RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 LINC01620Q4KN68 170 aa5.59□□□□□ -1.51
LINC02539-201ENST00000411615 SPATA45Q537H7 98 aa5.59□□□□□ -1.51
LINC02539-201ENST00000411615 MEIG1Q5JSS6 88 aa5.59□□□□□ -1.51
LINC02539-201ENST00000411615 PCP2Q8IVA1 136 aa5.59□□□□□ -1.51
LINC02539-201ENST00000411615 BOD1L2Q8IYS8 172 aa5.59□□□□□ -1.51
LINC02539-201ENST00000411615 PAM16Q9Y3D7 125 aa5.59□□□□□ -1.51
LINC02539-201ENST00000411615 LOC107984156A0A0G2JMH3 177 aa5.58□□□□□ -1.52
LINC02539-201ENST00000411615 SMIM13P0DJ93 91 aa5.58□□□□□ -1.52
LINC02539-201ENST00000411615 LINC00158P58513 81 aa5.58□□□□□ -1.52
LINC02539-201ENST00000411615 RPL18AQ02543 176 aaKnown RBP5.58□□□□□ -1.52
LINC02539-201ENST00000411615 GAGE2BQ13066 116 aa5.58□□□□□ -1.52
LINC02539-201ENST00000411615 Q6ZVH6 145 aa5.58□□□□□ -1.52
LINC02539-201ENST00000411615 ARL17AQ8IVW1 177 aa5.58□□□□□ -1.52
LINC02539-201ENST00000411615 SPACA4Q8TDM5 124 aa5.58□□□□□ -1.52
LINC02539-201ENST00000411615 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
LINC02539-201ENST00000411615 TTTY13Q9BZ97 58 aa5.58□□□□□ -1.52
LINC02539-201ENST00000411615 PPDPFQ9H3Y8 114 aa5.58□□□□□ -1.52
LINC02539-201ENST00000411615 GAGE2EQ4V326 116 aa5.57□□□□□ -1.52
LINC02539-201ENST00000411615 SCGB1D4Q6XE38 83 aa5.57□□□□□ -1.52
LINC02539-201ENST00000411615 LITAFQ99732 161 aa5.57□□□□□ -1.52
LINC02539-201ENST00000411615 SND1-IT1Q9HBX3 110 aa5.57□□□□□ -1.52
LINC02539-201ENST00000411615 GAGE2DQ9UEU5 116 aa5.57□□□□□ -1.52
LINC02539-201ENST00000411615 TMEM238C9JI98 176 aa5.56□□□□□ -1.52
LINC02539-201ENST00000411615 CDK2AP2O75956 126 aa5.56□□□□□ -1.52
LINC02539-201ENST00000411615 C9orf129Q5T035 196 aaKnown RBP5.56□□□□□ -1.52
LINC02539-201ENST00000411615 SLC25A34Q6PIV7 304 aa5.56□□□□□ -1.52
LINC02539-201ENST00000411615 MIR7-3HGQ8N6C7 128 aa5.56□□□□□ -1.52
LINC02539-201ENST00000411615 SPANXDQ9BXN6 97 aa5.56□□□□□ -1.52
LINC02539-201ENST00000411615 SPANXCQ9NY87 97 aa5.56□□□□□ -1.52
LINC02539-201ENST00000411615 PLAC8Q9NZF1 115 aa5.56□□□□□ -1.52
LINC02539-201ENST00000411615 FAM30AQ9NZY2 134 aa5.56□□□□□ -1.52
LINC02539-201ENST00000411615 IGKV2-24A0A0C4DH68 120 aa5.55□□□□□ -1.52
LINC02539-201ENST00000411615 PANO1I0J062 215 aa5.55□□□□□ -1.52
LINC02539-201ENST00000411615 CHTF8P0CG12 524 aa5.55□□□□□ -1.52
LINC02539-201ENST00000411615 IFITM1P13164 125 aa5.55□□□□□ -1.52
LINC02539-201ENST00000411615 ADAMTSL4-AS1Q5T5F5 129 aa5.55□□□□□ -1.52
LINC02539-201ENST00000411615 COPS9Q8WXC6 57 aa5.55□□□□□ -1.52
LINC02539-201ENST00000411615 C14orf144Q96I85 54 aa5.55□□□□□ -1.52
LINC02539-201ENST00000411615 SPANXB1Q9NS25 103 aaPredicted RBP5.55□□□□□ -1.52
LINC02539-201ENST00000411615 PKHD1P08F94 4074 aa5.54□□□□□ -1.52
LINC02539-201ENST00000411615 IGLV5-37A0A075B6J1 123 aa5.54□□□□□ -1.52
LINC02539-201ENST00000411615 A0A087WYN8 130 aa5.54□□□□□ -1.52
LINC02539-201ENST00000411615 A0A0U1RRA0 63 aa5.54□□□□□ -1.52
LINC02539-201ENST00000411615 XGP55808 180 aa5.54□□□□□ -1.52
LINC02539-201ENST00000411615 RPL24P83731 157 aaKnown RBP5.54□□□□□ -1.52
LINC02539-201ENST00000411615 DPH3Q96FX2 82 aa5.54□□□□□ -1.52
LINC02539-201ENST00000411615 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
LINC02539-201ENST00000411615 XAGE1AQ9HD64 81 aa5.54□□□□□ -1.52
LINC02539-201ENST00000411615 HIGD1BQ9P298 99 aa5.54□□□□□ -1.52
LINC02539-201ENST00000411615 DNAH5Q8TE73 4624 aa5.54□□□□□ -1.52
LINC02539-201ENST00000411615 A0A1W2PNN7 141 aa5.53□□□□□ -1.52
LINC02539-201ENST00000411615 NDUFC2O95298 119 aa5.53□□□□□ -1.52
LINC02539-201ENST00000411615 CIRBP-AS1Q8TBR5 109 aa5.53□□□□□ -1.52
LINC02539-201ENST00000411615 MIEN1Q9BRT3 115 aa5.53□□□□□ -1.52
LINC02539-201ENST00000411615 UQCR10Q9UDW1 63 aa5.53□□□□□ -1.52
LINC02539-201ENST00000411615 TP73-AS1Q9UF72 201 aa5.53□□□□□ -1.52
LINC02539-201ENST00000411615 SCXQ7RTU7 201 aa5.52□□□□□ -1.53
LINC02539-201ENST00000411615 KRTAP7-1Q8IUC3 87 aa5.52□□□□□ -1.53
LINC02539-201ENST00000411615 LINC00308Q8TCZ7 52 aa5.52□□□□□ -1.53
LINC02539-201ENST00000411615 DYNC1H1Q14204 4646 aaKnown RBP5.51□□□□□ -1.53
LINC02539-201ENST00000411615 TRBV10-2A0A0K0K1G8 114 aa5.51□□□□□ -1.53
LINC02539-201ENST00000411615 VPREB1P12018 145 aa5.51□□□□□ -1.53
LINC02539-201ENST00000411615 SRSF9Q13242 221 aaKnown RBP eCLIP5.51□□□□□ -1.53
LINC02539-201ENST00000411615 TAL2Q16559 108 aa5.51□□□□□ -1.53
LINC02539-201ENST00000411615 LBHQ53QV2 105 aaPredicted RBP5.51□□□□□ -1.53
LINC02539-201ENST00000411615 SERTAD4-AS1Q5TG53 156 aa5.51□□□□□ -1.53
LINC02539-201ENST00000411615 SOSTDC1Q6X4U4 206 aa5.51□□□□□ -1.53
LINC02539-201ENST00000411615 C2orf91Q6ZV80 131 aa5.51□□□□□ -1.53
LINC02539-201ENST00000411615 LINC00518Q8N0U6 118 aa5.51□□□□□ -1.53
LINC02539-201ENST00000411615 DAND5Q8N907 189 aa5.51□□□□□ -1.53
LINC02539-201ENST00000411615 C12orf57Q99622 126 aa5.51□□□□□ -1.53
LINC02539-201ENST00000411615 C22orf24Q9Y442 160 aa5.51□□□□□ -1.53
LINC02539-201ENST00000411615 FAM168BA1KXE4 195 aa5.5□□□□□ -1.53
LINC02539-201ENST00000411615 EPPK1P58107 5090 aaKnown RBP5.5□□□□□ -1.53
LINC02539-201ENST00000411615 DNAH8Q96JB1 4490 aa5.49□□□□□ -1.53
LINC02539-201ENST00000411615 LRP1BQ9NZR2 4599 aa5.49□□□□□ -1.53
LINC02539-201ENST00000411615 M0R378 163 aa5.49□□□□□ -1.53
LINC02539-201ENST00000411615 FAM19A5Q7Z5A7 132 aaPredicted RBP5.49□□□□□ -1.53
LINC02539-201ENST00000411615 MRPL55Q7Z7F7 128 aaKnown RBP5.49□□□□□ -1.53
LINC02539-201ENST00000411615 MUSTN1Q8IVN3 82 aa5.49□□□□□ -1.53
LINC02539-201ENST00000411615 NKAPP1Q8N9T2 125 aa5.49□□□□□ -1.53
LINC02539-201ENST00000411615 HIST1H4GQ99525 98 aa5.49□□□□□ -1.53
LINC02539-201ENST00000411615 TSTD3H0UI37 97 aa5.48□□□□□ -1.53
LINC02539-201ENST00000411615 M0QXV9 152 aa5.48□□□□□ -1.53
LINC02539-201ENST00000411615 Q8NDZ9 215 aa5.48□□□□□ -1.53
LINC02539-201ENST00000411615 PHF5AQ7RTV0 110 aaKnown RBP5.47□□□□□ -1.53
LINC02539-201ENST00000411615 C7orf33Q8WU49 177 aa5.47□□□□□ -1.53
LINC02539-201ENST00000411615 LINC00167Q96N53 147 aa5.47□□□□□ -1.53
LINC02539-201ENST00000411615 CBY1Q9Y3M2 126 aa5.47□□□□□ -1.53
LINC02539-201ENST00000411615 HNRNPA3P51991 378 aaKnown RBP5.46□□□□□ -1.54
LINC02539-201ENST00000411615 NPC2P61916 151 aa5.46□□□□□ -1.54
LINC02539-201ENST00000411615 HSD52Q0P140 79 aa5.46□□□□□ -1.54
LINC02539-201ENST00000411615 CEND1Q8N111 149 aa5.46□□□□□ -1.54
LINC02539-201ENST00000411615 PRO1933Q9H354 126 aa5.46□□□□□ -1.54
LINC02539-201ENST00000411615 IGLV1-50A0A075B6I6 118 aa5.45□□□□□ -1.54
LINC02539-201ENST00000411615 IGKV2-28A0A075B6P5 120 aa5.45□□□□□ -1.54
LINC02539-201ENST00000411615 IGKV2D-28P01615 120 aa5.45□□□□□ -1.54
LINC02539-201ENST00000411615 PRR3P79522 188 aaKnown RBP5.45□□□□□ -1.54
LINC02539-201ENST00000411615 HAMPP81172 84 aa5.45□□□□□ -1.54
LINC02539-201ENST00000411615 Q8N1X5 172 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms