RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SPATA8Q6RVD6 105 aa2.09□□□□□ -2.07
HMGB1P13-201ENST00000406019 TMEM14CQ9P0S9 112 aa2.09□□□□□ -2.07
HMGB1P13-201ENST00000406019 C4BP0C0L5 1744 aa2.08□□□□□ -2.08
HMGB1P13-201ENST00000406019 MED12Q93074 2177 aa2.08□□□□□ -2.08
HMGB1P13-201ENST00000406019 PRRC2BQ5JSZ5 2229 aaKnown RBP2.08□□□□□ -2.08
HMGB1P13-201ENST00000406019 KRTAP13-4Q3LI77 160 aa2.08□□□□□ -2.08
HMGB1P13-201ENST00000406019 Q6ZRN7 208 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P13-201ENST00000406019 UBL5Q9BZL1 73 aa2.08□□□□□ -2.08
HMGB1P13-201ENST00000406019 LINC00472Q9H8W2 130 aa2.08□□□□□ -2.08
HMGB1P13-201ENST00000406019 SDK1Q7Z5N4 2213 aa2.07□□□□□ -2.08
HMGB1P13-201ENST00000406019 ABCA4P78363 2273 aa2.07□□□□□ -2.08
HMGB1P13-201ENST00000406019 BRWD1Q9NSI6 2320 aa2.07□□□□□ -2.08
HMGB1P13-201ENST00000406019 TRBV6-1A0A0K0K1D8 114 aa2.07□□□□□ -2.08
HMGB1P13-201ENST00000406019 UQCR11O14957 56 aa2.07□□□□□ -2.08
HMGB1P13-201ENST00000406019 NDUFA3O95167 84 aa2.07□□□□□ -2.08
HMGB1P13-201ENST00000406019 PDE6GP18545 87 aa2.07□□□□□ -2.08
HMGB1P13-201ENST00000406019 PCOTHQ58A44 107 aa2.07□□□□□ -2.08
HMGB1P13-201ENST00000406019 ZNF625Q96I27 306 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P13-201ENST00000406019 R4GMQ9 66 aa2.07□□□□□ -2.08
HMGB1P13-201ENST00000406019 PLXNB2O15031 1838 aa2.07□□□□□ -2.08
HMGB1P13-201ENST00000406019 LMO7Q8WWI1 1683 aa2.06□□□□□ -2.08
HMGB1P13-201ENST00000406019 Q96NJ1 140 aa2.06□□□□□ -2.08
HMGB1P13-201ENST00000406019 WFDC10AQ9H1F0 79 aa2.06□□□□□ -2.08
HMGB1P13-201ENST00000406019 RP1P56715 2156 aa2.06□□□□□ -2.08
HMGB1P13-201ENST00000406019 DOCK10Q96BY6 2186 aa2.05□□□□□ -2.08
HMGB1P13-201ENST00000406019 IGKV2-29A2NJV5 120 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P13-201ENST00000406019 NDUFB1O75438 58 aa2.05□□□□□ -2.08
HMGB1P13-201ENST00000406019 PRB1P04280 392 aa2.05□□□□□ -2.08
HMGB1P13-201ENST00000406019 MGPP08493 103 aa2.05□□□□□ -2.08
HMGB1P13-201ENST00000406019 COA5Q86WW8 74 aa2.05□□□□□ -2.08
HMGB1P13-201ENST00000406019 GAFA1Q96PS6 74 aa2.05□□□□□ -2.08
HMGB1P13-201ENST00000406019 A0A0G2JMZ2 1700 aa2.05□□□□□ -2.08
HMGB1P13-201ENST00000406019 LRRC37A2A6NM11 1700 aa2.05□□□□□ -2.08
HMGB1P13-201ENST00000406019 LRRC37AA6NMS7 1700 aa2.05□□□□□ -2.08
HMGB1P13-201ENST00000406019 TRBV6-4A0A1B0GX49 114 aa2.04□□□□□ -2.08
HMGB1P13-201ENST00000406019 JMJD7-PLA2G4BH0Y9G9 81 aa2.04□□□□□ -2.08
HMGB1P13-201ENST00000406019 NDUFA4O00483 81 aa2.04□□□□□ -2.08
HMGB1P13-201ENST00000406019 RPL37AP61513 92 aaKnown RBP2.04□□□□□ -2.08
HMGB1P13-201ENST00000406019 DEFB112Q30KQ8 113 aa2.04□□□□□ -2.08
HMGB1P13-201ENST00000406019 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
HMGB1P13-201ENST00000406019 FREM1Q5H8C1 2179 aa2.04□□□□□ -2.08
HMGB1P13-201ENST00000406019 RPS27LQ71UM5 84 aaKnown RBP2.04□□□□□ -2.08
HMGB1P13-201ENST00000406019 UNC13CQ8NB66 2214 aa2.04□□□□□ -2.08
HMGB1P13-201ENST00000406019 ARFGEF3Q5TH69 2177 aa2.03□□□□□ -2.08
HMGB1P13-201ENST00000406019 FBN1P35555 2871 aaKnown RBP2.03□□□□□ -2.08
HMGB1P13-201ENST00000406019 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P13-201ENST00000406019 TRGV1A0A0A0MS02 117 aa2.03□□□□□ -2.08
HMGB1P13-201ENST00000406019 NCR3O14931 201 aa2.03□□□□□ -2.08
HMGB1P13-201ENST00000406019 KRTAP12-1P59990 96 aa2.03□□□□□ -2.08
HMGB1P13-201ENST00000406019 DEFB132Q7Z7B7 95 aa2.03□□□□□ -2.08
HMGB1P13-201ENST00000406019 C5orf56Q8N8D9 126 aa2.03□□□□□ -2.08
HMGB1P13-201ENST00000406019 IGKV2-40A0A087WW87 121 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P13-201ENST00000406019 IGKV2D-40P01614 121 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P13-201ENST00000406019 KRTAP12-4P60329 112 aa2.01□□□□□ -2.09
HMGB1P13-201ENST00000406019 TFF3Q07654 80 aa2.01□□□□□ -2.09
HMGB1P13-201ENST00000406019 HAMPP81172 84 aa2□□□□□ -2.09
HMGB1P13-201ENST00000406019 TRGV2A0A075B6R0 118 aa1.99□□□□□ -2.09
HMGB1P13-201ENST00000406019 CEP192Q8TEP8 1941 aa1.99□□□□□ -2.09
HMGB1P13-201ENST00000406019 LOC110117498A0A087WWA1 95 aa1.98□□□□□ -2.09
HMGB1P13-201ENST00000406019 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
HMGB1P13-201ENST00000406019 KCNQ1DNQ9H478 68 aa1.98□□□□□ -2.09
HMGB1P13-201ENST00000406019 TMEM167BQ9NRX6 74 aa1.98□□□□□ -2.09
HMGB1P13-201ENST00000406019 A0A1B0GU69 56 aa1.97□□□□□ -2.09
HMGB1P13-201ENST00000406019 IAPPP10997 89 aa1.97□□□□□ -2.09
HMGB1P13-201ENST00000406019 FXYD4P59646 89 aa1.97□□□□□ -2.09
HMGB1P13-201ENST00000406019 TTTY10Q9BZA0 68 aa1.97□□□□□ -2.09
HMGB1P13-201ENST00000406019 ETDCA0A1B0GVM5 59 aa1.96□□□□□ -2.1
HMGB1P13-201ENST00000406019 LOC730098B7Z3J9 87 aa1.96□□□□□ -2.1
HMGB1P13-201ENST00000406019 COX7BP24311 80 aa1.96□□□□□ -2.1
HMGB1P13-201ENST00000406019 RPL38P63173 70 aaKnown RBP1.96□□□□□ -2.1
HMGB1P13-201ENST00000406019 DEFB114Q30KQ6 69 aa1.96□□□□□ -2.1
HMGB1P13-201ENST00000406019 SPAG17Q6Q759 2223 aa1.96□□□□□ -2.1
HMGB1P13-201ENST00000406019 ANKRD17O75179 2603 aaKnown RBP1.95□□□□□ -2.1
HMGB1P13-201ENST00000406019 ALPK2Q86TB3 2170 aa1.95□□□□□ -2.1
HMGB1P13-201ENST00000406019 ACYP2P14621 99 aa1.95□□□□□ -2.1
HMGB1P13-201ENST00000406019 C10orf55Q5SWW7 151 aa1.95□□□□□ -2.1
HMGB1P13-201ENST00000406019 C4orf3Q8WVX3 66 aa1.95□□□□□ -2.1
HMGB1P13-201ENST00000406019 CPSF4LA6NMK7 179 aaKnown RBP1.94□□□□□ -2.1
HMGB1P13-201ENST00000406019 M0R2N4 97 aa1.94□□□□□ -2.1
HMGB1P13-201ENST00000406019 CRIP1P50238 77 aa1.94□□□□□ -2.1
HMGB1P13-201ENST00000406019 PRB3Q04118 309 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P13-201ENST00000406019 COX17Q14061 63 aa1.94□□□□□ -2.1
HMGB1P13-201ENST00000406019 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
HMGB1P13-201ENST00000406019 TNRC6CQ9HCJ0 1690 aaKnown RBP1.93□□□□□ -2.1
HMGB1P13-201ENST00000406019 G3V318 75 aa1.93□□□□□ -2.1
HMGB1P13-201ENST00000406019 ARHGAP5-AS1Q96IT6 56 aa1.93□□□□□ -2.1
HMGB1P13-201ENST00000406019 KMT2BQ9UMN6 2715 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P13-201ENST00000406019 H0YGX0 51 aa1.92□□□□□ -2.1
HMGB1P13-201ENST00000406019 SORL1Q92673 2214 aa1.91□□□□□ -2.1
HMGB1P13-201ENST00000406019 SSBP3-AS1Q7Z2R9 100 aa1.91□□□□□ -2.1
HMGB1P13-201ENST00000406019 LINC00308Q8TCZ7 52 aa1.91□□□□□ -2.1
HMGB1P13-201ENST00000406019 CCL19Q99731 98 aa1.91□□□□□ -2.1
HMGB1P13-201ENST00000406019 PRO3102Q9H379 93 aa1.91□□□□□ -2.1
HMGB1P13-201ENST00000406019 F5P12259 2224 aa1.9□□□□□ -2.1
HMGB1P13-201ENST00000406019 GOLGA4Q13439 2230 aaKnown RBP1.9□□□□□ -2.1
HMGB1P13-201ENST00000406019 J3QKU1 62 aa1.9□□□□□ -2.11
HMGB1P13-201ENST00000406019 Q6ZQY7 126 aa1.9□□□□□ -2.11
HMGB1P13-201ENST00000406019 SMIM2Q9BVW6 85 aa1.9□□□□□ -2.11
HMGB1P13-201ENST00000406019 CRIPTQ9P021 101 aa1.9□□□□□ -2.11
HMGB1P13-201ENST00000406019 TNCP24821 2201 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms