RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PSPHP1O15172 72 aa9.86□□□□□ -0.83
PCDHA11-201ENST00000398640 CRYGAP11844 174 aa9.85□□□□□ -0.83
PCDHA11-201ENST00000398640 KIAA0087Q14695 138 aa9.85□□□□□ -0.83
PCDHA11-201ENST00000398640 ABCA12Q86UK0 2595 aa9.85□□□□□ -0.83
PCDHA11-201ENST00000398640 C11orf72Q8NBR9 251 aa9.85□□□□□ -0.83
PCDHA11-201ENST00000398640 Q9UF83 564 aa9.85□□□□□ -0.83
PCDHA11-201ENST00000398640 K7EIL1 84 aa9.84□□□□□ -0.83
PCDHA11-201ENST00000398640 PHF5AQ7RTV0 110 aaKnown RBP9.84□□□□□ -0.83
PCDHA11-201ENST00000398640 SMIM26A0A096LP01 95 aa9.84□□□□□ -0.83
PCDHA11-201ENST00000398640 NBDYA0A0U1RRE5 68 aa9.83□□□□□ -0.84
PCDHA11-201ENST00000398640 C7orf65Q6ZTY9 151 aa9.83□□□□□ -0.84
PCDHA11-201ENST00000398640 KRTAP10-11P60412 298 aa9.82□□□□□ -0.84
PCDHA11-201ENST00000398640 LINC00846Q9NV44 126 aa9.81□□□□□ -0.84
PCDHA11-201ENST00000398640 LINC00167Q96N53 147 aa9.81□□□□□ -0.84
PCDHA11-201ENST00000398640 C1orf195Q5TG92 126 aa9.81□□□□□ -0.84
PCDHA11-201ENST00000398640 TYMSOSQ8TAI1 123 aa9.81□□□□□ -0.84
PCDHA11-201ENST00000398640 PMAIP1Q13794 54 aa9.8□□□□□ -0.84
PCDHA11-201ENST00000398640 H3BNG1 76 aa9.8□□□□□ -0.84
PCDHA11-201ENST00000398640 KRTAP10-3P60369 221 aa9.8□□□□□ -0.84
PCDHA11-201ENST00000398640 EPG5Q9HCE0 2579 aa9.8□□□□□ -0.84
PCDHA11-201ENST00000398640 KRTAP1-1Q07627 177 aa9.79□□□□□ -0.84
PCDHA11-201ENST00000398640 C1orf64Q8NEQ6 169 aa9.79□□□□□ -0.84
PCDHA11-201ENST00000398640 C6orf48Q9UBA6 75 aa9.79□□□□□ -0.84
PCDHA11-201ENST00000398640 KIF25-AS1Q9Y6Z4 181 aa9.79□□□□□ -0.84
PCDHA11-201ENST00000398640 ANKRD17O75179 2603 aaKnown RBP9.78□□□□□ -0.84
PCDHA11-201ENST00000398640 PLA2G1BP04054 148 aaKnown RBP9.78□□□□□ -0.84
PCDHA11-201ENST00000398640 MUC4Q99102 2169 aa9.78□□□□□ -0.84
PCDHA11-201ENST00000398640 SMIM29Q86T20 159 aa9.78□□□□□ -0.84
PCDHA11-201ENST00000398640 LINC00588Q9Y4M8 146 aa9.77□□□□□ -0.85
PCDHA11-201ENST00000398640 Q8NAQ8 132 aa9.76□□□□□ -0.85
PCDHA11-201ENST00000398640 TMEM254Q8TBM7 123 aa9.76□□□□□ -0.85
PCDHA11-201ENST00000398640 hDV103S1A0JD37 113 aa9.75□□□□□ -0.85
PCDHA11-201ENST00000398640 RPL37AP61513 92 aaKnown RBP9.75□□□□□ -0.85
PCDHA11-201ENST00000398640 Q6ZRP5 223 aa9.75□□□□□ -0.85
PCDHA11-201ENST00000398640 LINC01546A6NGU7 62 aa9.74□□□□□ -0.85
PCDHA11-201ENST00000398640 IGHV3OR16-9A0A0B4J2B5 98 aa9.74□□□□□ -0.85
PCDHA11-201ENST00000398640 IGLV5-39A0A0G2JS06 123 aa9.73□□□□□ -0.85
PCDHA11-201ENST00000398640 USP9XQ93008 2570 aaPredicted RBP9.73□□□□□ -0.85
PCDHA11-201ENST00000398640 F8P00451 2351 aa9.72□□□□□ -0.85
PCDHA11-201ENST00000398640 TLN2Q9Y4G6 2542 aa9.71□□□□□ -0.85
PCDHA11-201ENST00000398640 FAM19A4Q96LR4 140 aa9.71□□□□□ -0.85
PCDHA11-201ENST00000398640 C19orf73Q9NVV2 129 aa9.7□□□□□ -0.86
PCDHA11-201ENST00000398640 FN1P02751 2386 aaKnown RBP9.7□□□□□ -0.86
PCDHA11-201ENST00000398640 EPM2AB3EWF7 344 aa9.68□□□□□ -0.86
PCDHA11-201ENST00000398640 CXCL6P80162 114 aa9.68□□□□□ -0.86
PCDHA11-201ENST00000398640 COX6B2Q6YFQ2 88 aa9.68□□□□□ -0.86
PCDHA11-201ENST00000398640 DNAH12Q6ZR08 3092 aa9.68□□□□□ -0.86
PCDHA11-201ENST00000398640 ST20-AS1Q8NBB2 130 aa9.67□□□□□ -0.86
PCDHA11-201ENST00000398640 KLK9Q2XQG4 91 aa9.67□□□□□ -0.86
PCDHA11-201ENST00000398640 FAM218AQ96MZ4 157 aa9.67□□□□□ -0.86
PCDHA11-201ENST00000398640 Q96NJ1 140 aa9.66□□□□□ -0.86
PCDHA11-201ENST00000398640 CEP350Q5VT06 3117 aa9.65□□□□□ -0.86
PCDHA11-201ENST00000398640 A0A1B0GU69 56 aa9.65□□□□□ -0.86
PCDHA11-201ENST00000398640 LINC00476Q8WZB0 136 aa9.65□□□□□ -0.86
PCDHA11-201ENST00000398640 SMR3BP02814 79 aaPredicted RBP9.65□□□□□ -0.86
PCDHA11-201ENST00000398640 LINC00313P59037 77 aa9.65□□□□□ -0.87
PCDHA11-201ENST00000398640 DNAH10OSP0CZ25 163 aa9.64□□□□□ -0.87
PCDHA11-201ENST00000398640 ELOF1P60002 83 aaKnown RBP9.64□□□□□ -0.87
PCDHA11-201ENST00000398640 ATP11AUNQ6ZP68 121 aa9.64□□□□□ -0.87
PCDHA11-201ENST00000398640 Q8NBF4 154 aa9.64□□□□□ -0.87
PCDHA11-201ENST00000398640 USP9YO00507 2555 aaPredicted RBP9.63□□□□□ -0.87
PCDHA11-201ENST00000398640 POLQO75417 2590 aa9.63□□□□□ -0.87
PCDHA11-201ENST00000398640 IGLV5-45A0A087WSX0 123 aa9.62□□□□□ -0.87
PCDHA11-201ENST00000398640 TM2D3Q9BRN9 247 aa9.62□□□□□ -0.87
PCDHA11-201ENST00000398640 Q6ZRX8 168 aa9.62□□□□□ -0.87
PCDHA11-201ENST00000398640 IGLV8-61A0A075B6I0 122 aa9.61□□□□□ -0.87
PCDHA11-201ENST00000398640 FAM168BA1KXE4 195 aa9.61□□□□□ -0.87
PCDHA11-201ENST00000398640 ACYP2P14621 99 aa9.61□□□□□ -0.87
PCDHA11-201ENST00000398640 CDIP1Q9H305 208 aa9.6□□□□□ -0.87
PCDHA11-201ENST00000398640 SPAG11AQ6PDA7 123 aa9.6□□□□□ -0.87
PCDHA11-201ENST00000398640 TP53AIP1Q9HCN2 124 aa9.59□□□□□ -0.87
PCDHA11-201ENST00000398640 ACANP16112 2415 aa9.58□□□□□ -0.88
PCDHA11-201ENST00000398640 BCE1O60756 84 aa9.58□□□□□ -0.88
PCDHA11-201ENST00000398640 HECTD1Q9ULT8 2610 aa9.57□□□□□ -0.88
PCDHA11-201ENST00000398640 SMCPP49901 116 aaPredicted RBP9.55□□□□□ -0.88
PCDHA11-201ENST00000398640 A0A1B0GW54 56 aa9.55□□□□□ -0.88
PCDHA11-201ENST00000398640 CSNK1G2-AS1Q8NCQ2 148 aa9.55□□□□□ -0.88
PCDHA11-201ENST00000398640 Q6ZQT0 140 aa9.54□□□□□ -0.88
PCDHA11-201ENST00000398640 LINC00336Q6ZUF6 198 aa9.54□□□□□ -0.88
PCDHA11-201ENST00000398640 C9orf92A6NGG3 77 aa9.54□□□□□ -0.88
PCDHA11-201ENST00000398640 GVQW2A0A096LPI5 108 aaPredicted RBP9.54□□□□□ -0.88
PCDHA11-201ENST00000398640 MTORP42345 2549 aa9.53□□□□□ -0.88
PCDHA11-201ENST00000398640 SERTAD4-AS1Q5TG53 156 aa9.5□□□□□ -0.89
PCDHA11-201ENST00000398640 FLNBO75369 2602 aaKnown RBP9.48□□□□□ -0.89
PCDHA11-201ENST00000398640 TRAV22A0A0B4J277 110 aa9.48□□□□□ -0.89
PCDHA11-201ENST00000398640 CHD7Q9P2D1 2997 aa9.48□□□□□ -0.89
PCDHA11-201ENST00000398640 SETD2Q9BYW2 2564 aaPredicted RBP9.48□□□□□ -0.89
PCDHA11-201ENST00000398640 LINC00304Q8N9R0 145 aa9.47□□□□□ -0.89
PCDHA11-201ENST00000398640 LOC110117498A0A087WWA1 95 aa9.46□□□□□ -0.9
PCDHA11-201ENST00000398640 PRO0461Q9UI25 63 aa9.45□□□□□ -0.9
PCDHA11-201ENST00000398640 APLNQ9ULZ1 77 aa9.45□□□□□ -0.9
PCDHA11-201ENST00000398640 HTTP42858 3142 aa9.45□□□□□ -0.9
PCDHA11-201ENST00000398640 VPREB1P12018 145 aa9.44□□□□□ -0.9
PCDHA11-201ENST00000398640 C4orf26Q17RF5 130 aa9.44□□□□□ -0.9
PCDHA11-201ENST00000398640 A0A087WTM6 91 aa9.43□□□□□ -0.9
PCDHA11-201ENST00000398640 DSCR10P59022 87 aa9.43□□□□□ -0.9
PCDHA11-201ENST00000398640 TRBV7-4A0A0J9YYF1 115 aa9.42□□□□□ -0.9
PCDHA11-201ENST00000398640 K7EQZ3 153 aa9.42□□□□□ -0.9
PCDHA11-201ENST00000398640 CHD9Q3L8U1 2897 aa9.41□□□□□ -0.9
PCDHA11-201ENST00000398640 IGLV1-50A0A075B6I6 118 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms