RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 PRO0628Q9UI54 55 aa11.47□□□□□ -0.57
TSC2-204ENST00000401874 LINC00167Q96N53 147 aa11.46□□□□□ -0.57
TSC2-204ENST00000401874 PCSK5Q92824 1860 aa11.46□□□□□ -0.57
TSC2-204ENST00000401874 C1orf64Q8NEQ6 169 aa11.46□□□□□ -0.58
TSC2-204ENST00000401874 BPTFQ12830 3046 aa11.44□□□□□ -0.58
TSC2-204ENST00000401874 DNAH12Q6ZR08 3092 aa11.42□□□□□ -0.58
TSC2-204ENST00000401874 FSHBP01225 129 aa11.42□□□□□ -0.58
TSC2-204ENST00000401874 LIMD2Q9BT23 127 aa11.42□□□□□ -0.58
TSC2-204ENST00000401874 GVQW2A0A096LPI5 108 aaPredicted RBP11.4□□□□□ -0.58
TSC2-204ENST00000401874 Q6ZRX8 168 aa11.4□□□□□ -0.58
TSC2-204ENST00000401874 Q8NBF4 154 aa11.4□□□□□ -0.58
TSC2-204ENST00000401874 C1orf134Q5TEV5 83 aa11.4□□□□□ -0.59
TSC2-204ENST00000401874 TP53AIP1Q9HCN2 124 aa11.39□□□□□ -0.59
TSC2-204ENST00000401874 RETNLBQ9BQ08 111 aa11.37□□□□□ -0.59
TSC2-204ENST00000401874 H3BPC8 53 aa11.36□□□□□ -0.59
TSC2-204ENST00000401874 Q8NAQ8 132 aa11.35□□□□□ -0.59
TSC2-204ENST00000401874 IGLV6-57P01721 117 aa11.34□□□□□ -0.59
TSC2-204ENST00000401874 NHLRC4P0CG21 123 aaPredicted RBP11.34□□□□□ -0.59
TSC2-204ENST00000401874 USP9XQ93008 2570 aaPredicted RBP11.34□□□□□ -0.59
TSC2-204ENST00000401874 LINC00476Q8WZB0 136 aa11.34□□□□□ -0.59
TSC2-204ENST00000401874 C4orf26Q17RF5 130 aa11.32□□□□□ -0.6
TSC2-204ENST00000401874 TM2D3Q9BRN9 247 aa11.31□□□□□ -0.6
TSC2-204ENST00000401874 ABCA12Q86UK0 2595 aa11.31□□□□□ -0.6
TSC2-204ENST00000401874 VPREB1P12018 145 aa11.29□□□□□ -0.6
TSC2-204ENST00000401874 PCNTO95613 3336 aa11.28□□□□□ -0.6
TSC2-204ENST00000401874 SPINK1P00995 79 aa11.27□□□□□ -0.6
TSC2-204ENST00000401874 MDFIQ99750 246 aa11.27□□□□□ -0.61
TSC2-204ENST00000401874 C16orf90A8MZG2 172 aa11.27□□□□□ -0.61
TSC2-204ENST00000401874 ANKRD11Q6UB99 2663 aaPredicted RBP11.26□□□□□ -0.61
TSC2-204ENST00000401874 MOBPQ13875 183 aa11.26□□□□□ -0.61
TSC2-204ENST00000401874 ST20-AS1Q8NBB2 130 aa11.26□□□□□ -0.61
TSC2-204ENST00000401874 CSNK1G2-AS1Q8NCQ2 148 aa11.26□□□□□ -0.61
TSC2-204ENST00000401874 CEP295Q9C0D2 2601 aa11.26□□□□□ -0.61
TSC2-204ENST00000401874 TRBV7-4A0A0J9YYF1 115 aa11.26□□□□□ -0.61
TSC2-204ENST00000401874 ERC2-IT1O76042 136 aa11.26□□□□□ -0.61
TSC2-204ENST00000401874 CENPFP49454 3210 aa11.25□□□□□ -0.61
TSC2-204ENST00000401874 Q6ZRP5 223 aa11.25□□□□□ -0.61
TSC2-204ENST00000401874 EIF4EBP3O60516 100 aaPredicted RBP11.25□□□□□ -0.61
TSC2-204ENST00000401874 FN1P02751 2386 aaKnown RBP11.24□□□□□ -0.61
TSC2-204ENST00000401874 TLN2Q9Y4G6 2542 aa11.24□□□□□ -0.61
TSC2-204ENST00000401874 MUC4Q99102 2169 aa11.24□□□□□ -0.61
TSC2-204ENST00000401874 ACYP2P14621 99 aa11.24□□□□□ -0.61
TSC2-204ENST00000401874 PHF5AQ7RTV0 110 aaKnown RBP11.24□□□□□ -0.61
TSC2-204ENST00000401874 EPM2AB3EWF7 344 aa11.23□□□□□ -0.61
TSC2-204ENST00000401874 TRAV22A0A0B4J277 110 aa11.23□□□□□ -0.61
TSC2-204ENST00000401874 LINC00588Q9Y4M8 146 aa11.22□□□□□ -0.61
TSC2-204ENST00000401874 IGKV2D-30A0A075B6S6 120 aa11.21□□□□□ -0.61
TSC2-204ENST00000401874 IGKV2-30P06310 120 aa11.21□□□□□ -0.61
TSC2-204ENST00000401874 HTTP42858 3142 aa11.21□□□□□ -0.61
TSC2-204ENST00000401874 USP9YO00507 2555 aaPredicted RBP11.21□□□□□ -0.61
TSC2-204ENST00000401874 DNAH10OSP0CZ25 163 aa11.21□□□□□ -0.62
TSC2-204ENST00000401874 A0A1B0GU69 56 aa11.2□□□□□ -0.62
TSC2-204ENST00000401874 KCNQ1DNQ9H478 68 aa11.19□□□□□ -0.62
TSC2-204ENST00000401874 JMJD1CQ15652 2540 aa11.18□□□□□ -0.62
TSC2-204ENST00000401874 C7orf65Q6ZTY9 151 aa11.18□□□□□ -0.62
TSC2-204ENST00000401874 LINC00528Q8N1L1 170 aa11.18□□□□□ -0.62
TSC2-204ENST00000401874 CEP350Q5VT06 3117 aa11.18□□□□□ -0.62
TSC2-204ENST00000401874 LRRK2Q5S007 2527 aa11.18□□□□□ -0.62
TSC2-204ENST00000401874 IGLV1-50A0A075B6I6 118 aa11.16□□□□□ -0.62
TSC2-204ENST00000401874 RPL37AP61513 92 aaKnown RBP11.15□□□□□ -0.62
TSC2-204ENST00000401874 SERTAD4-AS1Q5TG53 156 aa11.15□□□□□ -0.62
TSC2-204ENST00000401874 PRR34Q9NV39 138 aa11.15□□□□□ -0.62
TSC2-204ENST00000401874 NBDYA0A0U1RRE5 68 aa11.14□□□□□ -0.63
TSC2-204ENST00000401874 SPAG11AQ6PDA7 123 aa11.14□□□□□ -0.63
TSC2-204ENST00000401874 A8MWP4 228 aa11.14□□□□□ -0.63
TSC2-204ENST00000401874 KRTAP24-1Q3LI83 254 aa11.14□□□□□ -0.63
TSC2-204ENST00000401874 K7EQZ3 153 aa11.13□□□□□ -0.63
TSC2-204ENST00000401874 LINC00612Q8N6U2 182 aa11.13□□□□□ -0.63
TSC2-204ENST00000401874 SPACA4Q8TDM5 124 aa11.12□□□□□ -0.63
TSC2-204ENST00000401874 A0A096LNT2 108 aa11.12□□□□□ -0.63
TSC2-204ENST00000401874 FAM168BA1KXE4 195 aa11.12□□□□□ -0.63
TSC2-204ENST00000401874 GIG44P09565 113 aaPredicted RBP11.12□□□□□ -0.63
TSC2-204ENST00000401874 KLKP1Q107X0 134 aa11.12□□□□□ -0.63
TSC2-204ENST00000401874 RTL8CO15255 209 aa11.11□□□□□ -0.63
TSC2-204ENST00000401874 SETD2Q9BYW2 2564 aaPredicted RBP11.11□□□□□ -0.63
TSC2-204ENST00000401874 C19orf73Q9NVV2 129 aa11.1□□□□□ -0.63
TSC2-204ENST00000401874 LINC00313P59037 77 aa11.09□□□□□ -0.63
TSC2-204ENST00000401874 LOC101927531A0A1B0GV80 90 aa11.09□□□□□ -0.63
TSC2-204ENST00000401874 ZFYVE26Q68DK2 2539 aa11.07□□□□□ -0.64
TSC2-204ENST00000401874 C15orf56Q8N910 161 aa11.07□□□□□ -0.64
TSC2-204ENST00000401874 CHTF8P0CG12 524 aa11.07□□□□□ -0.64
TSC2-204ENST00000401874 PKD1L2Q7Z442 2459 aa11.06□□□□□ -0.64
TSC2-204ENST00000401874 DOPEY1Q5JWR5 2465 aa11.05□□□□□ -0.64
TSC2-204ENST00000401874 C8orf87E5RJ46 101 aa11.05□□□□□ -0.64
TSC2-204ENST00000401874 ZNF462Q96JM2 2506 aa11.05□□□□□ -0.64
TSC2-204ENST00000401874 IGFL1Q6UW32 110 aa11.04□□□□□ -0.64
TSC2-204ENST00000401874 BRCA2P51587 3418 aa11.04□□□□□ -0.64
TSC2-204ENST00000401874 MRPL34Q9BQ48 92 aaKnown RBP11.03□□□□□ -0.64
TSC2-204ENST00000401874 Q8N377 158 aa11.03□□□□□ -0.64
TSC2-204ENST00000401874 PLA2G2DQ9UNK4 145 aa11.03□□□□□ -0.64
TSC2-204ENST00000401874 C9orf129Q5T035 196 aaKnown RBP11.02□□□□□ -0.65
TSC2-204ENST00000401874 TLX1NBP0CAT3 122 aa11.01□□□□□ -0.65
TSC2-204ENST00000401874 LINC01600Q96MT4 127 aa11.01□□□□□ -0.65
TSC2-204ENST00000401874 CYP4F30PQ9H0H9 118 aa11.01□□□□□ -0.65
TSC2-204ENST00000401874 COA5Q86WW8 74 aa11.01□□□□□ -0.65
TSC2-204ENST00000401874 FAM229AH3BQW9 127 aa11□□□□□ -0.65
TSC2-204ENST00000401874 ZNF575Q86XF7 245 aa10.99□□□□□ -0.65
TSC2-204ENST00000401874 ANKRD17O75179 2603 aaKnown RBP10.99□□□□□ -0.65
TSC2-204ENST00000401874 PRR15Q8IV56 129 aa10.99□□□□□ -0.65
TSC2-204ENST00000401874 H7BZZ5 65 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms