RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 Q9BRP9 147 aa8.2□□□□□ -1.1
PTPRF-205ENST00000414879 C20orf197Q8N268 126 aa8.2□□□□□ -1.1
PTPRF-205ENST00000414879 PRR3P79522 188 aaKnown RBP8.2□□□□□ -1.1
PTPRF-205ENST00000414879 CASC2Q6XLA1 102 aa8.19□□□□□ -1.1
PTPRF-205ENST00000414879 C6orf48Q9UBA6 75 aa8.19□□□□□ -1.1
PTPRF-205ENST00000414879 KRTAP1-1Q07627 177 aa8.19□□□□□ -1.1
PTPRF-205ENST00000414879 SCXQ7RTU7 201 aa8.19□□□□□ -1.1
PTPRF-205ENST00000414879 LIMD2Q9BT23 127 aa8.19□□□□□ -1.1
PTPRF-205ENST00000414879 LINC00588Q9Y4M8 146 aa8.18□□□□□ -1.1
PTPRF-205ENST00000414879 LAMA1P25391 3075 aa8.16□□□□□ -1.1
PTPRF-205ENST00000414879 SPINK6Q6UWN8 80 aa8.16□□□□□ -1.1
PTPRF-205ENST00000414879 FAM236DA0A1B0GTK5 79 aa8.16□□□□□ -1.1
PTPRF-205ENST00000414879 C16orf90A8MZG2 172 aa8.16□□□□□ -1.1
PTPRF-205ENST00000414879 FAM236CP0DP71 79 aa8.16□□□□□ -1.1
PTPRF-205ENST00000414879 COX7CP15954 63 aa8.15□□□□□ -1.1
PTPRF-205ENST00000414879 V9GYY9 64 aa8.15□□□□□ -1.1
PTPRF-205ENST00000414879 TRAV7A0A075B6U4 112 aa8.15□□□□□ -1.11
PTPRF-205ENST00000414879 SMCR5Q8TEV8 140 aa8.15□□□□□ -1.11
PTPRF-205ENST00000414879 LINC00167Q96N53 147 aa8.14□□□□□ -1.11
PTPRF-205ENST00000414879 ZNF292O60281 2723 aa8.13□□□□□ -1.11
PTPRF-205ENST00000414879 ELOF1P60002 83 aaKnown RBP8.13□□□□□ -1.11
PTPRF-205ENST00000414879 WFDC13Q8IUB5 93 aa8.13□□□□□ -1.11
PTPRF-205ENST00000414879 K7EIL1 84 aa8.13□□□□□ -1.11
PTPRF-205ENST00000414879 XGP55808 180 aa8.13□□□□□ -1.11
PTPRF-205ENST00000414879 PRR34Q9NV39 138 aa8.13□□□□□ -1.11
PTPRF-205ENST00000414879 CXCL6P80162 114 aa8.12□□□□□ -1.11
PTPRF-205ENST00000414879 GIG44P09565 113 aaPredicted RBP8.12□□□□□ -1.11
PTPRF-205ENST00000414879 TM2D3Q9BRN9 247 aa8.12□□□□□ -1.11
PTPRF-205ENST00000414879 Q9UF83 564 aa8.12□□□□□ -1.11
PTPRF-205ENST00000414879 CIRBP-AS1Q8TBR5 109 aa8.11□□□□□ -1.11
PTPRF-205ENST00000414879 KRTAP10-3P60369 221 aa8.11□□□□□ -1.11
PTPRF-205ENST00000414879 HRCT1Q6UXD1 115 aa8.11□□□□□ -1.11
PTPRF-205ENST00000414879 SPTSSBQ8NFR3 76 aa8.11□□□□□ -1.11
PTPRF-205ENST00000414879 KRTAP10-11P60412 298 aa8.1□□□□□ -1.11
PTPRF-205ENST00000414879 Q8N9L7 120 aa8.1□□□□□ -1.11
PTPRF-205ENST00000414879 USP34Q70CQ2 3546 aa8.1□□□□□ -1.11
PTPRF-205ENST00000414879 BCE1O60756 84 aa8.09□□□□□ -1.11
PTPRF-205ENST00000414879 COL6A3P12111 3177 aa8.09□□□□□ -1.11
PTPRF-205ENST00000414879 WIPF1O43516 503 aa8.09□□□□□ -1.11
PTPRF-205ENST00000414879 Q6ZRX8 168 aa8.09□□□□□ -1.11
PTPRF-205ENST00000414879 PRR15LQ9BU68 103 aa8.09□□□□□ -1.11
PTPRF-205ENST00000414879 A0A087WSZ3 146 aa8.08□□□□□ -1.12
PTPRF-205ENST00000414879 Q6ZRP5 223 aa8.08□□□□□ -1.12
PTPRF-205ENST00000414879 RTL8CO15255 209 aa8.08□□□□□ -1.12
PTPRF-205ENST00000414879 SOSTDC1Q6X4U4 206 aa8.08□□□□□ -1.12
PTPRF-205ENST00000414879 Q6ZVQ6 151 aa8.08□□□□□ -1.12
PTPRF-205ENST00000414879 PRLHP81277 87 aa8.07□□□□□ -1.12
PTPRF-205ENST00000414879 C5orf47Q569G3 176 aa8.07□□□□□ -1.12
PTPRF-205ENST00000414879 LOC110117498A0A087WWA1 95 aa8.05□□□□□ -1.12
PTPRF-205ENST00000414879 LITAFQ99732 161 aa8.05□□□□□ -1.12
PTPRF-205ENST00000414879 KIAA0087Q14695 138 aa8.05□□□□□ -1.12
PTPRF-205ENST00000414879 IGLV6-57P01721 117 aa8.05□□□□□ -1.12
PTPRF-205ENST00000414879 VCANP13611 3396 aa8.04□□□□□ -1.12
PTPRF-205ENST00000414879 HECTD1Q9ULT8 2610 aa8.04□□□□□ -1.12
PTPRF-205ENST00000414879 TRBV7-7A0A0K0K1E9 115 aa8.04□□□□□ -1.12
PTPRF-205ENST00000414879 VPREB1P12018 145 aa8.04□□□□□ -1.12
PTPRF-205ENST00000414879 Q8N3U1 123 aa8.04□□□□□ -1.12
PTPRF-205ENST00000414879 TLX1NBP0CAT3 122 aa8.03□□□□□ -1.12
PTPRF-205ENST00000414879 PLA2G2DQ9UNK4 145 aa8.03□□□□□ -1.12
PTPRF-205ENST00000414879 Q8NBF4 154 aa8.03□□□□□ -1.12
PTPRF-205ENST00000414879 LINC01547P58512 204 aaPredicted RBP8.02□□□□□ -1.13
PTPRF-205ENST00000414879 FAM229AH3BQW9 127 aa8.02□□□□□ -1.13
PTPRF-205ENST00000414879 LINC00846Q9NV44 126 aa8.02□□□□□ -1.13
PTPRF-205ENST00000414879 HCG22E2RYF7 251 aa8.02□□□□□ -1.13
PTPRF-205ENST00000414879 IGHV6-1A0A0B4J1U7 121 aa8.01□□□□□ -1.13
PTPRF-205ENST00000414879 TP53AIP1Q9HCN2 124 aa8.01□□□□□ -1.13
PTPRF-205ENST00000414879 CRYGAP11844 174 aa8.01□□□□□ -1.13
PTPRF-205ENST00000414879 KCNQ1DNQ9H478 68 aa8.01□□□□□ -1.13
PTPRF-205ENST00000414879 K7ERS5 55 aa8□□□□□ -1.13
PTPRF-205ENST00000414879 FAM30AQ9NZY2 134 aa7.99□□□□□ -1.13
PTPRF-205ENST00000414879 PRO0461Q9UI25 63 aa7.99□□□□□ -1.13
PTPRF-205ENST00000414879 hDV103S1A0JD37 113 aa7.98□□□□□ -1.13
PTPRF-205ENST00000414879 EPM2AB3EWF7 344 aa7.98□□□□□ -1.13
PTPRF-205ENST00000414879 LINC00208Q96KT6 92 aa7.98□□□□□ -1.13
PTPRF-205ENST00000414879 PHF5AQ7RTV0 110 aaKnown RBP7.97□□□□□ -1.13
PTPRF-205ENST00000414879 SERP1Q9Y6X1 66 aa7.97□□□□□ -1.13
PTPRF-205ENST00000414879 IGLV1-50A0A075B6I6 118 aa7.96□□□□□ -1.13
PTPRF-205ENST00000414879 Q6ZQT0 140 aa7.96□□□□□ -1.13
PTPRF-205ENST00000414879 SNURFQ9Y675 71 aa7.96□□□□□ -1.13
PTPRF-205ENST00000414879 HELZ2Q9BYK8 2649 aaKnown RBP7.96□□□□□ -1.13
PTPRF-205ENST00000414879 TRBV7-4A0A0J9YYF1 115 aa7.96□□□□□ -1.14
PTPRF-205ENST00000414879 FAM218AQ96MZ4 157 aa7.96□□□□□ -1.14
PTPRF-205ENST00000414879 H3BPC8 53 aa7.95□□□□□ -1.14
PTPRF-205ENST00000414879 LINC00336Q6ZUF6 198 aa7.95□□□□□ -1.14
PTPRF-205ENST00000414879 PLA2G1BP04054 148 aaKnown RBP7.95□□□□□ -1.14
PTPRF-205ENST00000414879 AKAP13Q12802 2813 aa7.95□□□□□ -1.14
PTPRF-205ENST00000414879 RPL37AP61513 92 aaKnown RBP7.95□□□□□ -1.14
PTPRF-205ENST00000414879 C15orf56Q8N910 161 aa7.95□□□□□ -1.14
PTPRF-205ENST00000414879 C9orf163Q8N9P6 203 aa7.95□□□□□ -1.14
PTPRF-205ENST00000414879 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
PTPRF-205ENST00000414879 MOBPQ13875 183 aa7.94□□□□□ -1.14
PTPRF-205ENST00000414879 APLNQ9ULZ1 77 aa7.94□□□□□ -1.14
PTPRF-205ENST00000414879 CNBPP62633 177 aaKnown RBP7.94□□□□□ -1.14
PTPRF-205ENST00000414879 LINC00476Q8WZB0 136 aa7.94□□□□□ -1.14
PTPRF-205ENST00000414879 A0A087WVE0 104 aa7.93□□□□□ -1.14
PTPRF-205ENST00000414879 SMIM26A0A096LP01 95 aa7.93□□□□□ -1.14
PTPRF-205ENST00000414879 PRRC2CQ9Y520 2896 aaKnown RBP7.93□□□□□ -1.14
PTPRF-205ENST00000414879 H0Y9P7 68 aa7.93□□□□□ -1.14
PTPRF-205ENST00000414879 FLNAP21333 2647 aaKnown RBP7.92□□□□□ -1.14
PTPRF-205ENST00000414879 LINC00528Q8N1L1 170 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms