RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 C2orf48Q96LS8 159 aa13.21□□□□□ -0.29
COL13A1-205ENST00000398978 hADV29S1A0JD25 119 aa13.21□□□□□ -0.3
COL13A1-205ENST00000398978 COX17Q14061 63 aa13.2□□□□□ -0.3
COL13A1-205ENST00000398978 Q6JHZ5 121 aa13.2□□□□□ -0.3
COL13A1-205ENST00000398978 NDUFC2O95298 119 aa13.19□□□□□ -0.3
COL13A1-205ENST00000398978 COX7CP15954 63 aa13.19□□□□□ -0.3
COL13A1-205ENST00000398978 APOC4P55056 127 aa13.19□□□□□ -0.3
COL13A1-205ENST00000398978 M0R2N4 97 aa13.19□□□□□ -0.3
COL13A1-205ENST00000398978 TMEM256-PLSCR3K7ERE1 68 aa13.18□□□□□ -0.3
COL13A1-205ENST00000398978 LINC00167Q96N53 147 aa13.18□□□□□ -0.3
COL13A1-205ENST00000398978 ENHOQ6UWT2 76 aa13.18□□□□□ -0.3
COL13A1-205ENST00000398978 LOC107984640A0A0U1RRK4 108 aa13.17□□□□□ -0.3
COL13A1-205ENST00000398978 HIGD2BQ4VC39 106 aa13.17□□□□□ -0.3
COL13A1-205ENST00000398978 FAM19A1Q7Z5A9 133 aa13.17□□□□□ -0.3
COL13A1-205ENST00000398978 LINC00575Q6W349 94 aa13.16□□□□□ -0.3
COL13A1-205ENST00000398978 RETNQ9HD89 108 aa13.16□□□□□ -0.3
COL13A1-205ENST00000398978 SPART-AS1P0CW21 52 aa13.16□□□□□ -0.3
COL13A1-205ENST00000398978 LAMTOR3Q9UHA4 124 aa13.16□□□□□ -0.3
COL13A1-205ENST00000398978 TENM3Q9P273 2699 aa13.15□□□□□ -0.3
COL13A1-205ENST00000398978 ATOX1O00244 68 aa13.15□□□□□ -0.3
COL13A1-205ENST00000398978 IGHV4-30-4P0DP06 118 aa13.15□□□□□ -0.3
COL13A1-205ENST00000398978 USP17L23D6RBM5 183 aa13.14□□□□□ -0.31
COL13A1-205ENST00000398978 LELP1Q5T871 98 aa13.14□□□□□ -0.31
COL13A1-205ENST00000398978 JMJD7-PLA2G4BH0Y9G9 81 aa13.14□□□□□ -0.31
COL13A1-205ENST00000398978 TRAV23DV6A0A075B6W5 121 aa13.13□□□□□ -0.31
COL13A1-205ENST00000398978 C6orf48Q9UBA6 75 aa13.13□□□□□ -0.31
COL13A1-205ENST00000398978 TRBV10-3A0A0K0K1G6 114 aa13.13□□□□□ -0.31
COL13A1-205ENST00000398978 Q6ZQY7 126 aa13.12□□□□□ -0.31
COL13A1-205ENST00000398978 ANK2Q01484 3957 aa13.12□□□□□ -0.31
COL13A1-205ENST00000398978 WFDC10BQ8IUB3 73 aa13.11□□□□□ -0.31
COL13A1-205ENST00000398978 MIFP14174 115 aa13.11□□□□□ -0.31
COL13A1-205ENST00000398978 KMT2BQ9UMN6 2715 aaPredicted RBP13.1□□□□□ -0.31
COL13A1-205ENST00000398978 LYPD5Q6UWN5 251 aa13.1□□□□□ -0.31
COL13A1-205ENST00000398978 RBM3P98179 157 aaKnown RBP13.09□□□□□ -0.31
COL13A1-205ENST00000398978 PRR34Q9NV39 138 aa13.08□□□□□ -0.32
COL13A1-205ENST00000398978 A0A0J9YWU9 116 aa13.07□□□□□ -0.32
COL13A1-205ENST00000398978 IGLV6-57P01721 117 aa13.07□□□□□ -0.32
COL13A1-205ENST00000398978 OXLD1Q5BKU9 147 aa13.06□□□□□ -0.32
COL13A1-205ENST00000398978 STAB1Q9NY15 2570 aa13.06□□□□□ -0.32
COL13A1-205ENST00000398978 Q6ZQT0 140 aa13.05□□□□□ -0.32
COL13A1-205ENST00000398978 SERP2Q8N6R1 65 aa13.05□□□□□ -0.32
COL13A1-205ENST00000398978 CRYGAP11844 174 aa13.04□□□□□ -0.32
COL13A1-205ENST00000398978 UBL5Q9BZL1 73 aa13.04□□□□□ -0.32
COL13A1-205ENST00000398978 GHRHP01286 108 aa13.04□□□□□ -0.32
COL13A1-205ENST00000398978 HAMPP81172 84 aa13.04□□□□□ -0.32
COL13A1-205ENST00000398978 CAMK2N2Q96S95 79 aa13.03□□□□□ -0.32
COL13A1-205ENST00000398978 NOTCH1P46531 2555 aa13.03□□□□□ -0.32
COL13A1-205ENST00000398978 FLNBO75369 2602 aaKnown RBP13.03□□□□□ -0.32
COL13A1-205ENST00000398978 ZNF561-AS1K7EIQ3 104 aa13.02□□□□□ -0.32
COL13A1-205ENST00000398978 KPRPQ5T749 579 aaPredicted RBP13.02□□□□□ -0.33
COL13A1-205ENST00000398978 UPK3BQ9BT76 320 aa13.02□□□□□ -0.33
COL13A1-205ENST00000398978 Q6ZTC4 211 aa13.02□□□□□ -0.33
COL13A1-205ENST00000398978 MAST4O15021 2626 aa13.01□□□□□ -0.33
COL13A1-205ENST00000398978 SCXQ7RTU7 201 aa13.01□□□□□ -0.33
COL13A1-205ENST00000398978 Q6ZRU5 148 aa13□□□□□ -0.33
COL13A1-205ENST00000398978 DIRC1Q969H9 104 aa13□□□□□ -0.33
COL13A1-205ENST00000398978 C5orf47Q569G3 176 aa13□□□□□ -0.33
COL13A1-205ENST00000398978 ZNF73O43830 326 aaPredicted RBP12.99□□□□□ -0.33
COL13A1-205ENST00000398978 DSCR8Q96T75 97 aa12.99□□□□□ -0.33
COL13A1-205ENST00000398978 F8P00451 2351 aa12.98□□□□□ -0.33
COL13A1-205ENST00000398978 FBN1P35555 2871 aaKnown RBP12.97□□□□□ -0.33
COL13A1-205ENST00000398978 COX7BP24311 80 aa12.95□□□□□ -0.34
COL13A1-205ENST00000398978 Q6ZVQ6 151 aa12.95□□□□□ -0.34
COL13A1-205ENST00000398978 LINC01547P58512 204 aaPredicted RBP12.94□□□□□ -0.34
COL13A1-205ENST00000398978 ESRGQ1W209 222 aa12.94□□□□□ -0.34
COL13A1-205ENST00000398978 VPREB1P12018 145 aa12.94□□□□□ -0.34
COL13A1-205ENST00000398978 KRTAP10-11P60412 298 aa12.94□□□□□ -0.34
COL13A1-205ENST00000398978 GVQW2A0A096LPI5 108 aaPredicted RBP12.94□□□□□ -0.34
COL13A1-205ENST00000398978 C15orf56Q8N910 161 aa12.94□□□□□ -0.34
COL13A1-205ENST00000398978 IGKV2D-24A0A075B6R9 120 aa12.92□□□□□ -0.34
COL13A1-205ENST00000398978 MUC7Q8TAX7 377 aa12.92□□□□□ -0.34
COL13A1-205ENST00000398978 KRTAP26-1Q6PEX3 210 aa12.92□□□□□ -0.34
COL13A1-205ENST00000398978 FAM19A5Q7Z5A7 132 aaPredicted RBP12.92□□□□□ -0.34
COL13A1-205ENST00000398978 C20orf197Q8N268 126 aa12.92□□□□□ -0.34
COL13A1-205ENST00000398978 LOC110117498A0A087WWA1 95 aa12.92□□□□□ -0.34
COL13A1-205ENST00000398978 ATP5EP2Q5VTU8 51 aa12.91□□□□□ -0.34
COL13A1-205ENST00000398978 TRAV10A0A0B4J240 114 aa12.91□□□□□ -0.34
COL13A1-205ENST00000398978 Q6ZRP5 223 aa12.9□□□□□ -0.34
COL13A1-205ENST00000398978 BAHCC1Q9P281 2608 aa12.9□□□□□ -0.34
COL13A1-205ENST00000398978 ELOF1P60002 83 aaKnown RBP12.89□□□□□ -0.35
COL13A1-205ENST00000398978 DEFB105AQ8NG35 78 aa12.87□□□□□ -0.35
COL13A1-205ENST00000398978 J3KT08 172 aa12.87□□□□□ -0.35
COL13A1-205ENST00000398978 C1orf43Q9BWL3 253 aa12.87□□□□□ -0.35
COL13A1-205ENST00000398978 OXTP01178 125 aa12.85□□□□□ -0.35
COL13A1-205ENST00000398978 EGFEM1PQ0D2K5 195 aa12.85□□□□□ -0.35
COL13A1-205ENST00000398978 NDUFC2-KCTD14E9PQ53 114 aa12.85□□□□□ -0.35
COL13A1-205ENST00000398978 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.85□□□□□ -0.35
COL13A1-205ENST00000398978 Q8N9L7 120 aa12.85□□□□□ -0.35
COL13A1-205ENST00000398978 M0R378 163 aa12.85□□□□□ -0.35
COL13A1-205ENST00000398978 DPH3Q96FX2 82 aa12.85□□□□□ -0.35
COL13A1-205ENST00000398978 TRBV7-4A0A0J9YYF1 115 aa12.82□□□□□ -0.36
COL13A1-205ENST00000398978 TMEM258P61165 79 aa12.82□□□□□ -0.36
COL13A1-205ENST00000398978 SNURFQ9Y675 71 aa12.82□□□□□ -0.36
COL13A1-205ENST00000398978 SERTAD4-AS1Q5TG53 156 aa12.82□□□□□ -0.36
COL13A1-205ENST00000398978 DEFB131BA0A096LNP1 70 aa12.81□□□□□ -0.36
COL13A1-205ENST00000398978 LINC00528Q8N1L1 170 aa12.81□□□□□ -0.36
COL13A1-205ENST00000398978 COL6A5A8TX70 2615 aa12.8□□□□□ -0.36
COL13A1-205ENST00000398978 PRB2P02812 416 aaPredicted RBP12.8□□□□□ -0.36
COL13A1-205ENST00000398978 RPL37AP8A6NKH3 93 aa12.8□□□□□ -0.36
COL13A1-205ENST00000398978 CMYA5Q8N3K9 4069 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms