RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ANKRD17O75179 2603 aaKnown RBP3.36□□□□□ -1.87
HERC4-205ENST00000412272 ZFP36P26651 326 aaKnown RBP3.36□□□□□ -1.87
HERC4-205ENST00000412272 DNAJC9-AS1A6NH13 148 aa3.36□□□□□ -1.87
HERC4-205ENST00000412272 Q6ZQY7 126 aa3.36□□□□□ -1.87
HERC4-205ENST00000412272 TRGV4A0A0C4DH28 118 aa3.35□□□□□ -1.87
HERC4-205ENST00000412272 KRTAP16-1A8MUX0 517 aa3.35□□□□□ -1.87
HERC4-205ENST00000412272 IGKV3-20P01619 116 aa3.35□□□□□ -1.87
HERC4-205ENST00000412272 ABCA4P78363 2273 aa3.35□□□□□ -1.87
HERC4-205ENST00000412272 H0Y9P7 68 aa3.35□□□□□ -1.87
HERC4-205ENST00000412272 IGLV1-50A0A075B6I6 118 aa3.34□□□□□ -1.87
HERC4-205ENST00000412272 DEFB112Q30KQ8 113 aa3.34□□□□□ -1.87
HERC4-205ENST00000412272 IGLV5-48A0A075B6I7 105 aa3.34□□□□□ -1.88
HERC4-205ENST00000412272 REG3GQ6UW15 175 aa3.34□□□□□ -1.88
HERC4-205ENST00000412272 A0A1B0GUV1 79 aa3.33□□□□□ -1.88
HERC4-205ENST00000412272 CMC4P56277 68 aaPredicted RBP3.33□□□□□ -1.88
HERC4-205ENST00000412272 IGLV7-46A0A075B6I9 117 aa3.33□□□□□ -1.88
HERC4-205ENST00000412272 GVQW2A0A096LPI5 108 aaPredicted RBP3.33□□□□□ -1.88
HERC4-205ENST00000412272 DSCR10P59022 87 aa3.33□□□□□ -1.88
HERC4-205ENST00000412272 KPRPQ5T749 579 aaPredicted RBP3.33□□□□□ -1.88
HERC4-205ENST00000412272 SPATA8Q6RVD6 105 aa3.33□□□□□ -1.88
HERC4-205ENST00000412272 PRR34Q9NV39 138 aa3.32□□□□□ -1.88
HERC4-205ENST00000412272 A0A0J9YWU9 116 aa3.32□□□□□ -1.88
HERC4-205ENST00000412272 LYNX1G3V0Z9 82 aa3.32□□□□□ -1.88
HERC4-205ENST00000412272 LYNX1P0DP58 116 aa3.32□□□□□ -1.88
HERC4-205ENST00000412272 A6NDX4 124 aa3.32□□□□□ -1.88
HERC4-205ENST00000412272 SPRR4Q96PI1 79 aa3.32□□□□□ -1.88
HERC4-205ENST00000412272 TOMM7Q9P0U1 55 aa3.32□□□□□ -1.88
HERC4-205ENST00000412272 SVEP1Q4LDE5 3571 aa3.32□□□□□ -1.88
HERC4-205ENST00000412272 INSP01308 110 aa3.31□□□□□ -1.88
HERC4-205ENST00000412272 PRO3102Q9H379 93 aa3.31□□□□□ -1.88
HERC4-205ENST00000412272 K7EQZ3 153 aa3.31□□□□□ -1.88
HERC4-205ENST00000412272 KRTAP25-1Q3LHN0 102 aa3.31□□□□□ -1.88
HERC4-205ENST00000412272 ZNF861PO60384 105 aa3.31□□□□□ -1.88
HERC4-205ENST00000412272 LINC00483Q53H64 154 aa3.31□□□□□ -1.88
HERC4-205ENST00000412272 PATE3B3GLJ2 98 aa3.3□□□□□ -1.88
HERC4-205ENST00000412272 XAGE1AQ9HD64 81 aa3.3□□□□□ -1.88
HERC4-205ENST00000412272 CDK2AP2O75956 126 aa3.3□□□□□ -1.88
HERC4-205ENST00000412272 PLA2G2DQ9UNK4 145 aa3.3□□□□□ -1.88
HERC4-205ENST00000412272 IGKV2D-24A0A075B6R9 120 aa3.3□□□□□ -1.88
HERC4-205ENST00000412272 TNP2Q05952 138 aa3.3□□□□□ -1.88
HERC4-205ENST00000412272 LINC00528Q8N1L1 170 aa3.3□□□□□ -1.88
HERC4-205ENST00000412272 AHCTF1Q8WYP5 2266 aa3.29□□□□□ -1.88
HERC4-205ENST00000412272 ICE1Q9Y2F5 2266 aa3.29□□□□□ -1.88
HERC4-205ENST00000412272 BOD1L1Q8NFC6 3051 aa3.29□□□□□ -1.88
HERC4-205ENST00000412272 IGKV3-7A0A075B6H7 116 aa3.29□□□□□ -1.88
HERC4-205ENST00000412272 ALMS1Q8TCU4 4167 aa3.28□□□□□ -1.88
HERC4-205ENST00000412272 SEC61BP60468 96 aaKnown RBP3.28□□□□□ -1.88
HERC4-205ENST00000412272 WNK2Q9Y3S1 2297 aa3.28□□□□□ -1.88
HERC4-205ENST00000412272 IGLV5-37A0A075B6J1 123 aa3.28□□□□□ -1.88
HERC4-205ENST00000412272 J3QL48 77 aa3.28□□□□□ -1.88
HERC4-205ENST00000412272 CUBNO60494 3623 aa3.28□□□□□ -1.88
HERC4-205ENST00000412272 TECTAO75443 2155 aa3.28□□□□□ -1.88
HERC4-205ENST00000412272 CELSR3Q9NYQ7 3312 aa3.28□□□□□ -1.89
HERC4-205ENST00000412272 KRTAP29-1A8MX34 341 aaPredicted RBP3.27□□□□□ -1.89
HERC4-205ENST00000412272 HRES1P13985 223 aa3.27□□□□□ -1.89
HERC4-205ENST00000412272 DMXL1Q9Y485 3027 aa3.27□□□□□ -1.89
HERC4-205ENST00000412272 C20orf166-AS1Q96NR2 134 aa3.27□□□□□ -1.89
HERC4-205ENST00000412272 IGLV9-49A0A0B4J1Y8 123 aa3.27□□□□□ -1.89
HERC4-205ENST00000412272 DEFB116Q30KQ4 102 aa3.27□□□□□ -1.89
HERC4-205ENST00000412272 SPTBN1Q01082 2364 aaKnown RBP3.26□□□□□ -1.89
HERC4-205ENST00000412272 A8MWP4 228 aa3.26□□□□□ -1.89
HERC4-205ENST00000412272 OTOGQ6ZRI0 2925 aa3.26□□□□□ -1.89
HERC4-205ENST00000412272 A8MUU9 505 aa3.26□□□□□ -1.89
HERC4-205ENST00000412272 DEFB131AP59861 70 aa3.26□□□□□ -1.89
HERC4-205ENST00000412272 PLA2G2CQ5R387 149 aa3.26□□□□□ -1.89
HERC4-205ENST00000412272 Q8NBF4 154 aa3.26□□□□□ -1.89
HERC4-205ENST00000412272 C16orf74Q96GX8 76 aa3.26□□□□□ -1.89
HERC4-205ENST00000412272 IGLV5-52A0A0A0MRZ9 124 aa3.25□□□□□ -1.89
HERC4-205ENST00000412272 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
HERC4-205ENST00000412272 AKAP9Q99996 3911 aa3.25□□□□□ -1.89
HERC4-205ENST00000412272 TRGV1A0A0A0MS02 117 aa3.25□□□□□ -1.89
HERC4-205ENST00000412272 CHTF8P0CG12 524 aa3.25□□□□□ -1.89
HERC4-205ENST00000412272 CASC10Q5T4H9 136 aa3.25□□□□□ -1.89
HERC4-205ENST00000412272 CSNK1G2-AS1Q8NCQ2 148 aa3.25□□□□□ -1.89
HERC4-205ENST00000412272 DMXL2Q8TDJ6 3036 aa3.24□□□□□ -1.89
HERC4-205ENST00000412272 CYSRT1A8MQ03 144 aa3.24□□□□□ -1.89
HERC4-205ENST00000412272 DEFB113Q30KQ7 82 aa3.24□□□□□ -1.89
HERC4-205ENST00000412272 C8orf17Q9NRJ1 99 aa3.24□□□□□ -1.89
HERC4-205ENST00000412272 Q8N377 158 aa3.23□□□□□ -1.89
HERC4-205ENST00000412272 CUL9Q8IWT3 2517 aa3.23□□□□□ -1.89
HERC4-205ENST00000412272 COL12A1Q99715 3063 aa3.23□□□□□ -1.89
HERC4-205ENST00000412272 HTN1P15515 57 aa3.23□□□□□ -1.89
HERC4-205ENST00000412272 LINC00472Q9H8W2 130 aa3.23□□□□□ -1.89
HERC4-205ENST00000412272 WFDC13Q8IUB5 93 aa3.23□□□□□ -1.89
HERC4-205ENST00000412272 CHD6Q8TD26 2715 aa3.22□□□□□ -1.89
HERC4-205ENST00000412272 A0A087WSZ3 146 aa3.22□□□□□ -1.89
HERC4-205ENST00000412272 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
HERC4-205ENST00000412272 FAM186AA6NE01 2351 aa3.22□□□□□ -1.89
HERC4-205ENST00000412272 DEFB109BQ30KR1 87 aa3.22□□□□□ -1.89
HERC4-205ENST00000412272 IGKV3OR2-268A0A0C4DH90 116 aa3.22□□□□□ -1.89
HERC4-205ENST00000412272 DNAH10OSP0CZ25 163 aa3.21□□□□□ -1.89
HERC4-205ENST00000412272 KRTAP26-1Q6PEX3 210 aa3.21□□□□□ -1.89
HERC4-205ENST00000412272 DHRS4-AS1Q9P1J3 65 aa3.21□□□□□ -1.9
HERC4-205ENST00000412272 DSPP15924 2871 aaKnown RBP3.21□□□□□ -1.9
HERC4-205ENST00000412272 IGLV8-61A0A075B6I0 122 aa3.21□□□□□ -1.9
HERC4-205ENST00000412272 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.21□□□□□ -1.9
HERC4-205ENST00000412272 WFDC10BQ8IUB3 73 aa3.2□□□□□ -1.9
HERC4-205ENST00000412272 KRTAP4-16G5E9R7 235 aaPredicted RBP3.2□□□□□ -1.9
HERC4-205ENST00000412272 H3BUX3 64 aa3.2□□□□□ -1.9
HERC4-205ENST00000412272 GIG44P09565 113 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms