99595 171 aa2.83□□□□□ -1.96
GTF3AP1-201ENST00000416942 MAP1LC3BQ9GZQ8 125 aa2.83□□□□□ -1.96
GTF3AP1-201ENST00000416942 ZNF706Q9Y5V0 76 aaPredicted RBP2.83□□□□□ -1.96
GTF3AP1-201ENST00000416942 FXYD6-FXYD2A0A087WZ82 144 aa2.82□□□□□ -1.96
GTF3AP1-201ENST00000416942 BORCS7-ASMTA0A0B4J1R7 106 aa2.82□□□□□ -1.96
GTF3AP1-201ENST00000416942 SMKR1H3BMG3 65 aa2.82□□□□□ -1.96
GTF3AP1-201ENST00000416942 ZNF345Q14585 488 aa2.82□□□□□ -1.96
GTF3AP1-201ENST00000416942 TIMM21Q9BVV7 248 aa2.82□□□□□ -1.96
GTF3AP1-201ENST00000416942 CHTOPQ9Y3Y2 248 aaKnown RBP2.82□□□□□ -1.96
GTF3AP1-201ENST00000416942 C20orf202A1L168 122 aa2.81□□□□□ -1.96
GTF3AP1-201ENST00000416942 HMSDA8MTL9 139 aa2.81□□□□□ -1.96
GTF3AP1-201ENST00000416942 COX19Q49B96 90 aa2.81□□□□□ -1.96
GTF3AP1-201ENST00000416942 CENPWQ5EE01 88 aa2.81□□□□□ -1.96
GTF3AP1-201ENST00000416942 AKR1C8PQ5T2L2 129 aa2.81□□□□□ -1.96
GTF3AP1-201ENST00000416942 HRCT1Q6UXD1 115 aa2.81□□□□□ -1.96
GTF3AP1-201ENST00000416942 SSBP3-AS1Q7Z2R9 100 aa2.81□□□□□ -1.96
GTF3AP1-201ENST00000416942 FAM210AQ96ND0 272 aa2.81□□□□□ -1.96
GTF3AP1-201ENST00000416942 CNFNQ9BYD5 112 aa2.81□□□□□ -1.96
GTF3AP1-201ENST00000416942 GEMIN7Q9H840 131 aaKnown RBP2.81□□□□□ -1.96
GTF3AP1-201ENST00000416942 F8VRH5 84 aa2.8□□□□□ -1.96
GTF3AP1-201ENST00000416942 TEX46H3BTG2 121 aa2.8□□□□□ -1.96
GTF3AP1-201ENST00000416942 ARPC5O15511 151 aa2.8□□□□□ -1.96
GTF3AP1-201ENST00000416942 RAB14P61106 215 aa2.8□□□□□ -1.96
GTF3AP1-201ENST00000416942 UQCC3Q6UW78 93 aa2.8□□□□□ -1.96
GTF3AP1-201ENST00000416942 Q8IZM0 81 aa2.8□□□□□ -1.96
GTF3AP1-201ENST00000416942 SMCR5Q8TEV8 140 aa2.8□□□□□ -1.96
GTF3AP1-201ENST00000416942 MED9Q9NWA0 146 aa2.8□□□□□ -1.96
GTF3AP1-201ENST00000416942 TRBV20OR9-2A0A075B6H5 130 aa2.79□□□□□ -1.96
GTF3AP1-201ENST00000416942 C9orf153Q5TBE3 101 aa2.79□□□□□ -1.96
GTF3AP1-201ENST00000416942 RPL7L1Q6DKI1 246 aaKnown RBP2.79□□□□□ -1.96
GTF3AP1-201ENST00000416942 FAM19A3Q7Z5A8 133 aa2.79□□□□□ -1.96
GTF3AP1-201ENST00000416942 SLC51BQ86UW2 128 aa2.79□□□□□ -1.96
GTF3AP1-201ENST00000416942 SPANXA1Q9NS26 97 aa2.79□□□□□ -1.96
GTF3AP1-201ENST00000416942 UMAD1C9J7I0 102 aa2.78□□□□□ -1.96
GTF3AP1-201ENST00000416942 RAB4AP20338 218 aa2.78□□□□□ -1.96
GTF3AP1-201ENST00000416942 GNG4P50150 75 aa2.78□□□□□ -1.96
GTF3AP1-201ENST00000416942 MRPS36P82909 103 aaKnown RBP2.78□□□□□ -1.96
GTF3AP1-201ENST00000416942 NDUFA5Q16718 116 aa2.78□□□□□ -1.96
GTF3AP1-201ENST00000416942 FAM231DQ6ZW35 169 aa2.78□□□□□ -1.96
GTF3AP1-201ENST00000416942 AMN1Q8IY45 258 aa2.78□□□□□ -1.96
GTF3AP1-201ENST00000416942 KCNRGQ8N5I3 272 aa2.78□□□□□ -1.96
GTF3AP1-201ENST00000416942 C20orf166-AS1Q96NR2 134 aa2.78□□□□□ -1.96
GTF3AP1-201ENST00000416942 KRTAP2-1Q9BYU5 128 aa2.78□□□□□ -1.96
GTF3AP1-201ENST00000416942 SFT2D1Q8WV19 159 aa2.77□□□□□ -1.97
GTF3AP1-201ENST00000416942 TCAPO15273 167 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms