RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 LINC00474Q9P2X8 69 aa5.17□□□□□ -1.58
UPF3AP1-201ENST00000413731 H3BRM9 83 aa5.16□□□□□ -1.58
UPF3AP1-201ENST00000413731 SPINK8P0C7L1 97 aa5.16□□□□□ -1.58
UPF3AP1-201ENST00000413731 PRR3P79522 188 aaKnown RBP5.16□□□□□ -1.58
UPF3AP1-201ENST00000413731 C2orf82Q6UX34 121 aa5.16□□□□□ -1.58
UPF3AP1-201ENST00000413731 UNQ6190/PRO20217Q6UXQ8 127 aa5.16□□□□□ -1.58
UPF3AP1-201ENST00000413731 Q6ZVQ6 151 aa5.16□□□□□ -1.58
UPF3AP1-201ENST00000413731 Q8IZM0 81 aa5.16□□□□□ -1.58
UPF3AP1-201ENST00000413731 LINC01600Q96MT4 127 aa5.16□□□□□ -1.58
UPF3AP1-201ENST00000413731 C6orf48Q9UBA6 75 aa5.16□□□□□ -1.58
UPF3AP1-201ENST00000413731 TRBV30A0A0K0K1B3 111 aa5.15□□□□□ -1.59
UPF3AP1-201ENST00000413731 SMIM1B2RUZ4 78 aa5.15□□□□□ -1.59
UPF3AP1-201ENST00000413731 IGLC3P0DOY3 106 aa5.15□□□□□ -1.59
UPF3AP1-201ENST00000413731 SRSF9Q13242 221 aaKnown RBP eCLIP5.15□□□□□ -1.59
UPF3AP1-201ENST00000413731 KIAA0087Q14695 138 aa5.15□□□□□ -1.59
UPF3AP1-201ENST00000413731 C6orf226Q5I0X4 101 aa5.15□□□□□ -1.59
UPF3AP1-201ENST00000413731 LCE1DQ5T752 114 aa5.15□□□□□ -1.59
UPF3AP1-201ENST00000413731 C7orf33Q8WU49 177 aa5.15□□□□□ -1.59
UPF3AP1-201ENST00000413731 IFI27L1Q96BM0 104 aa5.15□□□□□ -1.59
UPF3AP1-201ENST00000413731 H0Y8G0 127 aa5.14□□□□□ -1.59
UPF3AP1-201ENST00000413731 CXCL5P42830 114 aa5.14□□□□□ -1.59
UPF3AP1-201ENST00000413731 COX7B2Q8TF08 81 aa5.14□□□□□ -1.59
UPF3AP1-201ENST00000413731 PLAC8Q9NZF1 115 aa5.14□□□□□ -1.59
UPF3AP1-201ENST00000413731 CHTOPQ9Y3Y2 248 aaKnown RBP5.14□□□□□ -1.59
UPF3AP1-201ENST00000413731 C11orf86A6NJI1 115 aa5.13□□□□□ -1.59
UPF3AP1-201ENST00000413731 F8VRH5 84 aa5.13□□□□□ -1.59
UPF3AP1-201ENST00000413731 LEPROTL1O95214 131 aa5.13□□□□□ -1.59
UPF3AP1-201ENST00000413731 FABP4P15090 132 aa5.13□□□□□ -1.59
UPF3AP1-201ENST00000413731 ZNF22P17026 224 aaPredicted RBP5.13□□□□□ -1.59
UPF3AP1-201ENST00000413731 TMEM170BQ5T4T1 132 aa5.13□□□□□ -1.59
UPF3AP1-201ENST00000413731 LCE4AQ5TA78 99 aa5.13□□□□□ -1.59
UPF3AP1-201ENST00000413731 TRAV12-1A0A0B4J245 112 aa5.12□□□□□ -1.59
UPF3AP1-201ENST00000413731 NDUFC2-KCTD14E9PQ53 114 aa5.12□□□□□ -1.59
UPF3AP1-201ENST00000413731 C9orf116Q5BN46 136 aaPredicted RBP5.12□□□□□ -1.59
UPF3AP1-201ENST00000413731 Q6ZRP5 223 aa5.12□□□□□ -1.59
UPF3AP1-201ENST00000413731 FAM19A5Q7Z5A7 132 aaPredicted RBP5.12□□□□□ -1.59
UPF3AP1-201ENST00000413731 HSPB8Q9UJY1 196 aa5.12□□□□□ -1.59
UPF3AP1-201ENST00000413731 TLX1NBP0CAT3 122 aa5.11□□□□□ -1.59
UPF3AP1-201ENST00000413731 KRTAP10-8P60410 259 aa5.11□□□□□ -1.59
UPF3AP1-201ENST00000413731 COA6Q5JTJ3 125 aaKnown RBP5.11□□□□□ -1.59
UPF3AP1-201ENST00000413731 LPAP08519 4548 aa5.11□□□□□ -1.59
UPF3AP1-201ENST00000413731 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
UPF3AP1-201ENST00000413731 A0A1W2PNN7 141 aa5.09□□□□□ -1.59
UPF3AP1-201ENST00000413731 FAM168BA1KXE4 195 aa5.09□□□□□ -1.59
UPF3AP1-201ENST00000413731 PCP4L1A6NKN8 68 aa5.09□□□□□ -1.59
UPF3AP1-201ENST00000413731 SPINK6Q6UWN8 80 aa5.09□□□□□ -1.59
UPF3AP1-201ENST00000413731 PMCHL2Q9BQD1 86 aa5.09□□□□□ -1.59
UPF3AP1-201ENST00000413731 M0QXV9 152 aa5.08□□□□□ -1.6
UPF3AP1-201ENST00000413731 PLNP26678 52 aa5.08□□□□□ -1.6
UPF3AP1-201ENST00000413731 SFTA2Q6UW10 78 aa5.08□□□□□ -1.6
UPF3AP1-201ENST00000413731 REG3GQ6UW15 175 aa5.08□□□□□ -1.6
UPF3AP1-201ENST00000413731 MAP1LC3CQ9BXW4 147 aa5.08□□□□□ -1.6
UPF3AP1-201ENST00000413731 XAGE1AQ9HD64 81 aa5.08□□□□□ -1.6
UPF3AP1-201ENST00000413731 TMEM223A0PJW6 202 aa5.07□□□□□ -1.6
UPF3AP1-201ENST00000413731 S100A6P06703 90 aa5.07□□□□□ -1.6
UPF3AP1-201ENST00000413731 PFN2P35080 140 aa5.07□□□□□ -1.6
UPF3AP1-201ENST00000413731 UBE2BP63146 152 aa5.07□□□□□ -1.6
UPF3AP1-201ENST00000413731 C9orf129Q5T035 196 aaKnown RBP5.07□□□□□ -1.6
UPF3AP1-201ENST00000413731 PHF5AQ7RTV0 110 aaKnown RBP5.07□□□□□ -1.6
UPF3AP1-201ENST00000413731 ZNF625Q96I27 306 aaPredicted RBP5.07□□□□□ -1.6
UPF3AP1-201ENST00000413731 SYS1-DBNDD2H3BUS1 97 aa5.06□□□□□ -1.6
UPF3AP1-201ENST00000413731 DPM2O94777 84 aa5.06□□□□□ -1.6
UPF3AP1-201ENST00000413731 KRTDAPP60985 99 aa5.06□□□□□ -1.6
UPF3AP1-201ENST00000413731 HERVK_113P61574 105 aa5.06□□□□□ -1.6
UPF3AP1-201ENST00000413731 HIST3H2BBQ8N257 126 aa5.06□□□□□ -1.6
UPF3AP1-201ENST00000413731 ERG28Q9UKR5 140 aa5.06□□□□□ -1.6
UPF3AP1-201ENST00000413731 IGKCP01834 107 aa5.05□□□□□ -1.6
UPF3AP1-201ENST00000413731 C3orf79P0CE67 100 aa5.05□□□□□ -1.6
UPF3AP1-201ENST00000413731 S100A2P29034 98 aa5.05□□□□□ -1.6
UPF3AP1-201ENST00000413731 FAM218AQ96MZ4 157 aa5.05□□□□□ -1.6
UPF3AP1-201ENST00000413731 IGKV2-30P06310 120 aa5.04□□□□□ -1.6
UPF3AP1-201ENST00000413731 MEIG1Q5JSS6 88 aa5.04□□□□□ -1.6
UPF3AP1-201ENST00000413731 C1orf137Q5JT78 98 aa5.04□□□□□ -1.6
UPF3AP1-201ENST00000413731 HIST1H2BLQ99880 126 aa5.04□□□□□ -1.6
UPF3AP1-201ENST00000413731 PSORS1C2Q9UIG4 136 aa5.04□□□□□ -1.6
UPF3AP1-201ENST00000413731 LINC00158P58513 81 aa5.03□□□□□ -1.6
UPF3AP1-201ENST00000413731 COX17Q14061 63 aa5.03□□□□□ -1.6
UPF3AP1-201ENST00000413731 LINC01545Q5VT33 79 aa5.03□□□□□ -1.6
UPF3AP1-201ENST00000413731 NKAPP1Q8N9T2 125 aa5.03□□□□□ -1.6
UPF3AP1-201ENST00000413731 PLEKHB2Q96CS7 222 aa5.03□□□□□ -1.6
UPF3AP1-201ENST00000413731 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
UPF3AP1-201ENST00000413731 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
UPF3AP1-201ENST00000413731 NDUFA12Q9UI09 145 aa5.03□□□□□ -1.6
UPF3AP1-201ENST00000413731 MYMXA0A1B0GTQ4 84 aa5.02□□□□□ -1.61
UPF3AP1-201ENST00000413731 C20orf202A1L168 122 aa5.02□□□□□ -1.61
UPF3AP1-201ENST00000413731 LEPROTO15243 131 aa5.02□□□□□ -1.61
UPF3AP1-201ENST00000413731 LGALS3P17931 250 aaKnown RBP5.02□□□□□ -1.61
UPF3AP1-201ENST00000413731 TSPEAR-AS2P59090 65 aa5.02□□□□□ -1.61
UPF3AP1-201ENST00000413731 MRPL55Q7Z7F7 128 aaKnown RBP5.02□□□□□ -1.61
UPF3AP1-201ENST00000413731 KRTAP7-1Q8IUC3 87 aa5.02□□□□□ -1.61
UPF3AP1-201ENST00000413731 SND1-IT1Q9HBX3 110 aa5.02□□□□□ -1.61
UPF3AP1-201ENST00000413731 C22orf24Q9Y442 160 aa5.02□□□□□ -1.61
UPF3AP1-201ENST00000413731 J3QQQ9 107 aa5.01□□□□□ -1.61
UPF3AP1-201ENST00000413731 SMIM13P0DJ93 91 aa5.01□□□□□ -1.61
UPF3AP1-201ENST00000413731 TP73-AS1Q9UF72 201 aa5.01□□□□□ -1.61
UPF3AP1-201ENST00000413731 FAT4Q6V0I7 4981 aa5□□□□□ -1.61
UPF3AP1-201ENST00000413731 MUC2Q02817 5179 aa5□□□□□ -1.61
UPF3AP1-201ENST00000413731 NMUP48645 174 aa5□□□□□ -1.61
UPF3AP1-201ENST00000413731 KRTAP11-1Q8IUC1 163 aa5□□□□□ -1.61
UPF3AP1-201ENST00000413731 ATOH7Q8N100 152 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms