RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 DEFB4AO15263 64 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 TSHBP01222 138 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 CDC42SE2Q9NRR3 84 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 TRAV7A0A075B6U4 112 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 Q6ZSN1 163 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 IGHV6-1A0A0B4J1U7 121 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 WIPF1O43516 503 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 LYPD5Q6UWN5 251 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 BBC3Q96PG8 261 aaPredicted RBP1.94□□□□□ -2.1
CHD9-202ENST00000398510 AMELXQ99217 191 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 IGLV4-60A0A075B6I1 120 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 RNASE3P12724 160 aaKnown RBP1.94□□□□□ -2.1
CHD9-202ENST00000398510 LINC00313P59037 77 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 ATRQ13535 2644 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 K7ERJ3 54 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 ITPR3Q14573 2671 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 ENHOQ6UWT2 76 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 TRIAP1O43715 76 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 Q6ZTC4 211 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 ESM1Q9NQ30 184 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 LINC01546A6NGU7 62 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 CD164Q04900 197 aa1.94□□□□□ -2.1
CHD9-202ENST00000398510 COL6A3P12111 3177 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 SDIM1Q6ZPB5 146 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 C19orf84I3L1E1 186 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 SPINK6Q6UWN8 80 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 ERC2-IT1O76042 136 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 FHL2Q14192 279 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 COX6B2Q6YFQ2 88 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 TYMSOSQ8TAI1 123 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 TMEM254Q8TBM7 123 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 BOD1L1Q8NFC6 3051 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 VPS13CQ709C8 3753 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 IGLV1-50A0A075B6I6 118 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 TRBV7-4A0A0J9YYF1 115 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 MGAM2Q2M2H8 2515 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 A0A1W2PNU3 283 aaPredicted RBP1.93□□□□□ -2.1
CHD9-202ENST00000398510 IGLV2-11P01706 119 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 POLR2KP53803 58 aaKnown RBP1.93□□□□□ -2.1
CHD9-202ENST00000398510 LINC00205P59089 165 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 ELOF1P60002 83 aaKnown RBP1.93□□□□□ -2.1
CHD9-202ENST00000398510 SMIM1B2RUZ4 78 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 ZNF80P51504 273 aaPredicted RBP1.93□□□□□ -2.1
CHD9-202ENST00000398510 CDIP1Q9H305 208 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 PSORS1C2Q9UIG4 136 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 HRNRQ86YZ3 2850 aaPredicted RBP1.93□□□□□ -2.1
CHD9-202ENST00000398510 PATE2Q6UY27 113 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 ZZEF1O43149 2961 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 GCN1Q92616 2671 aaKnown RBP1.93□□□□□ -2.1
CHD9-202ENST00000398510 ZNF292O60281 2723 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 LOC110117498A0A087WWA1 95 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 C10orf142B7Z368 130 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 LINC00526Q96FQ7 95 aa1.93□□□□□ -2.1
CHD9-202ENST00000398510 CSMD1Q96PZ7 3565 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 RTL8CO15255 209 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 PROK1P58294 105 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 SMIM11BQ8TCY0 68 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 C6orf48Q9UBA6 75 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 UBR5O95071 2799 aaPredicted RBP1.92□□□□□ -2.1
CHD9-202ENST00000398510 HRES1P13985 223 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 LINC01547P58512 204 aaPredicted RBP1.92□□□□□ -2.1
CHD9-202ENST00000398510 MLANAQ16655 118 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 LINC00304Q8N9R0 145 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 COX7CP15954 63 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 ODF3L2Q3SX64 289 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 ATMQ13315 3056 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 SMIM26A0A096LP01 95 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 H0Y9P7 68 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 C11orf72Q8NBR9 251 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 GDF5OSQ5U4N7 250 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 FLNBO75369 2602 aaKnown RBP1.92□□□□□ -2.1
CHD9-202ENST00000398510 IGLV2-18A0A075B6J9 118 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 FXYD2P54710 66 aa1.92□□□□□ -2.1
CHD9-202ENST00000398510 DMXL2Q8TDJ6 3036 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 IGKV3D-7A0A0C4DH55 119 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 LINC00483Q53H64 154 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 CCDC179H3BU77 68 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 KRTAP21-3Q3LHN1 58 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 SPRNQ5BIV9 151 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 FLNCQ14315 2725 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 IGLV5-45A0A087WSX0 123 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 X6R8D5 127 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 K7EQZ3 153 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 WISP2O76076 250 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 M0R2N4 97 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 C1orf195Q5TG92 126 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 NBEAL1Q6ZS30 2694 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 ASH1LQ9NR48 2969 aaKnown RBP1.91□□□□□ -2.1
CHD9-202ENST00000398510 LINC00208Q96KT6 92 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 SSBP3-AS1Q7Z2R9 100 aa1.91□□□□□ -2.1
CHD9-202ENST00000398510 MSMPQ1L6U9 139 aa1.9□□□□□ -2.1
CHD9-202ENST00000398510 C2orf91Q6ZV80 131 aa1.9□□□□□ -2.1
CHD9-202ENST00000398510 ZNF581Q9P0T4 197 aa1.9□□□□□ -2.1
CHD9-202ENST00000398510 IGLV5-39A0A0G2JS06 123 aa1.9□□□□□ -2.1
CHD9-202ENST00000398510 IGIPA6NJ69 53 aa1.9□□□□□ -2.1
CHD9-202ENST00000398510 A0A1B0GU69 56 aa1.9□□□□□ -2.11
CHD9-202ENST00000398510 AVPP01185 164 aa1.9□□□□□ -2.11
CHD9-202ENST00000398510 PRO0628Q9UI54 55 aa1.9□□□□□ -2.11
CHD9-202ENST00000398510 TLX1NBP0CAT3 122 aa1.9□□□□□ -2.11
CHD9-202ENST00000398510 BRWD1-AS2P59051 145 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms