RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 COX17Q14061 63 aa6.58□□□□□ -1.36
HLA-DMB-257ENST00000414017 PHF5AQ7RTV0 110 aaKnown RBP6.58□□□□□ -1.36
HLA-DMB-257ENST00000414017 C7orf33Q8WU49 177 aa6.58□□□□□ -1.36
HLA-DMB-257ENST00000414017 EPM2AB3EWF7 344 aa6.57□□□□□ -1.36
HLA-DMB-257ENST00000414017 M0QXV9 152 aa6.57□□□□□ -1.36
HLA-DMB-257ENST00000414017 SERTAD4-AS1Q5TG53 156 aa6.57□□□□□ -1.36
HLA-DMB-257ENST00000414017 Q5VSD8 79 aa6.57□□□□□ -1.36
HLA-DMB-257ENST00000414017 MIR7-3HGQ8N6C7 128 aa6.57□□□□□ -1.36
HLA-DMB-257ENST00000414017 DAND5Q8N907 189 aa6.57□□□□□ -1.36
HLA-DMB-257ENST00000414017 SND1-IT1Q9HBX3 110 aa6.57□□□□□ -1.36
HLA-DMB-257ENST00000414017 LINC00587B1AMM8 73 aa6.56□□□□□ -1.36
HLA-DMB-257ENST00000414017 RPL37AP61513 92 aaKnown RBP6.56□□□□□ -1.36
HLA-DMB-257ENST00000414017 NPC2P61916 151 aa6.56□□□□□ -1.36
HLA-DMB-257ENST00000414017 Q8N1X5 172 aa6.56□□□□□ -1.36
HLA-DMB-257ENST00000414017 KRTAP17-1Q9BYP8 105 aa6.56□□□□□ -1.36
HLA-DMB-257ENST00000414017 A0A0J9YXY3 114 aa6.55□□□□□ -1.36
HLA-DMB-257ENST00000414017 UBE2BP63146 152 aa6.55□□□□□ -1.36
HLA-DMB-257ENST00000414017 SCGB1D4Q6XE38 83 aa6.55□□□□□ -1.36
HLA-DMB-257ENST00000414017 PCP2Q8IVA1 136 aa6.55□□□□□ -1.36
HLA-DMB-257ENST00000414017 NKAPP1Q8N9T2 125 aa6.55□□□□□ -1.36
HLA-DMB-257ENST00000414017 VPS13BQ7Z7G8 4022 aa6.54□□□□□ -1.36
HLA-DMB-257ENST00000414017 GAGE10A6NGK3 116 aa6.54□□□□□ -1.36
HLA-DMB-257ENST00000414017 KRTAP7-1Q8IUC3 87 aa6.54□□□□□ -1.36
HLA-DMB-257ENST00000414017 C22orf24Q9Y442 160 aa6.54□□□□□ -1.36
HLA-DMB-257ENST00000414017 PLA2G1BP04054 148 aaKnown RBP6.53□□□□□ -1.36
HLA-DMB-257ENST00000414017 JOSD1Q15040 202 aaPredicted RBP6.53□□□□□ -1.36
HLA-DMB-257ENST00000414017 BOD1L2Q8IYS8 172 aa6.53□□□□□ -1.36
HLA-DMB-257ENST00000414017 MIEN1Q9BRT3 115 aa6.53□□□□□ -1.36
HLA-DMB-257ENST00000414017 PAM16Q9Y3D7 125 aa6.53□□□□□ -1.36
HLA-DMB-257ENST00000414017 RPL24P83731 157 aaKnown RBP6.52□□□□□ -1.37
HLA-DMB-257ENST00000414017 ADAMTSL4-AS1Q5T5F5 129 aa6.52□□□□□ -1.37
HLA-DMB-257ENST00000414017 VAMP8Q9BV40 100 aa6.52□□□□□ -1.37
HLA-DMB-257ENST00000414017 KRTAP4-5Q9BYR2 181 aa6.52□□□□□ -1.37
HLA-DMB-257ENST00000414017 RPL37AP8A6NKH3 93 aa6.51□□□□□ -1.37
HLA-DMB-257ENST00000414017 NCR3O14931 201 aa6.51□□□□□ -1.37
HLA-DMB-257ENST00000414017 SPATA45Q537H7 98 aa6.51□□□□□ -1.37
HLA-DMB-257ENST00000414017 LBHQ53QV2 105 aaPredicted RBP6.51□□□□□ -1.37
HLA-DMB-257ENST00000414017 MRPL55Q7Z7F7 128 aaKnown RBP6.51□□□□□ -1.37
HLA-DMB-257ENST00000414017 VPREB1P12018 145 aa6.5□□□□□ -1.37
HLA-DMB-257ENST00000414017 PYY3Q5JQD4 70 aa6.5□□□□□ -1.37
HLA-DMB-257ENST00000414017 Q8NDZ9 215 aa6.5□□□□□ -1.37
HLA-DMB-257ENST00000414017 TP73-AS1Q9UF72 201 aa6.5□□□□□ -1.37
HLA-DMB-257ENST00000414017 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
HLA-DMB-257ENST00000414017 IGKV2-28A0A075B6P5 120 aa6.49□□□□□ -1.37
HLA-DMB-257ENST00000414017 TMEM238C9JI98 176 aa6.49□□□□□ -1.37
HLA-DMB-257ENST00000414017 IGKV2D-28P01615 120 aa6.49□□□□□ -1.37
HLA-DMB-257ENST00000414017 PRR3P79522 188 aaKnown RBP6.49□□□□□ -1.37
HLA-DMB-257ENST00000414017 C1orf137Q5JT78 98 aa6.49□□□□□ -1.37
HLA-DMB-257ENST00000414017 KRTAP11-1Q8IUC1 163 aa6.49□□□□□ -1.37
HLA-DMB-257ENST00000414017 C14orf144Q96I85 54 aa6.49□□□□□ -1.37
HLA-DMB-257ENST00000414017 LINC00167Q96N53 147 aa6.49□□□□□ -1.37
HLA-DMB-257ENST00000414017 PSORS1C2Q9UIG4 136 aa6.49□□□□□ -1.37
HLA-DMB-257ENST00000414017 TIMM17BO60830 172 aa6.48□□□□□ -1.37
HLA-DMB-257ENST00000414017 SOSTDC1Q6X4U4 206 aa6.48□□□□□ -1.37
HLA-DMB-257ENST00000414017 LITAFQ99732 161 aa6.48□□□□□ -1.37
HLA-DMB-257ENST00000414017 IGLV5-37A0A075B6J1 123 aa6.47□□□□□ -1.37
HLA-DMB-257ENST00000414017 INAFM2P0DMQ5 153 aa6.47□□□□□ -1.37
HLA-DMB-257ENST00000414017 LINC00308Q8TCZ7 52 aa6.47□□□□□ -1.37
HLA-DMB-257ENST00000414017 PKHD1L1Q86WI1 4243 aa6.47□□□□□ -1.37
HLA-DMB-257ENST00000414017 M0R378 163 aa6.46□□□□□ -1.38
HLA-DMB-257ENST00000414017 EIF4EBP3O60516 100 aaPredicted RBP6.46□□□□□ -1.38
HLA-DMB-257ENST00000414017 COX8AP10176 69 aa6.46□□□□□ -1.38
HLA-DMB-257ENST00000414017 SRSF9Q13242 221 aaKnown RBP eCLIP6.46□□□□□ -1.38
HLA-DMB-257ENST00000414017 SPANXDQ9BXN6 97 aa6.45□□□□□ -1.38
HLA-DMB-257ENST00000414017 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
HLA-DMB-257ENST00000414017 SPANXCQ9NY87 97 aa6.45□□□□□ -1.38
HLA-DMB-257ENST00000414017 ABCA13Q86UQ4 5058 aa6.45□□□□□ -1.38
HLA-DMB-257ENST00000414017 SRRM2Q9UQ35 2752 aaKnown RBP6.45□□□□□ -1.38
HLA-DMB-257ENST00000414017 HNRNPA3P51991 378 aaKnown RBP6.44□□□□□ -1.38
HLA-DMB-257ENST00000414017 KRTAP10-4P60372 401 aaPredicted RBP6.44□□□□□ -1.38
HLA-DMB-257ENST00000414017 S100A12P80511 92 aa6.44□□□□□ -1.38
HLA-DMB-257ENST00000414017 S100A7L2Q5SY68 101 aa6.44□□□□□ -1.38
HLA-DMB-257ENST00000414017 SLC25A34Q6PIV7 304 aa6.44□□□□□ -1.38
HLA-DMB-257ENST00000414017 MUSTN1Q8IVN3 82 aa6.44□□□□□ -1.38
HLA-DMB-257ENST00000414017 SPANXB1Q9NS25 103 aaPredicted RBP6.44□□□□□ -1.38
HLA-DMB-257ENST00000414017 IGLV1-50A0A075B6I6 118 aa6.43□□□□□ -1.38
HLA-DMB-257ENST00000414017 LOC107984156A0A0G2JMH3 177 aa6.43□□□□□ -1.38
HLA-DMB-257ENST00000414017 TRBV10-3A0A0K0K1G6 114 aa6.43□□□□□ -1.38
HLA-DMB-257ENST00000414017 ARL17AQ8IVW1 177 aa6.43□□□□□ -1.38
HLA-DMB-257ENST00000414017 OR13C6PQ8NH95 151 aa6.43□□□□□ -1.38
HLA-DMB-257ENST00000414017 COPS9Q8WXC6 57 aa6.43□□□□□ -1.38
HLA-DMB-257ENST00000414017 HIST1H4GQ99525 98 aa6.43□□□□□ -1.38
HLA-DMB-257ENST00000414017 NDUFC2O95298 119 aa6.42□□□□□ -1.38
HLA-DMB-257ENST00000414017 IGLV7-43P04211 117 aa6.42□□□□□ -1.38
HLA-DMB-257ENST00000414017 DDTP30046 118 aa6.42□□□□□ -1.38
HLA-DMB-257ENST00000414017 Q6ZVH6 145 aa6.42□□□□□ -1.38
HLA-DMB-257ENST00000414017 IFITM1P13164 125 aa6.41□□□□□ -1.38
HLA-DMB-257ENST00000414017 UBE2AP49459 152 aa6.41□□□□□ -1.38
HLA-DMB-257ENST00000414017 REG3GQ6UW15 175 aa6.41□□□□□ -1.38
HLA-DMB-257ENST00000414017 TRBV10-2A0A0K0K1G8 114 aa6.4□□□□□ -1.38
HLA-DMB-257ENST00000414017 DLEU1O43261 78 aa6.4□□□□□ -1.38
HLA-DMB-257ENST00000414017 BCE1O60756 84 aa6.4□□□□□ -1.38
HLA-DMB-257ENST00000414017 FAM19A1Q7Z5A9 133 aa6.4□□□□□ -1.38
HLA-DMB-257ENST00000414017 TMEM126AQ9H061 195 aa6.4□□□□□ -1.38
HLA-DMB-257ENST00000414017 LOC105371267A0A1B0GV96 52 aa6.39□□□□□ -1.39
HLA-DMB-257ENST00000414017 PRLHP81277 87 aa6.39□□□□□ -1.39
HLA-DMB-257ENST00000414017 ETDCA0A1B0GVM5 59 aa6.38□□□□□ -1.39
HLA-DMB-257ENST00000414017 A6NDN8 102 aa6.38□□□□□ -1.39
HLA-DMB-257ENST00000414017 PRYO14603 147 aa6.38□□□□□ -1.39
HLA-DMB-257ENST00000414017 C2orf91Q6ZV80 131 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms