RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 TMEM170BQ5T4T1 132 aa4.78□□□□□ -1.64
USP16-204ENST00000399976 F8W1H4 67 aa4.77□□□□□ -1.65
USP16-204ENST00000399976 SPINK8P0C7L1 97 aa4.77□□□□□ -1.65
USP16-204ENST00000399976 SMIM13P0DJ93 91 aa4.77□□□□□ -1.65
USP16-204ENST00000399976 FABP2P12104 132 aa4.77□□□□□ -1.65
USP16-204ENST00000399976 UNQ6190/PRO20217Q6UXQ8 127 aa4.77□□□□□ -1.65
USP16-204ENST00000399976 A0A096LNI7 61 aa4.77□□□□□ -1.65
USP16-204ENST00000399976 SCXQ7RTU7 201 aa4.76□□□□□ -1.65
USP16-204ENST00000399976 SPCS1Q9Y6A9 102 aa4.76□□□□□ -1.65
USP16-204ENST00000399976 H3BUT2 72 aa4.76□□□□□ -1.65
USP16-204ENST00000399976 C10orf25Q5T742 122 aa4.76□□□□□ -1.65
USP16-204ENST00000399976 CIRBP-AS1Q8TBR5 109 aa4.76□□□□□ -1.65
USP16-204ENST00000399976 ERG28Q9UKR5 140 aa4.76□□□□□ -1.65
USP16-204ENST00000399976 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.76□□□□□ -1.65
USP16-204ENST00000399976 PKHD1P08F94 4074 aa4.75□□□□□ -1.65
USP16-204ENST00000399976 J3QQQ9 107 aa4.75□□□□□ -1.65
USP16-204ENST00000399976 PLA2G1BP04054 148 aaKnown RBP4.75□□□□□ -1.65
USP16-204ENST00000399976 FAM30AQ9NZY2 134 aa4.75□□□□□ -1.65
USP16-204ENST00000399976 APOBP04114 4563 aaKnown RBP4.75□□□□□ -1.65
USP16-204ENST00000399976 LRP1BQ9NZR2 4599 aa4.75□□□□□ -1.65
USP16-204ENST00000399976 Q6ZRP5 223 aa4.75□□□□□ -1.65
USP16-204ENST00000399976 CEND1Q8N111 149 aa4.75□□□□□ -1.65
USP16-204ENST00000399976 COPS9Q8WXC6 57 aa4.74□□□□□ -1.65
USP16-204ENST00000399976 LINC00526Q96FQ7 95 aa4.74□□□□□ -1.65
USP16-204ENST00000399976 J3QR89 54 aa4.74□□□□□ -1.65
USP16-204ENST00000399976 SPANXB1Q9NS25 103 aaPredicted RBP4.74□□□□□ -1.65
USP16-204ENST00000399976 NDUFA12Q9UI09 145 aa4.74□□□□□ -1.65
USP16-204ENST00000399976 EPPK1P58107 5090 aaKnown RBP4.74□□□□□ -1.65
USP16-204ENST00000399976 A0A087WYN8 130 aa4.74□□□□□ -1.65
USP16-204ENST00000399976 FAM229AH3BQW9 127 aa4.74□□□□□ -1.65
USP16-204ENST00000399976 NDUFC2O95298 119 aa4.74□□□□□ -1.65
USP16-204ENST00000399976 LGALS3P17931 250 aaKnown RBP4.74□□□□□ -1.65
USP16-204ENST00000399976 KRTAP10-4P60372 401 aaPredicted RBP4.74□□□□□ -1.65
USP16-204ENST00000399976 C2orf82Q6UX34 121 aa4.74□□□□□ -1.65
USP16-204ENST00000399976 PCP2Q8IVA1 136 aa4.74□□□□□ -1.65
USP16-204ENST00000399976 C7orf33Q8WU49 177 aa4.74□□□□□ -1.65
USP16-204ENST00000399976 TOMM7Q9P0U1 55 aa4.74□□□□□ -1.65
USP16-204ENST00000399976 PRO0461Q9UI25 63 aa4.73□□□□□ -1.65
USP16-204ENST00000399976 VPS13BQ7Z7G8 4022 aa4.73□□□□□ -1.65
USP16-204ENST00000399976 IGKV2D-26A0A0A0MRZ7 120 aa4.73□□□□□ -1.65
USP16-204ENST00000399976 TRBV10-2A0A0K0K1G8 114 aa4.73□□□□□ -1.65
USP16-204ENST00000399976 RPL24P83731 157 aaKnown RBP4.73□□□□□ -1.65
USP16-204ENST00000399976 C9orf129Q5T035 196 aaKnown RBP4.73□□□□□ -1.65
USP16-204ENST00000399976 SIGMAR1Q99720 223 aa4.73□□□□□ -1.65
USP16-204ENST00000399976 M0QXV9 152 aa4.72□□□□□ -1.65
USP16-204ENST00000399976 FXYD2P54710 66 aa4.72□□□□□ -1.65
USP16-204ENST00000399976 RPL18AQ02543 176 aaKnown RBP4.72□□□□□ -1.65
USP16-204ENST00000399976 LINC01600Q96MT4 127 aa4.72□□□□□ -1.65
USP16-204ENST00000399976 PKHD1L1Q86WI1 4243 aa4.72□□□□□ -1.65
USP16-204ENST00000399976 PANO1I0J062 215 aa4.72□□□□□ -1.65
USP16-204ENST00000399976 SPANXDQ9BXN6 97 aa4.72□□□□□ -1.65
USP16-204ENST00000399976 SPANXCQ9NY87 97 aa4.72□□□□□ -1.65
USP16-204ENST00000399976 IFITM1P13164 125 aa4.71□□□□□ -1.66
USP16-204ENST00000399976 TSPEAR-AS2P59090 65 aa4.71□□□□□ -1.66
USP16-204ENST00000399976 LINC00528Q8N1L1 170 aa4.71□□□□□ -1.66
USP16-204ENST00000399976 MTURNQ8N3F0 131 aa4.71□□□□□ -1.66
USP16-204ENST00000399976 H0Y8G0 127 aa4.71□□□□□ -1.66
USP16-204ENST00000399976 SND1-IT1Q9HBX3 110 aa4.71□□□□□ -1.66
USP16-204ENST00000399976 GAGE2BQ13066 116 aa4.7□□□□□ -1.66
USP16-204ENST00000399976 C9orf116Q5BN46 136 aaPredicted RBP4.7□□□□□ -1.66
USP16-204ENST00000399976 H3BMG7 143 aa4.7□□□□□ -1.66
USP16-204ENST00000399976 VPREB1P12018 145 aa4.7□□□□□ -1.66
USP16-204ENST00000399976 MEIG1Q5JSS6 88 aa4.7□□□□□ -1.66
USP16-204ENST00000399976 KRTAP7-1Q8IUC3 87 aa4.7□□□□□ -1.66
USP16-204ENST00000399976 LITAFQ99732 161 aa4.7□□□□□ -1.66
USP16-204ENST00000399976 RYR1P21817 5038 aa4.69□□□□□ -1.66
USP16-204ENST00000399976 HSPG2P98160 4391 aa4.69□□□□□ -1.66
USP16-204ENST00000399976 A0A1B0GV72 72 aa4.69□□□□□ -1.66
USP16-204ENST00000399976 A0A1W2PNN7 141 aa4.69□□□□□ -1.66
USP16-204ENST00000399976 RPL37AP61513 92 aaKnown RBP4.69□□□□□ -1.66
USP16-204ENST00000399976 PRR3P79522 188 aaKnown RBP4.69□□□□□ -1.66
USP16-204ENST00000399976 HERC2O95714 4834 aa4.69□□□□□ -1.66
USP16-204ENST00000399976 H0Y9J4 135 aa4.69□□□□□ -1.66
USP16-204ENST00000399976 Q5VSD8 79 aa4.69□□□□□ -1.66
USP16-204ENST00000399976 CHTF8P0CG12 524 aa4.68□□□□□ -1.66
USP16-204ENST00000399976 LINC01620Q4KN68 170 aa4.68□□□□□ -1.66
USP16-204ENST00000399976 MRPL55Q7Z7F7 128 aaKnown RBP4.68□□□□□ -1.66
USP16-204ENST00000399976 M0R378 163 aa4.68□□□□□ -1.66
USP16-204ENST00000399976 FUSP35637 526 aaKnown RBP eCLIP4.68□□□□□ -1.66
USP16-204ENST00000399976 LCE2DQ5TA82 110 aaPredicted RBP4.68□□□□□ -1.66
USP16-204ENST00000399976 RAB37Q96AX2 223 aa4.68□□□□□ -1.66
USP16-204ENST00000399976 IGKV2-24A0A0C4DH68 120 aa4.67□□□□□ -1.66
USP16-204ENST00000399976 PRYO14603 147 aa4.67□□□□□ -1.66
USP16-204ENST00000399976 LYRM7Q5U5X0 104 aa4.67□□□□□ -1.66
USP16-204ENST00000399976 SPINK6Q6UWN8 80 aa4.67□□□□□ -1.66
USP16-204ENST00000399976 NHP2Q9NX24 153 aaKnown RBP4.67□□□□□ -1.66
USP16-204ENST00000399976 C22orf24Q9Y442 160 aa4.67□□□□□ -1.66
USP16-204ENST00000399976 ZNF815PA8K554 130 aa4.67□□□□□ -1.66
USP16-204ENST00000399976 SRSF9Q13242 221 aaKnown RBP eCLIP4.67□□□□□ -1.66
USP16-204ENST00000399976 TRBV20-1A0A075B6N2 111 aa4.66□□□□□ -1.66
USP16-204ENST00000399976 OXTP01178 125 aa4.66□□□□□ -1.66
USP16-204ENST00000399976 SPRR1AP35321 89 aa4.66□□□□□ -1.66
USP16-204ENST00000399976 LINC00158P58513 81 aa4.66□□□□□ -1.66
USP16-204ENST00000399976 GAGE2EQ4V326 116 aa4.66□□□□□ -1.66
USP16-204ENST00000399976 GAGE2DQ9UEU5 116 aa4.66□□□□□ -1.66
USP16-204ENST00000399976 IGLV1-50A0A075B6I6 118 aa4.66□□□□□ -1.66
USP16-204ENST00000399976 SERTAD4-AS1Q5TG53 156 aa4.66□□□□□ -1.66
USP16-204ENST00000399976 MIR7-3HGQ8N6C7 128 aa4.66□□□□□ -1.66
USP16-204ENST00000399976 NKAPP1Q8N9T2 125 aa4.66□□□□□ -1.66
USP16-204ENST00000399976 KCNQ1DNQ9H478 68 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms