RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 C12orf57Q99622 126 aa8.59□□□□□ -1.03
RAPGEF1-204ENST00000414781 SCGB1D4Q6XE38 83 aa8.58□□□□□ -1.04
RAPGEF1-204ENST00000414781 MEIG1Q5JSS6 88 aa8.57□□□□□ -1.04
RAPGEF1-204ENST00000414781 SLC25A34Q6PIV7 304 aa8.57□□□□□ -1.04
RAPGEF1-204ENST00000414781 PCP2Q8IVA1 136 aa8.57□□□□□ -1.04
RAPGEF1-204ENST00000414781 BOD1L2Q8IYS8 172 aa8.57□□□□□ -1.04
RAPGEF1-204ENST00000414781 LINC00518Q8N0U6 118 aa8.57□□□□□ -1.04
RAPGEF1-204ENST00000414781 C14orf144Q96I85 54 aa8.57□□□□□ -1.04
RAPGEF1-204ENST00000414781 SLPIP03973 132 aa8.56□□□□□ -1.04
RAPGEF1-204ENST00000414781 C10orf25Q5T742 122 aa8.56□□□□□ -1.04
RAPGEF1-204ENST00000414781 C9orf163Q8N9P6 203 aa8.56□□□□□ -1.04
RAPGEF1-204ENST00000414781 C6orf48Q9UBA6 75 aa8.56□□□□□ -1.04
RAPGEF1-204ENST00000414781 ERG28Q9UKR5 140 aa8.56□□□□□ -1.04
RAPGEF1-204ENST00000414781 A0A0J9YXY3 114 aa8.55□□□□□ -1.04
RAPGEF1-204ENST00000414781 TIMM17BO60830 172 aa8.55□□□□□ -1.04
RAPGEF1-204ENST00000414781 UQCR10Q9UDW1 63 aa8.55□□□□□ -1.04
RAPGEF1-204ENST00000414781 TLX1NBP0CAT3 122 aa8.54□□□□□ -1.04
RAPGEF1-204ENST00000414781 LINC00158P58513 81 aa8.54□□□□□ -1.04
RAPGEF1-204ENST00000414781 TTTY13Q9BZ97 58 aa8.54□□□□□ -1.04
RAPGEF1-204ENST00000414781 LOC107984640A0A0U1RRK4 108 aa8.53□□□□□ -1.04
RAPGEF1-204ENST00000414781 TMEM238C9JI98 176 aa8.53□□□□□ -1.04
RAPGEF1-204ENST00000414781 NDUFC2-KCTD14E9PQ53 114 aa8.53□□□□□ -1.04
RAPGEF1-204ENST00000414781 TSTD3H0UI37 97 aa8.53□□□□□ -1.04
RAPGEF1-204ENST00000414781 PFN2P35080 140 aa8.53□□□□□ -1.04
RAPGEF1-204ENST00000414781 Q6ZVH6 145 aa8.53□□□□□ -1.04
RAPGEF1-204ENST00000414781 COPS9Q8WXC6 57 aa8.53□□□□□ -1.04
RAPGEF1-204ENST00000414781 LPAP08519 4548 aa8.52□□□□□ -1.04
RAPGEF1-204ENST00000414781 LCE2AQ5TA79 106 aaPredicted RBP8.52□□□□□ -1.05
RAPGEF1-204ENST00000414781 SMIM13P0DJ93 91 aa8.51□□□□□ -1.05
RAPGEF1-204ENST00000414781 KRTAP10-8P60410 259 aa8.51□□□□□ -1.05
RAPGEF1-204ENST00000414781 C9orf116Q5BN46 136 aaPredicted RBP8.51□□□□□ -1.05
RAPGEF1-204ENST00000414781 MIEN1Q9BRT3 115 aa8.51□□□□□ -1.05
RAPGEF1-204ENST00000414781 HIGD1BQ9P298 99 aa8.51□□□□□ -1.05
RAPGEF1-204ENST00000414781 LINC00474Q9P2X8 69 aa8.51□□□□□ -1.05
RAPGEF1-204ENST00000414781 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.05
RAPGEF1-204ENST00000414781 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.5□□□□□ -1.05
RAPGEF1-204ENST00000414781 A0A0U1RRA0 63 aa8.49□□□□□ -1.05
RAPGEF1-204ENST00000414781 RPL18AQ02543 176 aaKnown RBP8.49□□□□□ -1.05
RAPGEF1-204ENST00000414781 SDIM1Q6ZPB5 146 aa8.49□□□□□ -1.05
RAPGEF1-204ENST00000414781 PRO1933Q9H354 126 aa8.49□□□□□ -1.05
RAPGEF1-204ENST00000414781 IFITM1P13164 125 aa8.48□□□□□ -1.05
RAPGEF1-204ENST00000414781 MIR7-3HGQ8N6C7 128 aa8.48□□□□□ -1.05
RAPGEF1-204ENST00000414781 SPANXB1Q9NS25 103 aaPredicted RBP8.48□□□□□ -1.05
RAPGEF1-204ENST00000414781 GAGE2BQ13066 116 aa8.47□□□□□ -1.05
RAPGEF1-204ENST00000414781 GAGE2EQ4V326 116 aa8.47□□□□□ -1.05
RAPGEF1-204ENST00000414781 REG3GQ6UW15 175 aa8.47□□□□□ -1.05
RAPGEF1-204ENST00000414781 Q6ZRP5 223 aa8.47□□□□□ -1.05
RAPGEF1-204ENST00000414781 SPANXDQ9BXN6 97 aa8.47□□□□□ -1.05
RAPGEF1-204ENST00000414781 SPANXCQ9NY87 97 aa8.47□□□□□ -1.05
RAPGEF1-204ENST00000414781 GAGE2DQ9UEU5 116 aa8.47□□□□□ -1.05
RAPGEF1-204ENST00000414781 PTTG1IPP53801 180 aa8.46□□□□□ -1.06
RAPGEF1-204ENST00000414781 TAL2Q16559 108 aa8.46□□□□□ -1.06
RAPGEF1-204ENST00000414781 ADAMTSL4-AS1Q5T5F5 129 aa8.46□□□□□ -1.06
RAPGEF1-204ENST00000414781 DPH3Q96FX2 82 aa8.46□□□□□ -1.06
RAPGEF1-204ENST00000414781 HIST1H4GQ99525 98 aa8.46□□□□□ -1.06
RAPGEF1-204ENST00000414781 LITAFQ99732 161 aa8.46□□□□□ -1.06
RAPGEF1-204ENST00000414781 PPDPFQ9H3Y8 114 aa8.46□□□□□ -1.06
RAPGEF1-204ENST00000414781 SND1-IT1Q9HBX3 110 aa8.46□□□□□ -1.06
RAPGEF1-204ENST00000414781 C7orf33Q8WU49 177 aa8.45□□□□□ -1.06
RAPGEF1-204ENST00000414781 LOC107984156A0A0G2JMH3 177 aa8.44□□□□□ -1.06
RAPGEF1-204ENST00000414781 PANO1I0J062 215 aa8.44□□□□□ -1.06
RAPGEF1-204ENST00000414781 RPL24P83731 157 aaKnown RBP8.44□□□□□ -1.06
RAPGEF1-204ENST00000414781 C2orf91Q6ZV80 131 aa8.44□□□□□ -1.06
RAPGEF1-204ENST00000414781 ARL17AQ8IVW1 177 aa8.44□□□□□ -1.06
RAPGEF1-204ENST00000414781 TP73-AS1Q9UF72 201 aa8.44□□□□□ -1.06
RAPGEF1-204ENST00000414781 DAND5Q8N907 189 aa8.43□□□□□ -1.06
RAPGEF1-204ENST00000414781 LINC00308Q8TCZ7 52 aa8.43□□□□□ -1.06
RAPGEF1-204ENST00000414781 XAGE1AQ9HD64 81 aa8.43□□□□□ -1.06
RAPGEF1-204ENST00000414781 A0A096LNI7 61 aa8.42□□□□□ -1.06
RAPGEF1-204ENST00000414781 IGKV2-24A0A0C4DH68 120 aa8.42□□□□□ -1.06
RAPGEF1-204ENST00000414781 HSD52Q0P140 79 aa8.42□□□□□ -1.06
RAPGEF1-204ENST00000414781 MUSTN1Q8IVN3 82 aa8.41□□□□□ -1.06
RAPGEF1-204ENST00000414781 NDUFC2O95298 119 aa8.4□□□□□ -1.06
RAPGEF1-204ENST00000414781 C9orf129Q5T035 196 aaKnown RBP8.4□□□□□ -1.06
RAPGEF1-204ENST00000414781 SPINK6Q6UWN8 80 aa8.4□□□□□ -1.06
RAPGEF1-204ENST00000414781 TMEM238LA0A1B0GVL6 79 aa8.39□□□□□ -1.07
RAPGEF1-204ENST00000414781 A6NJY4 79 aa8.39□□□□□ -1.07
RAPGEF1-204ENST00000414781 DDTP30046 118 aa8.39□□□□□ -1.07
RAPGEF1-204ENST00000414781 NPC2P61916 151 aa8.39□□□□□ -1.07
RAPGEF1-204ENST00000414781 CEND1Q8N111 149 aa8.39□□□□□ -1.07
RAPGEF1-204ENST00000414781 SPACA4Q8TDM5 124 aa8.39□□□□□ -1.07
RAPGEF1-204ENST00000414781 CRCT1Q9UGL9 99 aa8.39□□□□□ -1.07
RAPGEF1-204ENST00000414781 A0A087WYN8 130 aa8.38□□□□□ -1.07
RAPGEF1-204ENST00000414781 M0R143 59 aa8.38□□□□□ -1.07
RAPGEF1-204ENST00000414781 PRR3P79522 188 aaKnown RBP8.38□□□□□ -1.07
RAPGEF1-204ENST00000414781 NKAPP1Q8N9T2 125 aa8.38□□□□□ -1.07
RAPGEF1-204ENST00000414781 CHTF8P0CG12 524 aa8.37□□□□□ -1.07
RAPGEF1-204ENST00000414781 CTAG1AP78358 180 aa8.37□□□□□ -1.07
RAPGEF1-204ENST00000414781 LBHQ53QV2 105 aaPredicted RBP8.37□□□□□ -1.07
RAPGEF1-204ENST00000414781 SOSTDC1Q6X4U4 206 aa8.37□□□□□ -1.07
RAPGEF1-204ENST00000414781 TRBV10-2A0A0K0K1G8 114 aa8.36□□□□□ -1.07
RAPGEF1-204ENST00000414781 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
RAPGEF1-204ENST00000414781 FSIP2Q5CZC0 6907 aa8.36□□□□□ -1.07
RAPGEF1-204ENST00000414781 IGLV5-37A0A075B6J1 123 aa8.35□□□□□ -1.07
RAPGEF1-204ENST00000414781 A4D1N5 150 aa8.35□□□□□ -1.07
RAPGEF1-204ENST00000414781 M0R378 163 aa8.35□□□□□ -1.07
RAPGEF1-204ENST00000414781 VPREB1P12018 145 aa8.35□□□□□ -1.07
RAPGEF1-204ENST00000414781 CBY1Q9Y3M2 126 aa8.35□□□□□ -1.07
RAPGEF1-204ENST00000414781 C22orf24Q9Y442 160 aa8.34□□□□□ -1.07
RAPGEF1-204ENST00000414781 TRAV13-2A0A0B4J235 113 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms