RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 Q8NDZ9 215 aa8.08□□□□□ -1.12
HDAC8-210ENST00000412342 DMBT1Q9UGM3 2413 aaPredicted RBP8.08□□□□□ -1.12
HDAC8-210ENST00000412342 E9PLD3 99 aa8.07□□□□□ -1.12
HDAC8-210ENST00000412342 HERV-K104P63124 156 aa8.07□□□□□ -1.12
HDAC8-210ENST00000412342 C1orf137Q5JT78 98 aa8.07□□□□□ -1.12
HDAC8-210ENST00000412342 MRPL55Q7Z7F7 128 aaKnown RBP8.07□□□□□ -1.12
HDAC8-210ENST00000412342 HIST3H2BBQ8N257 126 aa8.07□□□□□ -1.12
HDAC8-210ENST00000412342 TNXBP22105 4242 aa8.06□□□□□ -1.12
HDAC8-210ENST00000412342 MYMXA0A1B0GTQ4 84 aa8.06□□□□□ -1.12
HDAC8-210ENST00000412342 OXTP01178 125 aa8.06□□□□□ -1.12
HDAC8-210ENST00000412342 SMIM13P0DJ93 91 aa8.06□□□□□ -1.12
HDAC8-210ENST00000412342 VPREB1P12018 145 aa8.06□□□□□ -1.12
HDAC8-210ENST00000412342 KRTDAPP60985 99 aa8.06□□□□□ -1.12
HDAC8-210ENST00000412342 A0A0U1RRA0 63 aa8.05□□□□□ -1.12
HDAC8-210ENST00000412342 LINC00158P58513 81 aa8.05□□□□□ -1.12
HDAC8-210ENST00000412342 UBE2BP63146 152 aa8.05□□□□□ -1.12
HDAC8-210ENST00000412342 LBHQ53QV2 105 aaPredicted RBP8.05□□□□□ -1.12
HDAC8-210ENST00000412342 SPINK6Q6UWN8 80 aa8.05□□□□□ -1.12
HDAC8-210ENST00000412342 LINC00167Q96N53 147 aa8.05□□□□□ -1.12
HDAC8-210ENST00000412342 IGLV7-43P04211 117 aa8.04□□□□□ -1.12
HDAC8-210ENST00000412342 NMUP48645 174 aa8.04□□□□□ -1.12
HDAC8-210ENST00000412342 MEIG1Q5JSS6 88 aa8.04□□□□□ -1.12
HDAC8-210ENST00000412342 HIST1H2BLQ99880 126 aa8.04□□□□□ -1.12
HDAC8-210ENST00000412342 LGALS3P17931 250 aaKnown RBP8.03□□□□□ -1.12
HDAC8-210ENST00000412342 MIR7-3HGQ8N6C7 128 aa8.03□□□□□ -1.12
HDAC8-210ENST00000412342 IGKV2D-26A0A0A0MRZ7 120 aa8.02□□□□□ -1.13
HDAC8-210ENST00000412342 LINC00587B1AMM8 73 aa8.02□□□□□ -1.13
HDAC8-210ENST00000412342 MT1HL1P0DM35 61 aa8.02□□□□□ -1.13
HDAC8-210ENST00000412342 GAGE10A6NGK3 116 aa8.01□□□□□ -1.13
HDAC8-210ENST00000412342 NKAPP1Q8N9T2 125 aa8.01□□□□□ -1.13
HDAC8-210ENST00000412342 LOC107984156A0A0G2JMH3 177 aa8□□□□□ -1.13
HDAC8-210ENST00000412342 A0A0J9YXY3 114 aa8□□□□□ -1.13
HDAC8-210ENST00000412342 RPL37AP8A6NKH3 93 aa8□□□□□ -1.13
HDAC8-210ENST00000412342 RPL24P83731 157 aaKnown RBP8□□□□□ -1.13
HDAC8-210ENST00000412342 ARL17AQ8IVW1 177 aa8□□□□□ -1.13
HDAC8-210ENST00000412342 IGLV1-50A0A075B6I6 118 aa7.99□□□□□ -1.13
HDAC8-210ENST00000412342 C20orf202A1L168 122 aa7.99□□□□□ -1.13
HDAC8-210ENST00000412342 C5orf52A6NGY3 159 aa7.99□□□□□ -1.13
HDAC8-210ENST00000412342 J3QL48 77 aa7.99□□□□□ -1.13
HDAC8-210ENST00000412342 S100A6P06703 90 aa7.99□□□□□ -1.13
HDAC8-210ENST00000412342 S100A2P29034 98 aa7.99□□□□□ -1.13
HDAC8-210ENST00000412342 SNRPEP62304 92 aaKnown RBP7.99□□□□□ -1.13
HDAC8-210ENST00000412342 ANKRD39Q53RE8 183 aa7.99□□□□□ -1.13
HDAC8-210ENST00000412342 DAND5Q8N907 189 aa7.99□□□□□ -1.13
HDAC8-210ENST00000412342 ATOH7Q8N100 152 aa7.98□□□□□ -1.13
HDAC8-210ENST00000412342 LINC01600Q96MT4 127 aa7.98□□□□□ -1.13
HDAC8-210ENST00000412342 LITAFQ99732 161 aa7.98□□□□□ -1.13
HDAC8-210ENST00000412342 TTTY13Q9BZ97 58 aa7.98□□□□□ -1.13
HDAC8-210ENST00000412342 IGKV2-28A0A075B6P5 120 aa7.97□□□□□ -1.13
HDAC8-210ENST00000412342 H0Y9J4 135 aa7.97□□□□□ -1.13
HDAC8-210ENST00000412342 BCE1O60756 84 aa7.97□□□□□ -1.13
HDAC8-210ENST00000412342 IGKV2D-28P01615 120 aa7.97□□□□□ -1.13
HDAC8-210ENST00000412342 ADAMTSL4-AS1Q5T5F5 129 aa7.97□□□□□ -1.13
HDAC8-210ENST00000412342 BOD1L2Q8IYS8 172 aa7.97□□□□□ -1.13
HDAC8-210ENST00000412342 ZNF861PO60384 105 aa7.96□□□□□ -1.14
HDAC8-210ENST00000412342 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.14
HDAC8-210ENST00000412342 REG3GQ6UW15 175 aa7.96□□□□□ -1.14
HDAC8-210ENST00000412342 SOSTDC1Q6X4U4 206 aa7.96□□□□□ -1.14
HDAC8-210ENST00000412342 KRTAP13-1Q8IUC0 172 aa7.96□□□□□ -1.14
HDAC8-210ENST00000412342 DIRC1Q969H9 104 aa7.96□□□□□ -1.14
HDAC8-210ENST00000412342 M0R378 163 aa7.95□□□□□ -1.14
HDAC8-210ENST00000412342 AKR1D1P51857 326 aa7.95□□□□□ -1.14
HDAC8-210ENST00000412342 ZNF815PA8K554 130 aa7.94□□□□□ -1.14
HDAC8-210ENST00000412342 TMEM238C9JI98 176 aa7.94□□□□□ -1.14
HDAC8-210ENST00000412342 TIMM17BO60830 172 aa7.94□□□□□ -1.14
HDAC8-210ENST00000412342 KRTAP1-4P0C5Y4 121 aa7.94□□□□□ -1.14
HDAC8-210ENST00000412342 TMEM126AQ9H061 195 aa7.94□□□□□ -1.14
HDAC8-210ENST00000412342 NCR3O14931 201 aa7.93□□□□□ -1.14
HDAC8-210ENST00000412342 KRTAP10-8P60410 259 aa7.93□□□□□ -1.14
HDAC8-210ENST00000412342 HMCN2Q8NDA2 5059 aa7.93□□□□□ -1.14
HDAC8-210ENST00000412342 TRBV10-2A0A0K0K1G8 114 aa7.91□□□□□ -1.14
HDAC8-210ENST00000412342 NDUFC2O95298 119 aa7.91□□□□□ -1.14
HDAC8-210ENST00000412342 RPL28P46779 137 aaKnown RBP7.91□□□□□ -1.14
HDAC8-210ENST00000412342 PCP2Q8IVA1 136 aa7.91□□□□□ -1.14
HDAC8-210ENST00000412342 TRBV10-3A0A0K0K1G6 114 aa7.9□□□□□ -1.14
HDAC8-210ENST00000412342 SPRR1AP35321 89 aa7.9□□□□□ -1.14
HDAC8-210ENST00000412342 NPC2P61916 151 aa7.9□□□□□ -1.14
HDAC8-210ENST00000412342 LINC00308Q8TCZ7 52 aa7.9□□□□□ -1.14
HDAC8-210ENST00000412342 MIEN1Q9BRT3 115 aa7.9□□□□□ -1.14
HDAC8-210ENST00000412342 KRTAP4-16G5E9R7 235 aaPredicted RBP7.89□□□□□ -1.15
HDAC8-210ENST00000412342 PRYO14603 147 aa7.89□□□□□ -1.15
HDAC8-210ENST00000412342 PRLHP81277 87 aa7.89□□□□□ -1.15
HDAC8-210ENST00000412342 KCNQ1DNQ9H478 68 aa7.89□□□□□ -1.15
HDAC8-210ENST00000412342 SPANXB1Q9NS25 103 aaPredicted RBP7.89□□□□□ -1.15
HDAC8-210ENST00000412342 IGLV6-57P01721 117 aa7.87□□□□□ -1.15
HDAC8-210ENST00000412342 UBE2AP49459 152 aa7.87□□□□□ -1.15
HDAC8-210ENST00000412342 FAM19A1Q7Z5A9 133 aa7.87□□□□□ -1.15
HDAC8-210ENST00000412342 SPANXDQ9BXN6 97 aa7.87□□□□□ -1.15
HDAC8-210ENST00000412342 SPANXCQ9NY87 97 aa7.87□□□□□ -1.15
HDAC8-210ENST00000412342 DDTP30046 118 aa7.86□□□□□ -1.15
HDAC8-210ENST00000412342 SCGB1D4Q6XE38 83 aa7.86□□□□□ -1.15
HDAC8-210ENST00000412342 LINC00337Q8N6G1 96 aa7.86□□□□□ -1.15
HDAC8-210ENST00000412342 PRR26Q8N8Z3 221 aa7.86□□□□□ -1.15
HDAC8-210ENST00000412342 SCGB1D1O95968 90 aa7.85□□□□□ -1.15
HDAC8-210ENST00000412342 PPDPFQ9H3Y8 114 aa7.85□□□□□ -1.15
HDAC8-210ENST00000412342 HSBP1L1C9JCN9 74 aa7.83□□□□□ -1.16
HDAC8-210ENST00000412342 Q6ZVH6 145 aa7.82□□□□□ -1.16
HDAC8-210ENST00000412342 A0A087X002 238 aa7.81□□□□□ -1.16
HDAC8-210ENST00000412342 B5MCH6 92 aa7.81□□□□□ -1.16
HDAC8-210ENST00000412342 IFITM1P13164 125 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms