RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 ERG28Q9UKR5 140 aa11.16□□□□□ -0.62
HDAC11-204ENST00000404040 TMA7Q9Y2S6 64 aaKnown RBP11.16□□□□□ -0.62
HDAC11-204ENST00000404040 GAGE2EQ4V326 116 aa11.15□□□□□ -0.62
HDAC11-204ENST00000404040 GAGE2DQ9UEU5 116 aa11.15□□□□□ -0.62
HDAC11-204ENST00000404040 STPG4Q8N801 248 aa11.14□□□□□ -0.63
HDAC11-204ENST00000404040 KRTAP10-8P60410 259 aa11.13□□□□□ -0.63
HDAC11-204ENST00000404040 HSBP1L1C9JCN9 74 aa11.12□□□□□ -0.63
HDAC11-204ENST00000404040 SCGB1D1O95968 90 aa11.12□□□□□ -0.63
HDAC11-204ENST00000404040 PFN2P35080 140 aa11.12□□□□□ -0.63
HDAC11-204ENST00000404040 MEIG1Q5JSS6 88 aa11.12□□□□□ -0.63
HDAC11-204ENST00000404040 REG3GQ6UW15 175 aa11.12□□□□□ -0.63
HDAC11-204ENST00000404040 TSPEAR-AS2P59090 65 aa11.11□□□□□ -0.63
HDAC11-204ENST00000404040 SPINK6Q6UWN8 80 aa11.11□□□□□ -0.63
HDAC11-204ENST00000404040 ATOH7Q8N100 152 aa11.1□□□□□ -0.63
HDAC11-204ENST00000404040 LINC00158P58513 81 aa11.09□□□□□ -0.63
HDAC11-204ENST00000404040 C9orf129Q5T035 196 aaKnown RBP11.07□□□□□ -0.64
HDAC11-204ENST00000404040 XAGE1AQ9HD64 81 aa11.06□□□□□ -0.64
HDAC11-204ENST00000404040 ZNF815PA8K554 130 aa11.05□□□□□ -0.64
HDAC11-204ENST00000404040 SMIM13P0DJ93 91 aa11.05□□□□□ -0.64
HDAC11-204ENST00000404040 SRSF9Q13242 221 aaKnown RBP eCLIP11.05□□□□□ -0.64
HDAC11-204ENST00000404040 JOSD1Q15040 202 aaPredicted RBP11.05□□□□□ -0.64
HDAC11-204ENST00000404040 LPAP08519 4548 aa11.04□□□□□ -0.64
HDAC11-204ENST00000404040 IGKV2D-26A0A0A0MRZ7 120 aa11.04□□□□□ -0.64
HDAC11-204ENST00000404040 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
HDAC11-204ENST00000404040 ANKRD39Q53RE8 183 aa11.04□□□□□ -0.64
HDAC11-204ENST00000404040 SND1-IT1Q9HBX3 110 aa11.04□□□□□ -0.64
HDAC11-204ENST00000404040 FAM19A5Q7Z5A7 132 aaPredicted RBP11.03□□□□□ -0.64
HDAC11-204ENST00000404040 A0A0J9YXY3 114 aa11.02□□□□□ -0.65
HDAC11-204ENST00000404040 A0A0U1RRA0 63 aa11.02□□□□□ -0.65
HDAC11-204ENST00000404040 RPL24P83731 157 aaKnown RBP11.02□□□□□ -0.65
HDAC11-204ENST00000404040 MIR7-3HGQ8N6C7 128 aa11.02□□□□□ -0.65
HDAC11-204ENST00000404040 FAM168BA1KXE4 195 aa11.01□□□□□ -0.65
HDAC11-204ENST00000404040 TIMM17BO60830 172 aa11.01□□□□□ -0.65
HDAC11-204ENST00000404040 TP73-AS1Q9UF72 201 aa11.01□□□□□ -0.65
HDAC11-204ENST00000404040 M0QXV9 152 aa11□□□□□ -0.65
HDAC11-204ENST00000404040 LBHQ53QV2 105 aaPredicted RBP11□□□□□ -0.65
HDAC11-204ENST00000404040 SCGB1D4Q6XE38 83 aa11□□□□□ -0.65
HDAC11-204ENST00000404040 NKAPP1Q8N9T2 125 aa10.99□□□□□ -0.65
HDAC11-204ENST00000404040 MIEN1Q9BRT3 115 aa10.99□□□□□ -0.65
HDAC11-204ENST00000404040 IGLV5-37A0A075B6J1 123 aa10.98□□□□□ -0.65
HDAC11-204ENST00000404040 TMEM238C9JI98 176 aa10.97□□□□□ -0.65
HDAC11-204ENST00000404040 VAMP8Q9BV40 100 aa10.97□□□□□ -0.65
HDAC11-204ENST00000404040 TTTY13Q9BZ97 58 aa10.97□□□□□ -0.65
HDAC11-204ENST00000404040 C22orf24Q9Y442 160 aa10.97□□□□□ -0.65
HDAC11-204ENST00000404040 LOC107984156A0A0G2JMH3 177 aa10.96□□□□□ -0.65
HDAC11-204ENST00000404040 PHF5AQ7RTV0 110 aaKnown RBP10.96□□□□□ -0.65
HDAC11-204ENST00000404040 PCP2Q8IVA1 136 aa10.96□□□□□ -0.65
HDAC11-204ENST00000404040 ARL17AQ8IVW1 177 aa10.96□□□□□ -0.65
HDAC11-204ENST00000404040 COPS9Q8WXC6 57 aa10.96□□□□□ -0.65
HDAC11-204ENST00000404040 UBE2BP63146 152 aa10.95□□□□□ -0.66
HDAC11-204ENST00000404040 MRPL55Q7Z7F7 128 aaKnown RBP10.95□□□□□ -0.66
HDAC11-204ENST00000404040 KRTAP7-1Q8IUC3 87 aa10.95□□□□□ -0.66
HDAC11-204ENST00000404040 Q6ZVH6 145 aa10.94□□□□□ -0.66
HDAC11-204ENST00000404040 BOD1L2Q8IYS8 172 aa10.94□□□□□ -0.66
HDAC11-204ENST00000404040 VPREB1P12018 145 aa10.93□□□□□ -0.66
HDAC11-204ENST00000404040 DAND5Q8N907 189 aa10.93□□□□□ -0.66
HDAC11-204ENST00000404040 SPATA45Q537H7 98 aa10.92□□□□□ -0.66
HDAC11-204ENST00000404040 PYY3Q5JQD4 70 aa10.92□□□□□ -0.66
HDAC11-204ENST00000404040 ADAMTSL4-AS1Q5T5F5 129 aa10.92□□□□□ -0.66
HDAC11-204ENST00000404040 LITAFQ99732 161 aa10.92□□□□□ -0.66
HDAC11-204ENST00000404040 PAM16Q9Y3D7 125 aa10.92□□□□□ -0.66
HDAC11-204ENST00000404040 COX8AP10176 69 aa10.91□□□□□ -0.66
HDAC11-204ENST00000404040 SPANXDQ9BXN6 97 aa10.91□□□□□ -0.66
HDAC11-204ENST00000404040 SPANXCQ9NY87 97 aa10.91□□□□□ -0.66
HDAC11-204ENST00000404040 DLEU1O43261 78 aa10.9□□□□□ -0.66
HDAC11-204ENST00000404040 NDUFC2O95298 119 aa10.9□□□□□ -0.66
HDAC11-204ENST00000404040 PSORS1C2Q9UIG4 136 aa10.9□□□□□ -0.66
HDAC11-204ENST00000404040 M0R378 163 aa10.89□□□□□ -0.67
HDAC11-204ENST00000404040 IFITM1P13164 125 aa10.89□□□□□ -0.67
HDAC11-204ENST00000404040 LINC00308Q8TCZ7 52 aa10.89□□□□□ -0.67
HDAC11-204ENST00000404040 LINC00167Q96N53 147 aa10.89□□□□□ -0.67
HDAC11-204ENST00000404040 PPDPFQ9H3Y8 114 aa10.89□□□□□ -0.67
HDAC11-204ENST00000404040 MUC2Q02817 5179 aa10.89□□□□□ -0.67
HDAC11-204ENST00000404040 S100A12P80511 92 aa10.88□□□□□ -0.67
HDAC11-204ENST00000404040 TRBV10-2A0A0K0K1G8 114 aa10.87□□□□□ -0.67
HDAC11-204ENST00000404040 SPANXB1Q9NS25 103 aaPredicted RBP10.87□□□□□ -0.67
HDAC11-204ENST00000404040 NPC2P61916 151 aa10.86□□□□□ -0.67
HDAC11-204ENST00000404040 GAGE10A6NGK3 116 aa10.85□□□□□ -0.67
HDAC11-204ENST00000404040 C1orf137Q5JT78 98 aa10.85□□□□□ -0.67
HDAC11-204ENST00000404040 SLC25A34Q6PIV7 304 aa10.85□□□□□ -0.67
HDAC11-204ENST00000404040 IGLV1-50A0A075B6I6 118 aa10.84□□□□□ -0.67
HDAC11-204ENST00000404040 RPL37AP8A6NKH3 93 aa10.84□□□□□ -0.67
HDAC11-204ENST00000404040 NCR3O14931 201 aa10.84□□□□□ -0.67
HDAC11-204ENST00000404040 SOSTDC1Q6X4U4 206 aa10.84□□□□□ -0.67
HDAC11-204ENST00000404040 PRR26Q8N8Z3 221 aa10.84□□□□□ -0.67
HDAC11-204ENST00000404040 Q8NDZ9 215 aa10.84□□□□□ -0.67
HDAC11-204ENST00000404040 C14orf144Q96I85 54 aa10.84□□□□□ -0.67
HDAC11-204ENST00000404040 LINC00518Q8N0U6 118 aa10.83□□□□□ -0.68
HDAC11-204ENST00000404040 CBY1Q9Y3M2 126 aa10.83□□□□□ -0.68
HDAC11-204ENST00000404040 DIRC1Q969H9 104 aa10.82□□□□□ -0.68
HDAC11-204ENST00000404040 IGKV2-28A0A075B6P5 120 aa10.81□□□□□ -0.68
HDAC11-204ENST00000404040 IGKV2D-28P01615 120 aa10.81□□□□□ -0.68
HDAC11-204ENST00000404040 SMIM6P0DI80 62 aa10.81□□□□□ -0.68
HDAC11-204ENST00000404040 S100A7L2Q5SY68 101 aa10.81□□□□□ -0.68
HDAC11-204ENST00000404040 IGLV7-43P04211 117 aa10.8□□□□□ -0.68
HDAC11-204ENST00000404040 KRTAP11-1Q8IUC1 163 aa10.8□□□□□ -0.68
HDAC11-204ENST00000404040 MUSTN1Q8IVN3 82 aa10.8□□□□□ -0.68
HDAC11-204ENST00000404040 HIGD1BQ9P298 99 aa10.8□□□□□ -0.68
HDAC11-204ENST00000404040 EIF4EBP3O60516 100 aaPredicted RBP10.79□□□□□ -0.68
HDAC11-204ENST00000404040 DDTP30046 118 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms