RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 C11orf68Q9H3H3 251 aaKnown RBP2.57□□□□□ -2
RTN4-209ENST00000405240 TRRAPQ9Y4A5 3859 aa2.57□□□□□ -2
RTN4-209ENST00000405240 SPAG11BQ08648 103 aa2.57□□□□□ -2
RTN4-209ENST00000405240 FAM208BQ5VWN6 2430 aa2.57□□□□□ -2
RTN4-209ENST00000405240 INAFM1C9JVW0 142 aa2.57□□□□□ -2
RTN4-209ENST00000405240 ZNF561-AS1K7EIQ3 104 aa2.57□□□□□ -2
RTN4-209ENST00000405240 DEFB4AO15263 64 aa2.57□□□□□ -2
RTN4-209ENST00000405240 BCE1O60756 84 aa2.57□□□□□ -2
RTN4-209ENST00000405240 C6orf99Q4VX62 202 aa2.57□□□□□ -2
RTN4-209ENST00000405240 MYO9AB2RTY4 2548 aa2.56□□□□□ -2
RTN4-209ENST00000405240 IGLV10-54A0A075B6I4 117 aa2.56□□□□□ -2
RTN4-209ENST00000405240 hADV29S1A0JD25 119 aa2.56□□□□□ -2
RTN4-209ENST00000405240 VPREB1P12018 145 aa2.56□□□□□ -2
RTN4-209ENST00000405240 ELOF1P60002 83 aaKnown RBP2.56□□□□□ -2
RTN4-209ENST00000405240 S100A7L2Q5SY68 101 aa2.56□□□□□ -2
RTN4-209ENST00000405240 C15orf56Q8N910 161 aa2.56□□□□□ -2
RTN4-209ENST00000405240 OTOGQ6ZRI0 2925 aa2.56□□□□□ -2
RTN4-209ENST00000405240 TRBV7-4A0A0J9YYF1 115 aa2.56□□□□□ -2
RTN4-209ENST00000405240 KRTAP10-11P60412 298 aa2.56□□□□□ -2
RTN4-209ENST00000405240 DYNC2H1Q8NCM8 4307 aaKnown RBP2.56□□□□□ -2
RTN4-209ENST00000405240 VWFP04275 2813 aa2.55□□□□□ -2
RTN4-209ENST00000405240 TLN2Q9Y4G6 2542 aa2.55□□□□□ -2
RTN4-209ENST00000405240 PDE6GP18545 87 aa2.55□□□□□ -2
RTN4-209ENST00000405240 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.55□□□□□ -2
RTN4-209ENST00000405240 SERP2Q8N6R1 65 aa2.55□□□□□ -2
RTN4-209ENST00000405240 KLK12Q9UKR0 248 aa2.55□□□□□ -2
RTN4-209ENST00000405240 ITPR2Q14571 2701 aa2.55□□□□□ -2
RTN4-209ENST00000405240 TRAV23DV6A0A075B6W5 121 aa2.55□□□□□ -2
RTN4-209ENST00000405240 RPS28P62857 69 aaKnown RBP2.55□□□□□ -2
RTN4-209ENST00000405240 PLA2G2DQ9UNK4 145 aa2.55□□□□□ -2
RTN4-209ENST00000405240 ZFYVE26Q68DK2 2539 aa2.55□□□□□ -2
RTN4-209ENST00000405240 TLX1NBP0CAT3 122 aa2.54□□□□□ -2
RTN4-209ENST00000405240 LINC00528Q8N1L1 170 aa2.54□□□□□ -2
RTN4-209ENST00000405240 CYSTM1Q9H1C7 97 aa2.54□□□□□ -2
RTN4-209ENST00000405240 IGKV3D-7A0A0C4DH55 119 aa2.54□□□□□ -2
RTN4-209ENST00000405240 USP17L23D6RBM5 183 aa2.54□□□□□ -2
RTN4-209ENST00000405240 RBM3P98179 157 aaKnown RBP2.54□□□□□ -2
RTN4-209ENST00000405240 LINC01556Q5JQF7 62 aa2.54□□□□□ -2
RTN4-209ENST00000405240 WFDC10BQ8IUB3 73 aa2.54□□□□□ -2
RTN4-209ENST00000405240 IGLV5-37A0A075B6J1 123 aa2.54□□□□□ -2
RTN4-209ENST00000405240 M0R2N4 97 aa2.54□□□□□ -2
RTN4-209ENST00000405240 M0R378 163 aa2.54□□□□□ -2
RTN4-209ENST00000405240 ZNF73O43830 326 aaPredicted RBP2.54□□□□□ -2
RTN4-209ENST00000405240 CXCL6P80162 114 aa2.54□□□□□ -2
RTN4-209ENST00000405240 KPRPQ5T749 579 aaPredicted RBP2.54□□□□□ -2
RTN4-209ENST00000405240 C9orf153Q5TBE3 101 aa2.54□□□□□ -2
RTN4-209ENST00000405240 A0A087WVE0 104 aa2.53□□□□□ -2
RTN4-209ENST00000405240 NDUFC2-KCTD14E9PQ53 114 aa2.53□□□□□ -2
RTN4-209ENST00000405240 ESRGQ1W209 222 aa2.53□□□□□ -2
RTN4-209ENST00000405240 DIRC1Q969H9 104 aa2.53□□□□□ -2
RTN4-209ENST00000405240 JMJD1CQ15652 2540 aa2.53□□□□□ -2
RTN4-209ENST00000405240 SONP18583 2426 aaKnown RBP2.53□□□□□ -2
RTN4-209ENST00000405240 UNC79Q9P2D8 2635 aa2.53□□□□□ -2
RTN4-209ENST00000405240 Q6ZRU5 148 aa2.53□□□□□ -2
RTN4-209ENST00000405240 KCNQ1DNQ9H478 68 aa2.53□□□□□ -2
RTN4-209ENST00000405240 TENM1Q9UKZ4 2725 aa2.53□□□□□ -2
RTN4-209ENST00000405240 KRTAP4-16G5E9R7 235 aaPredicted RBP2.53□□□□□ -2
RTN4-209ENST00000405240 DNAH10OSP0CZ25 163 aa2.53□□□□□ -2
RTN4-209ENST00000405240 COX7BP24311 80 aa2.53□□□□□ -2
RTN4-209ENST00000405240 HUWE1Q7Z6Z7 4374 aaKnown RBP2.53□□□□□ -2.01
RTN4-209ENST00000405240 LINC01547P58512 204 aaPredicted RBP2.52□□□□□ -2.01
RTN4-209ENST00000405240 Q6ZQY7 126 aa2.52□□□□□ -2.01
RTN4-209ENST00000405240 HIVEP1P15822 2718 aa2.52□□□□□ -2.01
RTN4-209ENST00000405240 EPM2AB3EWF7 344 aa2.52□□□□□ -2.01
RTN4-209ENST00000405240 Q6ZRP5 223 aa2.52□□□□□ -2.01
RTN4-209ENST00000405240 Q6ZVQ6 151 aa2.52□□□□□ -2.01
RTN4-209ENST00000405240 FAM19A1Q7Z5A9 133 aa2.52□□□□□ -2.01
RTN4-209ENST00000405240 SPRR1AP35321 89 aa2.52□□□□□ -2.01
RTN4-209ENST00000405240 TMEM258P61165 79 aa2.52□□□□□ -2.01
RTN4-209ENST00000405240 Q6ZTC4 211 aa2.52□□□□□ -2.01
RTN4-209ENST00000405240 UBL5Q9BZL1 73 aa2.52□□□□□ -2.01
RTN4-209ENST00000405240 NSD1Q96L73 2696 aaPredicted RBP2.52□□□□□ -2.01
RTN4-209ENST00000405240 GHRHP01286 108 aa2.52□□□□□ -2.01
RTN4-209ENST00000405240 MDFIQ99750 246 aa2.52□□□□□ -2.01
RTN4-209ENST00000405240 RETNQ9HD89 108 aa2.52□□□□□ -2.01
RTN4-209ENST00000405240 IGLV5-48A0A075B6I7 105 aa2.51□□□□□ -2.01
RTN4-209ENST00000405240 LOC107984640A0A0U1RRK4 108 aa2.51□□□□□ -2.01
RTN4-209ENST00000405240 KRTAP7-1Q8IUC3 87 aa2.51□□□□□ -2.01
RTN4-209ENST00000405240 SMIM20Q8N5G0 67 aa2.51□□□□□ -2.01
RTN4-209ENST00000405240 CAMK2N2Q96S95 79 aa2.51□□□□□ -2.01
RTN4-209ENST00000405240 XAGE1AQ9HD64 81 aa2.51□□□□□ -2.01
RTN4-209ENST00000405240 GCN1Q92616 2671 aaKnown RBP2.51□□□□□ -2.01
RTN4-209ENST00000405240 ACANP16112 2415 aa2.51□□□□□ -2.01
RTN4-209ENST00000405240 HTN3P15516 51 aa2.51□□□□□ -2.01
RTN4-209ENST00000405240 A0A1B0GW54 56 aa2.51□□□□□ -2.01
RTN4-209ENST00000405240 TNP2Q05952 138 aa2.51□□□□□ -2.01
RTN4-209ENST00000405240 C3orf56Q8N813 242 aa2.51□□□□□ -2.01
RTN4-209ENST00000405240 DPH3Q96FX2 82 aa2.51□□□□□ -2.01
RTN4-209ENST00000405240 DSCR8Q96T75 97 aa2.51□□□□□ -2.01
RTN4-209ENST00000405240 HIGD2BQ4VC39 106 aa2.5□□□□□ -2.01
RTN4-209ENST00000405240 TRAV7A0A075B6U4 112 aa2.5□□□□□ -2.01
RTN4-209ENST00000405240 J3QL48 77 aa2.5□□□□□ -2.01
RTN4-209ENST00000405240 SYCNQ0VAF6 134 aa2.5□□□□□ -2.01
RTN4-209ENST00000405240 KLKP1Q107X0 134 aa2.5□□□□□ -2.01
RTN4-209ENST00000405240 SERTAD4-AS1Q5TG53 156 aa2.5□□□□□ -2.01
RTN4-209ENST00000405240 LAMTOR3Q9UHA4 124 aa2.5□□□□□ -2.01
RTN4-209ENST00000405240 CCDC168Q8NDH2 2452 aa2.5□□□□□ -2.01
RTN4-209ENST00000405240 FN1P02751 2386 aaKnown RBP2.5□□□□□ -2.01
RTN4-209ENST00000405240 LYSTQ99698 3801 aa2.5□□□□□ -2.01
RTN4-209ENST00000405240 NBEAL2Q6ZNJ1 2754 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms