RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 NDUFA6P56556 154 aa8.18□□□□□ -1.1
HLA-DQB2-229ENST00000411527 TMEM238C9JI98 176 aa8.17□□□□□ -1.1
HLA-DQB2-229ENST00000411527 TSTD3H0UI37 97 aa8.17□□□□□ -1.1
HLA-DQB2-229ENST00000411527 ATP5LO75964 103 aa8.17□□□□□ -1.1
HLA-DQB2-229ENST00000411527 PFN2P35080 140 aa8.17□□□□□ -1.1
HLA-DQB2-229ENST00000411527 KIAA1644Q3SXP7 199 aa8.17□□□□□ -1.1
HLA-DQB2-229ENST00000411527 C3orf22Q8N5N4 141 aa8.17□□□□□ -1.1
HLA-DQB2-229ENST00000411527 TMEM126AQ9H061 195 aa8.17□□□□□ -1.1
HLA-DQB2-229ENST00000411527 CST9LQ9H4G1 147 aa8.17□□□□□ -1.1
HLA-DQB2-229ENST00000411527 PLEKHB2Q96CS7 222 aa8.16□□□□□ -1.1
HLA-DQB2-229ENST00000411527 MRPL18Q9H0U6 180 aaKnown RBP8.15□□□□□ -1.1
HLA-DQB2-229ENST00000411527 H3BRM9 83 aa8.14□□□□□ -1.11
HLA-DQB2-229ENST00000411527 VPREB1P12018 145 aa8.14□□□□□ -1.11
HLA-DQB2-229ENST00000411527 YPEL4Q96NS1 127 aa8.14□□□□□ -1.11
HLA-DQB2-229ENST00000411527 LINC01549A6NIU2 74 aa8.13□□□□□ -1.11
HLA-DQB2-229ENST00000411527 M0R378 163 aa8.13□□□□□ -1.11
HLA-DQB2-229ENST00000411527 PMVKQ15126 192 aa8.13□□□□□ -1.11
HLA-DQB2-229ENST00000411527 SND1-IT1Q9HBX3 110 aa8.13□□□□□ -1.11
HLA-DQB2-229ENST00000411527 RPL24P83731 157 aaKnown RBP8.12□□□□□ -1.11
HLA-DQB2-229ENST00000411527 SPAG11AQ6PDA7 123 aa8.12□□□□□ -1.11
HLA-DQB2-229ENST00000411527 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
HLA-DQB2-229ENST00000411527 LINC00337Q8N6G1 96 aa8.11□□□□□ -1.11
HLA-DQB2-229ENST00000411527 GNB1LQ9BYB4 327 aa8.11□□□□□ -1.11
HLA-DQB2-229ENST00000411527 ERG28Q9UKR5 140 aa8.11□□□□□ -1.11
HLA-DQB2-229ENST00000411527 LINC01546A6NGU7 62 aa8.1□□□□□ -1.11
HLA-DQB2-229ENST00000411527 C4orf48Q5BLP8 95 aa8.1□□□□□ -1.11
HLA-DQB2-229ENST00000411527 FP248Q71RG6 208 aaPredicted RBP8.1□□□□□ -1.11
HLA-DQB2-229ENST00000411527 IGLV5-39A0A0G2JS06 123 aa8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 HIST1H2BKO60814 126 aa8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 HIST1H2BJP06899 126 aa8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 HIST1H2BOP23527 126 aa8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 HIST1H2BBP33778 126 aa8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 HIST1H2BDP58876 126 aa8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 HIST1H2BCP62807 126 aa8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 HIST2H2BEQ16778 126 aa8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 HIST3H2BBQ8N257 126 aa8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 Q8NDZ9 215 aa8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 HIST1H2BHQ93079 126 aa8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 ZNF625Q96I27 306 aaPredicted RBP8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 HIST1H2BNQ99877 126 aa8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 HIST1H2BMQ99879 126 aa8.09□□□□□ -1.11
HLA-DQB2-229ENST00000411527 TRGC2P03986 189 aa8.08□□□□□ -1.12
HLA-DQB2-229ENST00000411527 COX17Q14061 63 aa8.08□□□□□ -1.12
HLA-DQB2-229ENST00000411527 PYY3Q5JQD4 70 aa8.08□□□□□ -1.12
HLA-DQB2-229ENST00000411527 SPRR4Q96PI1 79 aa8.08□□□□□ -1.12
HLA-DQB2-229ENST00000411527 IGLC3P0DOY3 106 aa8.07□□□□□ -1.12
HLA-DQB2-229ENST00000411527 FABP4P15090 132 aa8.07□□□□□ -1.12
HLA-DQB2-229ENST00000411527 DDTP30046 118 aa8.07□□□□□ -1.12
HLA-DQB2-229ENST00000411527 LINC01547P58512 204 aaPredicted RBP8.07□□□□□ -1.12
HLA-DQB2-229ENST00000411527 KRTAP13-3Q3SY46 172 aa8.07□□□□□ -1.12
HLA-DQB2-229ENST00000411527 ASB16-AS1Q495Z4 193 aa8.07□□□□□ -1.12
HLA-DQB2-229ENST00000411527 ZNF22P17026 224 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQB2-229ENST00000411527 FA2HQ7L5A8 372 aa8.06□□□□□ -1.12
HLA-DQB2-229ENST00000411527 DAND5Q8N907 189 aa8.06□□□□□ -1.12
HLA-DQB2-229ENST00000411527 JOSD1Q15040 202 aaPredicted RBP8.05□□□□□ -1.12
HLA-DQB2-229ENST00000411527 Q8NBF4 154 aa8.05□□□□□ -1.12
HLA-DQB2-229ENST00000411527 TRAV9-1A0A075B6T8 112 aa8.04□□□□□ -1.12
HLA-DQB2-229ENST00000411527 COA6Q5JTJ3 125 aaKnown RBP8.04□□□□□ -1.12
HLA-DQB2-229ENST00000411527 KRTAP4-1Q9BYQ7 146 aa8.04□□□□□ -1.12
HLA-DQB2-229ENST00000411527 ZNF706Q9Y5V0 76 aaPredicted RBP8.04□□□□□ -1.12
HLA-DQB2-229ENST00000411527 HIST1H2BLQ99880 126 aa8.03□□□□□ -1.12
HLA-DQB2-229ENST00000411527 LINC00158P58513 81 aa8.02□□□□□ -1.13
HLA-DQB2-229ENST00000411527 C14orf144Q96I85 54 aa8.02□□□□□ -1.13
HLA-DQB2-229ENST00000411527 SPINK1P00995 79 aa8.01□□□□□ -1.13
HLA-DQB2-229ENST00000411527 SEC61BP60468 96 aaKnown RBP8.01□□□□□ -1.13
HLA-DQB2-229ENST00000411527 SFTA2Q6UW10 78 aa8.01□□□□□ -1.13
HLA-DQB2-229ENST00000411527 A0A0U1RRA0 63 aa8□□□□□ -1.13
HLA-DQB2-229ENST00000411527 TMEM170BQ5T4T1 132 aa8□□□□□ -1.13
HLA-DQB2-229ENST00000411527 SMCR5Q8TEV8 140 aa8□□□□□ -1.13
HLA-DQB2-229ENST00000411527 A0A096LNJ9 63 aa7.99□□□□□ -1.13
HLA-DQB2-229ENST00000411527 C11orf86A6NJI1 115 aa7.99□□□□□ -1.13
HLA-DQB2-229ENST00000411527 COX19Q49B96 90 aa7.99□□□□□ -1.13
HLA-DQB2-229ENST00000411527 PRYO14603 147 aa7.98□□□□□ -1.13
HLA-DQB2-229ENST00000411527 BAGE3Q86Y29 109 aa7.98□□□□□ -1.13
HLA-DQB2-229ENST00000411527 TRAPPC1Q9Y5R8 145 aa7.98□□□□□ -1.13
HLA-DQB2-229ENST00000411527 M0R143 59 aa7.97□□□□□ -1.13
HLA-DQB2-229ENST00000411527 PRO1933Q9H354 126 aa7.97□□□□□ -1.13
HLA-DQB2-229ENST00000411527 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
HLA-DQB2-229ENST00000411527 ETDCA0A1B0GVM5 59 aa7.96□□□□□ -1.14
HLA-DQB2-229ENST00000411527 SCGB1D1O95968 90 aa7.96□□□□□ -1.14
HLA-DQB2-229ENST00000411527 HBDP02042 147 aa7.96□□□□□ -1.14
HLA-DQB2-229ENST00000411527 PMCHL1Q16048 86 aa7.96□□□□□ -1.14
HLA-DQB2-229ENST00000411527 BOD1L2Q8IYS8 172 aa7.96□□□□□ -1.14
HLA-DQB2-229ENST00000411527 URB1-AS1Q96HZ7 61 aa7.96□□□□□ -1.14
HLA-DQB2-229ENST00000411527 NDUFA12Q9UI09 145 aa7.96□□□□□ -1.14
HLA-DQB2-229ENST00000411527 A0A1B0GV90 55 aa7.95□□□□□ -1.14
HLA-DQB2-229ENST00000411527 NCR3O14931 201 aa7.95□□□□□ -1.14
HLA-DQB2-229ENST00000411527 LINC00614P0C842 121 aa7.95□□□□□ -1.14
HLA-DQB2-229ENST00000411527 SPRR1AP35321 89 aa7.95□□□□□ -1.14
HLA-DQB2-229ENST00000411527 GAGE2AQ6NT46 116 aa7.95□□□□□ -1.14
HLA-DQB2-229ENST00000411527 KCNQ1DNQ9H478 68 aa7.95□□□□□ -1.14
HLA-DQB2-229ENST00000411527 KRTAP4-16G5E9R7 235 aaPredicted RBP7.94□□□□□ -1.14
HLA-DQB2-229ENST00000411527 SMIM13P0DJ93 91 aa7.94□□□□□ -1.14
HLA-DQB2-229ENST00000411527 LINC00483Q53H64 154 aa7.94□□□□□ -1.14
HLA-DQB2-229ENST00000411527 IGLV9-49A0A0B4J1Y8 123 aa7.93□□□□□ -1.14
HLA-DQB2-229ENST00000411527 MOBPQ13875 183 aa7.93□□□□□ -1.14
HLA-DQB2-229ENST00000411527 Q8N377 158 aa7.93□□□□□ -1.14
HLA-DQB2-229ENST00000411527 C18orf32Q8TCD1 76 aa7.93□□□□□ -1.14
HLA-DQB2-229ENST00000411527 CHTOPQ9Y3Y2 248 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms