RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 IGHV3OR16-9A0A0B4J2B5 98 aa2.58□□□□□ -2
CLK1-203ENST00000409769 NBDYA0A0U1RRE5 68 aa2.58□□□□□ -2
CLK1-203ENST00000409769 TMEM223A0PJW6 202 aa2.58□□□□□ -2
CLK1-203ENST00000409769 C20orf202A1L168 122 aa2.58□□□□□ -2
CLK1-203ENST00000409769 H0Y8G0 127 aa2.58□□□□□ -2
CLK1-203ENST00000409769 DPM2O94777 84 aa2.58□□□□□ -2
CLK1-203ENST00000409769 IGKCP01834 107 aa2.58□□□□□ -2
CLK1-203ENST00000409769 ANGP03950 147 aaKnown RBP2.58□□□□□ -2
CLK1-203ENST00000409769 SMIM6P0DI80 62 aa2.58□□□□□ -2
CLK1-203ENST00000409769 ZNF22P17026 224 aaPredicted RBP2.58□□□□□ -2
CLK1-203ENST00000409769 PLNP26678 52 aa2.58□□□□□ -2
CLK1-203ENST00000409769 AKR1D1P51857 326 aa2.58□□□□□ -2
CLK1-203ENST00000409769 HERVK_113P63121 156 aa2.58□□□□□ -2
CLK1-203ENST00000409769 SEC11AP67812 179 aa2.58□□□□□ -2
CLK1-203ENST00000409769 MIAQ16674 131 aa2.58□□□□□ -2
CLK1-203ENST00000409769 CLPSL2Q6UWE3 100 aa2.58□□□□□ -2
CLK1-203ENST00000409769 UBE2DNLQ8IWF7 75 aa2.58□□□□□ -2
CLK1-203ENST00000409769 C10orf126Q8N4M7 172 aa2.58□□□□□ -2
CLK1-203ENST00000409769 UBE2WQ96B02 151 aa2.58□□□□□ -2
CLK1-203ENST00000409769 PMCHL2Q9BQD1 86 aa2.58□□□□□ -2
CLK1-203ENST00000409769 CHAC1Q9BUX1 264 aa2.58□□□□□ -2
CLK1-203ENST00000409769 DNAH5Q8TE73 4624 aa2.57□□□□□ -2
CLK1-203ENST00000409769 TRAV8-3A0A0A6YYJ7 113 aa2.57□□□□□ -2
CLK1-203ENST00000409769 IGKV3OR2-268A0A0C4DH90 116 aa2.57□□□□□ -2
CLK1-203ENST00000409769 CRPP02741 224 aa2.57□□□□□ -2
CLK1-203ENST00000409769 SS18Q15532 418 aa2.57□□□□□ -2
CLK1-203ENST00000409769 MAJINQ3KP22 176 aa2.57□□□□□ -2
CLK1-203ENST00000409769 Q6ZRN7 208 aaPredicted RBP2.57□□□□□ -2
CLK1-203ENST00000409769 ATOH7Q8N100 152 aa2.57□□□□□ -2
CLK1-203ENST00000409769 CHCHD10Q8WYQ3 142 aaPredicted RBP2.57□□□□□ -2
CLK1-203ENST00000409769 CDKN2A-AS1Q9UH64 79 aa2.57□□□□□ -2
CLK1-203ENST00000409769 IGLV10-54A0A075B6I4 117 aa2.56□□□□□ -2
CLK1-203ENST00000409769 IGKV2D-26A0A0A0MRZ7 120 aa2.56□□□□□ -2
CLK1-203ENST00000409769 IGHV1-58A0A0C4DH39 117 aa2.56□□□□□ -2
CLK1-203ENST00000409769 XCL1P47992 114 aa2.56□□□□□ -2
CLK1-203ENST00000409769 TTC32Q5I0X7 151 aa2.56□□□□□ -2
CLK1-203ENST00000409769 LINC00469Q8N7U9 141 aa2.56□□□□□ -2
CLK1-203ENST00000409769 GEMIN7Q9H840 131 aaKnown RBP2.56□□□□□ -2
CLK1-203ENST00000409769 FRAS1Q86XX4 4008 aa2.56□□□□□ -2
CLK1-203ENST00000409769 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
CLK1-203ENST00000409769 DNAH11Q96DT5 4516 aa2.56□□□□□ -2
CLK1-203ENST00000409769 IGKV2D-24A0A075B6R9 120 aa2.55□□□□□ -2
CLK1-203ENST00000409769 LCE6AA0A183 80 aa2.55□□□□□ -2
CLK1-203ENST00000409769 H3BRM9 83 aa2.55□□□□□ -2
CLK1-203ENST00000409769 COX7A2LO14548 114 aa2.55□□□□□ -2
CLK1-203ENST00000409769 LEPROTO15243 131 aa2.55□□□□□ -2
CLK1-203ENST00000409769 LY6G6CO95867 125 aa2.55□□□□□ -2
CLK1-203ENST00000409769 SPINK8P0C7L1 97 aa2.55□□□□□ -2
CLK1-203ENST00000409769 TSPEAR-AS2P59090 65 aa2.55□□□□□ -2
CLK1-203ENST00000409769 KIAA0087Q14695 138 aa2.55□□□□□ -2
CLK1-203ENST00000409769 SPATA45Q537H7 98 aa2.55□□□□□ -2
CLK1-203ENST00000409769 TMEM170BQ5T4T1 132 aa2.55□□□□□ -2
CLK1-203ENST00000409769 C5orf38Q86SI9 138 aa2.55□□□□□ -2
CLK1-203ENST00000409769 C15orf56Q8N910 161 aa2.55□□□□□ -2
CLK1-203ENST00000409769 RMI2Q96E14 147 aa2.55□□□□□ -2
CLK1-203ENST00000409769 HIST1H4GQ99525 98 aa2.55□□□□□ -2
CLK1-203ENST00000409769 C12orf57Q99622 126 aa2.55□□□□□ -2
CLK1-203ENST00000409769 VAMP8Q9BV40 100 aa2.55□□□□□ -2
CLK1-203ENST00000409769 RYR3Q15413 4870 aa2.55□□□□□ -2
CLK1-203ENST00000409769 FAT2Q9NYQ8 4349 aa2.55□□□□□ -2
CLK1-203ENST00000409769 IGHV3-64A0A075B6Q5 118 aa2.54□□□□□ -2
CLK1-203ENST00000409769 GVQW2A0A096LPI5 108 aaPredicted RBP2.54□□□□□ -2
CLK1-203ENST00000409769 LRCOL1A6NCL2 159 aa2.54□□□□□ -2
CLK1-203ENST00000409769 HSBP1L1C9JCN9 74 aa2.54□□□□□ -2
CLK1-203ENST00000409769 COX8AP10176 69 aa2.54□□□□□ -2
CLK1-203ENST00000409769 HERVK_113P61574 105 aa2.54□□□□□ -2
CLK1-203ENST00000409769 WFDC2Q14508 124 aa2.54□□□□□ -2
CLK1-203ENST00000409769 PCP2Q8IVA1 136 aa2.54□□□□□ -2
CLK1-203ENST00000409769 BOD1L2Q8IYS8 172 aa2.54□□□□□ -2
CLK1-203ENST00000409769 Q8IZM0 81 aa2.54□□□□□ -2
CLK1-203ENST00000409769 C6orf223Q8N319 242 aa2.54□□□□□ -2
CLK1-203ENST00000409769 MTURNQ8N3F0 131 aa2.54□□□□□ -2
CLK1-203ENST00000409769 PLEKHB2Q96CS7 222 aa2.54□□□□□ -2
CLK1-203ENST00000409769 ZNF625Q96I27 306 aaPredicted RBP2.54□□□□□ -2
CLK1-203ENST00000409769 TTTY13Q9BZ97 58 aa2.54□□□□□ -2
CLK1-203ENST00000409769 DNAH8Q96JB1 4490 aa2.54□□□□□ -2
CLK1-203ENST00000409769 J3QQQ9 107 aa2.53□□□□□ -2
CLK1-203ENST00000409769 M0R2N4 97 aa2.53□□□□□ -2
CLK1-203ENST00000409769 NDUFA1O15239 70 aa2.53□□□□□ -2
CLK1-203ENST00000409769 DLEU1O43261 78 aa2.53□□□□□ -2
CLK1-203ENST00000409769 APOMO95445 188 aa2.53□□□□□ -2
CLK1-203ENST00000409769 CXCL5P42830 114 aa2.53□□□□□ -2
CLK1-203ENST00000409769 NMUP48645 174 aa2.53□□□□□ -2
CLK1-203ENST00000409769 S100A12P80511 92 aa2.53□□□□□ -2
CLK1-203ENST00000409769 COX7B2Q8TF08 81 aa2.53□□□□□ -2
CLK1-203ENST00000409769 ORAOV1Q8WV07 137 aa2.53□□□□□ -2
CLK1-203ENST00000409769 TP73-AS1Q9UF72 201 aa2.53□□□□□ -2
CLK1-203ENST00000409769 MYMXA0A1B0GTQ4 84 aa2.52□□□□□ -2.01
CLK1-203ENST00000409769 ZNF815PA8K554 130 aa2.52□□□□□ -2.01
CLK1-203ENST00000409769 LGALS3P17931 250 aaKnown RBP2.52□□□□□ -2.01
CLK1-203ENST00000409769 SPAG11BQ08648 103 aa2.52□□□□□ -2.01
CLK1-203ENST00000409769 C1orf134Q5TEV5 83 aa2.52□□□□□ -2.01
CLK1-203ENST00000409769 C2orf91Q6ZV80 131 aa2.52□□□□□ -2.01
CLK1-203ENST00000409769 C14orf144Q96I85 54 aa2.52□□□□□ -2.01
CLK1-203ENST00000409769 TOMM7Q9P0U1 55 aa2.52□□□□□ -2.01
CLK1-203ENST00000409769 UQCR10Q9UDW1 63 aa2.52□□□□□ -2.01
CLK1-203ENST00000409769 NDUFA12Q9UI09 145 aa2.52□□□□□ -2.01
CLK1-203ENST00000409769 HECTD4Q9Y4D8 3996 aa2.52□□□□□ -2.01
CLK1-203ENST00000409769 DYNC1H1Q14204 4646 aaKnown RBP2.52□□□□□ -2.01
CLK1-203ENST00000409769 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms